RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W MAL31P38156 614 aa1.68□□□□□ -2.14
PRP39YML046W HUL5P53119 910 aa1.68□□□□□ -2.14
PRP39YML046W ECM16Q04217 1267 aaKnown RBP1.68□□□□□ -2.14
PRP39YML046W YPS7Q06325 596 aa1.68□□□□□ -2.14
PRP39YML046W PFA4Q12006 378 aa1.68□□□□□ -2.14
PRP39YML046W HMG1P12683 1054 aa1.67□□□□□ -2.14
PRP39YML046W CRZ1P53968 678 aa1.67□□□□□ -2.14
PRP39YML046W SEC18P18759 758 aaKnown RBP1.67□□□□□ -2.14
PRP39YML046W MRPL4P36517 319 aa1.67□□□□□ -2.14
PRP39YML046W DSS1P39112 969 aa1.67□□□□□ -2.14
PRP39YML046W AIM14P53109 570 aa1.67□□□□□ -2.14
PRP39YML046W FMP42Q04991 504 aa1.67□□□□□ -2.14
PRP39YML046W ATG33Q06485 197 aa1.67□□□□□ -2.14
PRP39YML046W GSH2Q08220 491 aa1.67□□□□□ -2.14
PRP39YML046W CRT10Q08226 957 aa1.67□□□□□ -2.14
PRP39YML046W BZZ1P38822 633 aa1.66□□□□□ -2.14
PRP39YML046W YNL144CP53907 740 aa1.66□□□□□ -2.14
PRP39YML046W SND1Q04007 877 aa1.66□□□□□ -2.14
PRP39YML046W COG8Q04632 607 aa1.66□□□□□ -2.14
PRP39YML046W ECM22Q05958 814 aaPredicted RBP1.66□□□□□ -2.14
PRP39YML046W GPN2Q08726 347 aaPredicted RBP1.66□□□□□ -2.14
PRP39YML046W RRI1Q12468 440 aa1.66□□□□□ -2.14
PRP39YML046W TOR1P35169 2470 aa1.66□□□□□ -2.14
PRP39YML046W YPK1P12688 680 aaKnown RBP1.65□□□□□ -2.14
PRP39YML046W CNA1P23287 553 aa1.65□□□□□ -2.14
PRP39YML046W CDS1P38221 457 aa1.65□□□□□ -2.14
PRP39YML046W BFA1P47113 574 aa1.65□□□□□ -2.14
PRP39YML046W APJ1P53940 528 aa1.65□□□□□ -2.14
PRP39YML046W AIM41Q12032 185 aa1.65□□□□□ -2.14
PRP39YML046W MON2P48563 1636 aaPredicted RBP1.65□□□□□ -2.15
PRP39YML046W RPL42AP0CX27 106 aaKnown RBP1.65□□□□□ -2.15
PRP39YML046W RPL42BP0CX28 106 aaKnown RBP1.65□□□□□ -2.15
PRP39YML046W LRO1P40345 661 aa1.65□□□□□ -2.15
PRP39YML046W RAD26P40352 1085 aa1.65□□□□□ -2.15
PRP39YML046W CIR1P42940 261 aa1.65□□□□□ -2.15
PRP39YML046W TAF4P50105 388 aa1.65□□□□□ -2.15
PRP39YML046W MTD1Q02046 320 aaKnown RBP1.65□□□□□ -2.15
PRP39YML046W RAD33Q04231 177 aa1.65□□□□□ -2.15
PRP39YML046W ARR3Q06598 404 aa1.65□□□□□ -2.15
PRP39YML046W YOR389WQ08912 624 aa1.65□□□□□ -2.15
PRP39YML046W PCK1P10963 549 aa1.64□□□□□ -2.15
PRP39YML046W RRT2P38332 387 aa1.64□□□□□ -2.15
PRP39YML046W PRM2P40534 656 aa1.64□□□□□ -2.15
PRP39YML046W MKT1P40850 830 aaKnown RBP1.64□□□□□ -2.15
PRP39YML046W YOR131CQ12486 218 aa1.64□□□□□ -2.15
PRP39YML046W MEF1P25039 761 aa1.63□□□□□ -2.15
PRP39YML046W CPR3P25719 182 aa1.63□□□□□ -2.15
PRP39YML046W EHT1P38295 451 aa1.63□□□□□ -2.15
PRP39YML046W GIN4Q12263 1142 aa1.63□□□□□ -2.15
PRP39YML046W INO80P53115 1489 aa1.63□□□□□ -2.15
PRP39YML046W GDA1P32621 518 aa1.63□□□□□ -2.15
PRP39YML046W YEL068CP39977 110 aa1.63□□□□□ -2.15
PRP39YML046W NSE5Q03718 556 aa1.63□□□□□ -2.15
PRP39YML046W CDC23P16522 626 aa1.62□□□□□ -2.15
PRP39YML046W PCM1P38628 557 aaKnown RBP1.62□□□□□ -2.15
PRP39YML046W YCG1Q06680 1035 aa1.62□□□□□ -2.15
PRP39YML046W LYS21Q12122 440 aaKnown RBP1.62□□□□□ -2.15
PRP39YML046W RPS17AP02407 136 aaKnown RBP1.61□□□□□ -2.15
PRP39YML046W RPS17BP14127 136 aaKnown RBP1.61□□□□□ -2.15
PRP39YML046W GSH1P32477 678 aa1.61□□□□□ -2.15
PRP39YML046W NIC96P34077 839 aa1.61□□□□□ -2.15
PRP39YML046W PCL6P40038 420 aa1.61□□□□□ -2.15
PRP39YML046W ARA2Q04212 335 aa1.61□□□□□ -2.15
PRP39YML046W TAH18Q12181 623 aa1.61□□□□□ -2.15
PRP39YML046W RTC1Q08281 1341 aa1.61□□□□□ -2.15
PRP39YML046W CYB2P00175 591 aa1.6□□□□□ -2.15
PRP39YML046W YML002WP0CF17 737 aa1.6□□□□□ -2.15
PRP39YML046W ERR1P0CX10 437 aa1.6□□□□□ -2.15
PRP39YML046W ERR2P0CX11 437 aa1.6□□□□□ -2.15
PRP39YML046W PCL2P25693 308 aa1.6□□□□□ -2.15
PRP39YML046W YJL193WP39542 402 aa1.6□□□□□ -2.15
PRP39YML046W QRI7P43122 407 aa1.6□□□□□ -2.15
PRP39YML046W COG2P53271 262 aa1.6□□□□□ -2.15
PRP39YML046W YNL092WP53934 400 aa1.6□□□□□ -2.15
PRP39YML046W TLG2Q08144 397 aa1.6□□□□□ -2.15
PRP39YML046W CSR2Q12734 1121 aa1.6□□□□□ -2.15
PRP39YML046W NOP2P40991 618 aaKnown RBP1.6□□□□□ -2.15
PRP39YML046W CUL3P53202 744 aa1.6□□□□□ -2.15
PRP39YML046W BET2P20133 325 aa1.59□□□□□ -2.15
PRP39YML046W LDB16P25587 256 aa1.59□□□□□ -2.15
PRP39YML046W SWI6P09959 803 aa1.58□□□□□ -2.16
PRP39YML046W VPS33P20795 691 aa1.58□□□□□ -2.16
PRP39YML046W CDC5P32562 705 aa1.58□□□□□ -2.16
PRP39YML046W SWH1P35845 1188 aa1.58□□□□□ -2.16
PRP39YML046W MNN2P38069 597 aa1.58□□□□□ -2.16
PRP39YML046W KRE9P39005 276 aa1.58□□□□□ -2.16
PRP39YML046W YJL070CP40361 888 aa1.58□□□□□ -2.16
PRP39YML046W UBP7P40453 1071 aa1.58□□□□□ -2.16
PRP39YML046W YJL107CP42947 387 aa1.58□□□□□ -2.16
PRP39YML046W NOP15P53927 220 aaPredicted RBP1.58□□□□□ -2.16
PRP39YML046W RAD34Q06665 692 aa1.58□□□□□ -2.16
PRP39YML046W YBR298C-AQ8TGK4 73 aa1.58□□□□□ -2.16
PRP39YML046W SFL1P20134 766 aa1.58□□□□□ -2.16
PRP39YML046W RRP43P25359 394 aaPredicted RBP1.58□□□□□ -2.16
PRP39YML046W KES1P35844 434 aaKnown RBP1.58□□□□□ -2.16
PRP39YML046W AVT5P38176 459 aa1.58□□□□□ -2.16
PRP39YML046W ERV46P39727 415 aa1.58□□□□□ -2.16
PRP39YML046W YDL183CP48569 320 aa1.58□□□□□ -2.16
PRP39YML046W SEC1P30619 724 aaKnown RBP1.57□□□□□ -2.16
PRP39YML046W SFP1P32432 683 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms