RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO2, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO2	YMR183C	HSP82	P02829	709 aa	Known RBP	4.22	□□□□□ -1.73
SSO2	YMR183C	PHO3	P24031	467 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	NTH1	P32356	751 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	PAH1	P32567	862 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	SLC1	P33333	303 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	APM3	P38153	483 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	COS111	P38308	924 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	KSP1	P38691	1029 aa	Known RBP	4.22	□□□□□ -1.73
SSO2	YMR183C	MUP3	P38734	546 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	YEL068C	P39977	110 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	KHA1	P40309	873 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	SMK1	P41808	388 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	YNL162W-A	Q3E7A8	72 aa		4.22	□□□□□ -1.73
SSO2	YMR183C	AAC3	P18238	307 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	HOP1	P20050	605 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	SEC65	P29478	273 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	MSS1	P32559	526 aa	Predicted RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	ANP1	P32629	500 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	RPT3	P33298	428 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	NOP4	P37838	685 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	YHR097C	P38809	366 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	PAC2	P39937	518 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	MRK1	P50873	501 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	SPC98	P53540	846 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	RCR2	Q03446	210 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	YLR287C	Q05881	355 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	IRC3	Q06683	689 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	IMH1	Q06704	911 aa	Known RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	SCM3	Q12334	223 aa		4.21	□□□□□ -1.74
SSO2	YMR183C	HSH49	Q99181	213 aa	Predicted RBP	4.21	□□□□□ -1.74
SSO2	YMR183C	INO80	P53115	1489 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	RPS9B	P05755	195 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	SWI6	P09959	803 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	PRP22	P24384	1145 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	XRS2	P33301	854 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	YMC2	P38087	329 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	FAT1	P38225	669 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	NOP16	P40007	231 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	YIL092W	P40497	633 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	GPD2	P41911	440 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	UPF3	P48412	387 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	ARC35	P53731	342 aa	Known RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	TIM50	Q02776	476 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	YKU80	Q04437	629 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	YPS7	Q06325	596 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	PSR1	Q07800	427 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	RRG1	Q12167	365 aa	Predicted RBP	4.2	□□□□□ -1.74
SSO2	YMR183C	TAH18	Q12181	623 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	ARP7	Q12406	477 aa		4.2	□□□□□ -1.74
SSO2	YMR183C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SSO2	YMR183C	IME1	P21190	360 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	ATP12	P22135	325 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	CMK1	P27466	446 aa	Known RBP	4.19	□□□□□ -1.74
SSO2	YMR183C	RAD16	P31244	790 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	ECM32	P32644	1121 aa	Known RBP	4.19	□□□□□ -1.74
SSO2	YMR183C	DHR2	P36009	735 aa	Predicted RBP	4.19	□□□□□ -1.74
SSO2	YMR183C	SRP72	P38688	640 aa	Known RBP	4.19	□□□□□ -1.74
SSO2	YMR183C	SPC72	P39723	622 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	NMA2	P53204	395 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	YGR016W	P53209	190 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	MRPL19	P53875	158 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	TIM10	P87108	93 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	MRPL13	Q02204	264 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	NSE5	Q03718	556 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	ARA2	Q04212	335 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	CWC2	Q12046	339 aa	Predicted RBP	4.19	□□□□□ -1.74
SSO2	YMR183C	RKI1	Q12189	258 aa		4.19	□□□□□ -1.74
SSO2	YMR183C	CYB2	P00175	591 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	NUC1	P08466	329 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	MET8	P15807	274 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	SDS22	P36047	338 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	AXL2	P38928	823 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	MIT1	P40002	666 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	DPH1	P40487	425 aa	Known RBP	4.18	□□□□□ -1.74
SSO2	YMR183C	BUD8	P41698	603 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	PXA1	P41909	870 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	MAD3	P47074	515 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	SAP4	P53036	818 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	BTN2	P53286	410 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	NOP15	P53927	220 aa	Predicted RBP	4.18	□□□□□ -1.74
SSO2	YMR183C	SYF1	Q04048	859 aa	Predicted RBP	4.18	□□□□□ -1.74
SSO2	YMR183C	PPN1	Q04119	674 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	TAF11	Q04226	346 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	VID22	Q05934	901 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	YCG1	Q06680	1035 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	IZH3	Q07959	543 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	PSF3	Q12146	194 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
SSO2	YMR183C	RPS17A	P02407	136 aa	Known RBP	4.17	□□□□□ -1.74
SSO2	YMR183C	SNF1	P06782	633 aa	Known RBP	4.17	□□□□□ -1.74
SSO2	YMR183C	RPS17B	P14127	136 aa	Known RBP	4.17	□□□□□ -1.74
SSO2	YMR183C	GUK1	P15454	187 aa	Known RBP	4.17	□□□□□ -1.74
SSO2	YMR183C	SPO16	P17122	198 aa		4.17	□□□□□ -1.74
SSO2	YMR183C	YCL049C	P25577	312 aa		4.17	□□□□□ -1.74
SSO2	YMR183C	BRF1	P29056	596 aa		4.17	□□□□□ -1.74
SSO2	YMR183C	SAS3	P34218	831 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 127.2 ms