RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W NSE5Q03718 556 aa9.24□□□□□ -0.93
SFP1YLR403W GFD1Q04839 188 aaKnown RBP9.24□□□□□ -0.93
SFP1YLR403W ARP7Q12406 477 aa9.24□□□□□ -0.93
SFP1YLR403W USO1P25386 1790 aa9.24□□□□□ -0.93
SFP1YLR403W PIF1P07271 859 aa9.24□□□□□ -0.93
SFP1YLR403W RAD4P14736 754 aa9.24□□□□□ -0.93
SFP1YLR403W CLN2P20438 545 aa9.24□□□□□ -0.93
SFP1YLR403W CYM1P32898 989 aa9.24□□□□□ -0.93
SFP1YLR403W CBR1P38626 284 aaKnown RBP9.24□□□□□ -0.93
SFP1YLR403W SHQ1P40486 507 aaPredicted RBP9.24□□□□□ -0.93
SFP1YLR403W UPF3P48412 387 aaKnown RBP9.24□□□□□ -0.93
SFP1YLR403W KAP120Q02932 1032 aa9.24□□□□□ -0.93
SFP1YLR403W APM4Q99186 491 aa9.24□□□□□ -0.93
SFP1YLR403W PDR11P40550 1411 aa9.23□□□□□ -0.93
SFP1YLR403W DMC1P25453 334 aa9.23□□□□□ -0.93
SFP1YLR403W NAM9P27929 486 aa9.23□□□□□ -0.93
SFP1YLR403W YKT6P36015 200 aaKnown RBP9.23□□□□□ -0.93
SFP1YLR403W SSO2P39926 295 aa9.23□□□□□ -0.93
SFP1YLR403W PTC2P39966 464 aaKnown RBP9.23□□□□□ -0.93
SFP1YLR403W SAE2P46946 345 aa9.23□□□□□ -0.93
SFP1YLR403W SPO77Q06134 477 aa9.23□□□□□ -0.93
SFP1YLR403W TOS4Q06266 489 aa9.23□□□□□ -0.93
SFP1YLR403W MHR1Q06630 226 aa9.23□□□□□ -0.93
SFP1YLR403W TAH18Q12181 623 aa9.23□□□□□ -0.93
SFP1YLR403W MDS3P53094 1487 aa9.23□□□□□ -0.93
SFP1YLR403W BI4P03879 638 aa9.22□□□□□ -0.93
SFP1YLR403W YAK1P14680 807 aa9.22□□□□□ -0.93
SFP1YLR403W AEP2P22136 580 aa9.22□□□□□ -0.93
SFP1YLR403W PRP28P23394 588 aa9.22□□□□□ -0.93
SFP1YLR403W SPS22P25380 463 aa9.22□□□□□ -0.93
SFP1YLR403W NAM7P30771 971 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W MRT4P33201 236 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W CLG1P35190 452 aa9.22□□□□□ -0.93
SFP1YLR403W PXL1P36166 706 aa9.22□□□□□ -0.93
SFP1YLR403W MRPL7P36519 292 aa9.22□□□□□ -0.93
SFP1YLR403W GRS1P38088 690 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W VMA7P39111 118 aa9.22□□□□□ -0.93
SFP1YLR403W LSM8P47093 109 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W YPT11P48559 417 aa9.22□□□□□ -0.93
SFP1YLR403W IRC4Q03036 179 aa9.22□□□□□ -0.93
SFP1YLR403W YPL034WQ03083 165 aa9.22□□□□□ -0.93
SFP1YLR403W GTB1Q04924 702 aa9.22□□□□□ -0.93
SFP1YLR403W CST9Q06032 482 aa9.22□□□□□ -0.93
SFP1YLR403W NEW1Q08972 1196 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W RUP1Q12242 671 aa9.22□□□□□ -0.93
SFP1YLR403W SKM1Q12469 655 aa9.22□□□□□ -0.93
SFP1YLR403W FUR4P05316 633 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W PYC1P11154 1178 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W SRO9P25567 434 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W SEC1P30619 724 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W GCD7P32502 381 aaPredicted RBP9.22□□□□□ -0.93
SFP1YLR403W WHI3P34761 661 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W YAP1801P38856 637 aa9.22□□□□□ -0.93
SFP1YLR403W AIM2P39721 246 aa9.22□□□□□ -0.93
SFP1YLR403W RAI1P53063 387 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W LSB1P53281 241 aa9.22□□□□□ -0.93
SFP1YLR403W SSY1Q03770 852 aa9.22□□□□□ -0.93
SFP1YLR403W HRK1Q08732 759 aaKnown RBP9.22□□□□□ -0.93
SFP1YLR403W AIM41Q12032 185 aa9.22□□□□□ -0.93
SFP1YLR403W YBR298C-AQ8TGK4 73 aa9.22□□□□□ -0.93
SFP1YLR403W SCP160P06105 1222 aaKnown RBP RIP-Chip data9.21□□□□□ -0.93 RIP-Chip
SFP1YLR403W MATALPHA2P0CY08 210 aa9.21□□□□□ -0.93
SFP1YLR403W HMLALPHA2P0CY09 210 aa9.21□□□□□ -0.93
SFP1YLR403W GSY1P23337 708 aa9.21□□□□□ -0.93
SFP1YLR403W IMD2P38697 523 aaKnown RBP9.21□□□□□ -0.93
SFP1YLR403W YAP3P38749 330 aa9.21□□□□□ -0.93
SFP1YLR403W IRC6P43615 237 aa9.21□□□□□ -0.93
SFP1YLR403W DBP6P53734 629 aaKnown RBP9.21□□□□□ -0.93
SFP1YLR403W SPP1Q03012 353 aa9.21□□□□□ -0.93
SFP1YLR403W ERO1Q03103 563 aa9.21□□□□□ -0.93
SFP1YLR403W YDL114WQ07530 308 aa9.21□□□□□ -0.93
SFP1YLR403W TYW1Q08960 810 aaKnown RBP9.21□□□□□ -0.93
SFP1YLR403W YPR204WQ08995 1032 aa9.21□□□□□ -0.93
SFP1YLR403W OSW2Q12202 724 aa9.21□□□□□ -0.93
SFP1YLR403W ATP6P00854 259 aa9.2□□□□□ -0.94
SFP1YLR403W VMA16P23968 213 aa9.2□□□□□ -0.94
SFP1YLR403W YKL100CP34248 587 aa9.2□□□□□ -0.94
SFP1YLR403W ANR2P36090 516 aaPredicted RBP9.2□□□□□ -0.94
SFP1YLR403W YAP5P40574 245 aa9.2□□□□□ -0.94
SFP1YLR403W TDA10P42938 290 aa9.2□□□□□ -0.94
SFP1YLR403W AIM24P47127 394 aa9.2□□□□□ -0.94
SFP1YLR403W YJR141WP47172 347 aaPredicted RBP9.2□□□□□ -0.94
SFP1YLR403W PSP1P50896 841 aaKnown RBP9.2□□□□□ -0.94
SFP1YLR403W TAF6P53040 516 aa9.2□□□□□ -0.94
SFP1YLR403W MNT2P53059 558 aa9.2□□□□□ -0.94
SFP1YLR403W RMR1P53060 241 aa9.2□□□□□ -0.94
SFP1YLR403W YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
SFP1YLR403W NSI1Q12457 570 aa9.2□□□□□ -0.94
SFP1YLR403W YCL001W-BQ96VH2 84 aa9.2□□□□□ -0.94
SFP1YLR403W URA3P03962 267 aa9.2□□□□□ -0.94
SFP1YLR403W CPA2P03965 1118 aaKnown RBP9.2□□□□□ -0.94
SFP1YLR403W RPC40P07703 335 aaKnown RBP9.2□□□□□ -0.94
SFP1YLR403W CAD1P24813 409 aaKnown RBP9.2□□□□□ -0.94
SFP1YLR403W YCR051WP25631 222 aa9.2□□□□□ -0.94
SFP1YLR403W TFC1P32367 649 aa9.2□□□□□ -0.94
SFP1YLR403W GRX4P32642 244 aa9.2□□□□□ -0.94
SFP1YLR403W TFB1P32776 642 aa9.2□□□□□ -0.94
SFP1YLR403W CAF4P36130 643 aa9.2□□□□□ -0.94
SFP1YLR403W YKR078WP36158 585 aaKnown RBP9.2□□□□□ -0.94
SFP1YLR403W FMP33P46998 180 aa9.2□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms