RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C QRI7P43122 407 aa3.83□□□□□ -1.8
VPS33YLR396C TRI1Q05024 226 aa3.83□□□□□ -1.8
VPS33YLR396C IRC10Q08118 586 aa3.83□□□□□ -1.8
VPS33YLR396C RRP6Q12149 733 aaKnown RBP3.83□□□□□ -1.8
VPS33YLR396C PIF1P07271 859 aa3.82□□□□□ -1.8
VPS33YLR396C MSS18P08593 268 aa3.82□□□□□ -1.8
VPS33YLR396C TAF5P38129 798 aa3.82□□□□□ -1.8
VPS33YLR396C HIS6P40545 261 aa3.82□□□□□ -1.8
VPS33YLR396C RTS3P53289 263 aa3.82□□□□□ -1.8
VPS33YLR396C BRE1Q07457 700 aaKnown RBP3.82□□□□□ -1.8
VPS33YLR396C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
VPS33YLR396C ESC1Q03661 1658 aaKnown RBP3.82□□□□□ -1.8
VPS33YLR396C PCK1P10963 549 aa3.82□□□□□ -1.8
VPS33YLR396C STE4P18851 423 aa3.82□□□□□ -1.8
VPS33YLR396C CDC43P18898 376 aa3.82□□□□□ -1.8
VPS33YLR396C CAP1P28495 268 aaKnown RBP3.82□□□□□ -1.8
VPS33YLR396C YLF2P38746 405 aa3.82□□□□□ -1.8
VPS33YLR396C PMT6P42934 759 aa3.82□□□□□ -1.8
VPS33YLR396C GSM1P42950 618 aa3.82□□□□□ -1.8
VPS33YLR396C TAN1P53072 289 aaPredicted RBP3.82□□□□□ -1.8
VPS33YLR396C SPC98P53540 846 aa3.82□□□□□ -1.8
VPS33YLR396C DAK1P54838 584 aaKnown RBP3.82□□□□□ -1.8
VPS33YLR396C RPS15Q01855 142 aaKnown RBP3.82□□□□□ -1.8
VPS33YLR396C PCT1P13259 424 aa3.81□□□□□ -1.8
VPS33YLR396C DMC1P25453 334 aa3.81□□□□□ -1.8
VPS33YLR396C YMC2P38087 329 aa3.81□□□□□ -1.8
VPS33YLR396C YHL041WP38730 149 aa3.81□□□□□ -1.8
VPS33YLR396C RIM4P38741 713 aa3.81□□□□□ -1.8
VPS33YLR396C MIT1P40002 666 aa3.81□□□□□ -1.8
VPS33YLR396C VPS73P53142 486 aaKnown RBP3.81□□□□□ -1.8
VPS33YLR396C USA1Q03714 838 aa3.81□□□□□ -1.8
VPS33YLR396C YDR179W-AQ03983 463 aa3.81□□□□□ -1.8
VPS33YLR396C ATG2P53855 1592 aa3.81□□□□□ -1.8
VPS33YLR396C SEC12P11655 471 aa3.8□□□□□ -1.8
VPS33YLR396C PRP45P28004 379 aaPredicted RBP3.8□□□□□ -1.8
VPS33YLR396C DSS4P32601 143 aa3.8□□□□□ -1.8
VPS33YLR396C QRI1P43123 477 aaKnown RBP3.8□□□□□ -1.8
VPS33YLR396C YIP4P53093 235 aa3.8□□□□□ -1.8
VPS33YLR396C TEP1P53916 434 aa3.8□□□□□ -1.8
VPS33YLR396C UBX4P54730 416 aa3.8□□□□□ -1.8
VPS33YLR396C MOT3P54785 490 aaKnown RBP3.8□□□□□ -1.8
VPS33YLR396C MFM1Q02783 413 aa3.8□□□□□ -1.8
VPS33YLR396C RVB2Q12464 471 aaKnown RBP3.8□□□□□ -1.8
VPS33YLR396C EMP70P32802 667 aa3.8□□□□□ -1.8
VPS33YLR396C THI6P41835 540 aa3.8□□□□□ -1.8
VPS33YLR396C MAD3P47074 515 aa3.8□□□□□ -1.8
VPS33YLR396C BUD17P53727 317 aa3.8□□□□□ -1.8
VPS33YLR396C NGL2Q03264 515 aaKnown RBP3.8□□□□□ -1.8
VPS33YLR396C SUT2Q12286 268 aa3.8□□□□□ -1.8
VPS33YLR396C NOP58Q12499 511 aaKnown RBP3.8□□□□□ -1.8
VPS33YLR396C EDE1P34216 1381 aa3.79□□□□□ -1.8
VPS33YLR396C PHO5P00635 467 aa3.79□□□□□ -1.8
VPS33YLR396C CNE1P27825 502 aa3.79□□□□□ -1.8
VPS33YLR396C TDP1P38319 544 aa3.79□□□□□ -1.8
VPS33YLR396C COS12P53053 380 aa3.79□□□□□ -1.8
VPS33YLR396C TRS23Q03784 219 aa3.79□□□□□ -1.8
VPS33YLR396C GEA2P39993 1459 aaKnown RBP3.79□□□□□ -1.8
VPS33YLR396C GFA1P14742 717 aaKnown RBP3.79□□□□□ -1.8
VPS33YLR396C MSP1P28737 362 aa3.79□□□□□ -1.8
VPS33YLR396C STB5P38699 743 aa3.79□□□□□ -1.8
VPS33YLR396C STT3P39007 718 aaKnown RBP3.79□□□□□ -1.8
VPS33YLR396C POL31P46957 487 aa3.79□□□□□ -1.8
VPS33YLR396C ACS1Q01574 713 aa3.79□□□□□ -1.8
VPS33YLR396C EIS1Q05050 843 aaKnown RBP3.79□□□□□ -1.8
VPS33YLR396C HOF1Q05080 669 aa3.79□□□□□ -1.8
VPS33YLR396C ENT2Q05785 613 aa3.79□□□□□ -1.8
VPS33YLR396C AAD4Q07747 329 aa3.79□□□□□ -1.8
VPS33YLR396C CDC45Q08032 650 aa3.79□□□□□ -1.8
VPS33YLR396C RPO31P04051 1460 aa3.78□□□□□ -1.8
VPS33YLR396C PGI1P12709 554 aaKnown RBP3.78□□□□□ -1.8
VPS33YLR396C MUP3P38734 546 aa3.78□□□□□ -1.8
VPS33YLR396C RAD26P40352 1085 aa3.78□□□□□ -1.8
VPS33YLR396C STU2P46675 888 aa3.78□□□□□ -1.8
VPS33YLR396C PAP2P53632 584 aaKnown RBP3.78□□□□□ -1.8
VPS33YLR396C TRS31Q03337 283 aa3.78□□□□□ -1.8
VPS33YLR396C PDS5Q04264 1277 aa3.78□□□□□ -1.8
VPS33YLR396C CRD1Q07560 283 aa3.78□□□□□ -1.8
VPS33YLR396C YPL216WQ08964 1102 aa3.78□□□□□ -1.8
VPS33YLR396C MDM20Q12387 796 aaKnown RBP3.78□□□□□ -1.8
VPS33YLR396C TY1B-DR3Q99231 1755 aa3.78□□□□□ -1.8
VPS33YLR396C RNA1P11745 407 aaKnown RBP3.77□□□□□ -1.81
VPS33YLR396C VPS34P22543 875 aa3.77□□□□□ -1.81
VPS33YLR396C CCL1P37366 393 aa3.77□□□□□ -1.81
VPS33YLR396C APM3P38153 483 aa3.77□□□□□ -1.81
VPS33YLR396C VFA1P40080 203 aa3.77□□□□□ -1.81
VPS33YLR396C VPS27P40343 622 aaKnown RBP3.77□□□□□ -1.81
VPS33YLR396C YRB30P53107 440 aaPredicted RBP3.77□□□□□ -1.81
VPS33YLR396C PDR5P33302 1511 aaKnown RBP3.77□□□□□ -1.81
VPS33YLR396C YBT1P32386 1661 aa3.77□□□□□ -1.81
VPS33YLR396C FRD1P32614 470 aaKnown RBP3.77□□□□□ -1.81
VPS33YLR396C VPS24P36095 224 aaKnown RBP3.77□□□□□ -1.81
VPS33YLR396C YPT10P38146 199 aa3.77□□□□□ -1.81
VPS33YLR396C HIM1Q06674 414 aa3.77□□□□□ -1.81
VPS33YLR396C APA1P16550 321 aaKnown RBP3.76□□□□□ -1.81
VPS33YLR396C SIR1P21691 654 aa3.76□□□□□ -1.81
VPS33YLR396C SPC72P39723 622 aa3.76□□□□□ -1.81
VPS33YLR396C ACA1P39970 489 aa3.76□□□□□ -1.81
VPS33YLR396C YEL020CP39994 560 aa3.76□□□□□ -1.81
VPS33YLR396C RPT2P40327 437 aaKnown RBP3.76□□□□□ -1.81
VPS33YLR396C ASN1P49089 572 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms