RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C MTC3P53077 123 aa2.43□□□□□ -2.02
VPS13YLL040C YKR005CQ02203 525 aa2.43□□□□□ -2.02
VPS13YLL040C ACL4Q03771 387 aa2.43□□□□□ -2.02
VPS13YLL040C GIS4Q04233 774 aa2.43□□□□□ -2.02
VPS13YLL040C IES4Q08561 116 aa2.43□□□□□ -2.02
VPS13YLL040C YPL119C-AQ3E751 87 aa2.43□□□□□ -2.02
VPS13YLL040C CAR1P00812 333 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C YUR1P26725 428 aa2.43□□□□□ -2.02
VPS13YLL040C DPH5P32469 300 aaPredicted RBP2.43□□□□□ -2.02
VPS13YLL040C HIR2P32480 875 aa2.43□□□□□ -2.02
VPS13YLL040C GDA1P32621 518 aa2.43□□□□□ -2.02
VPS13YLL040C GLC3P32775 704 aa2.43□□□□□ -2.02
VPS13YLL040C DIA4P38705 446 aaPredicted RBP2.43□□□□□ -2.02
VPS13YLL040C ARH1P48360 493 aa2.43□□□□□ -2.02
VPS13YLL040C SLD5Q03406 294 aa2.43□□□□□ -2.02
VPS13YLL040C TFB4Q12004 338 aa2.43□□□□□ -2.02
VPS13YLL040C ITR2P30606 609 aa2.43□□□□□ -2.02
VPS13YLL040C PRM9P39551 298 aa2.43□□□□□ -2.02
VPS13YLL040C VAB2P40003 282 aa2.43□□□□□ -2.02
VPS13YLL040C RGD2P43556 714 aa2.43□□□□□ -2.02
VPS13YLL040C NET1P47035 1189 aa2.43□□□□□ -2.02
VPS13YLL040C ORC3P54790 616 aa2.43□□□□□ -2.02
VPS13YLL040C ADY3Q07732 790 aa2.43□□□□□ -2.02
VPS13YLL040C RSA1Q08932 381 aa2.43□□□□□ -2.02
VPS13YLL040C CSR2Q12734 1121 aa2.43□□□□□ -2.02
VPS13YLL040C KIN82P25341 720 aa2.43□□□□□ -2.02
VPS13YLL040C YCL049CP25577 312 aa2.43□□□□□ -2.02
VPS13YLL040C TOM20P35180 183 aa2.43□□□□□ -2.02
VPS13YLL040C DUG2P38149 878 aa2.43□□□□□ -2.02
VPS13YLL040C SER3P40054 469 aa2.43□□□□□ -2.02
VPS13YLL040C ZAP1P47043 880 aa2.43□□□□□ -2.02
VPS13YLL040C TAM41P53230 385 aa2.43□□□□□ -2.02
VPS13YLL040C TWF1P53250 332 aa2.43□□□□□ -2.02
VPS13YLL040C AIM39Q08223 395 aa2.43□□□□□ -2.02
VPS13YLL040C ESS1P22696 170 aa2.43□□□□□ -2.02
VPS13YLL040C UBP11P36026 717 aa2.43□□□□□ -2.02
VPS13YLL040C YBR062CP38239 180 aa2.43□□□□□ -2.02
VPS13YLL040C ISC1P40015 477 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C CCT8P47079 568 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C ATG1P53104 897 aa2.43□□□□□ -2.02
VPS13YLL040C NUT2Q06213 157 aa2.43□□□□□ -2.02
VPS13YLL040C SUI3P09064 285 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C MCM5P29496 775 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C SSH4P32343 579 aa2.43□□□□□ -2.02
VPS13YLL040C YKR023WP36119 530 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C NAB3P38996 802 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
VPS13YLL040C FHL1P39521 936 aa2.43□□□□□ -2.02
VPS13YLL040C MXR1P40029 184 aa2.43□□□□□ -2.02
VPS13YLL040C SER33P40510 469 aa2.43□□□□□ -2.02
VPS13YLL040C MCP2Q06567 569 aa2.43□□□□□ -2.02
VPS13YLL040C GPI13Q07830 1017 aa2.43□□□□□ -2.02
VPS13YLL040C CMR1Q12510 522 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C IZH4Q99393 312 aa2.43□□□□□ -2.02
VPS13YLL040C RAD10P06838 210 aa2.43□□□□□ -2.02
VPS13YLL040C CDC48P25694 835 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C RRN3P36070 627 aa2.43□□□□□ -2.02
VPS13YLL040C NCL1P38205 684 aaKnown RBP2.43□□□□□ -2.02
VPS13YLL040C FAA3P39002 694 aa2.43□□□□□ -2.02
VPS13YLL040C YIR042CP40586 236 aa2.43□□□□□ -2.02
VPS13YLL040C YAK1P14680 807 aa2.42□□□□□ -2.02
VPS13YLL040C UGA1P17649 471 aa2.42□□□□□ -2.02
VPS13YLL040C MEF1P25039 761 aa2.42□□□□□ -2.02
VPS13YLL040C PYC2P32327 1180 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C SKG6P32900 734 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C RPC25P35718 212 aa2.42□□□□□ -2.02
VPS13YLL040C LAM1P38851 1228 aa2.42□□□□□ -2.02
VPS13YLL040C PSP1P50896 841 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C ERP6P53198 216 aa2.42□□□□□ -2.02
VPS13YLL040C YNL144CP53907 740 aa2.42□□□□□ -2.02
VPS13YLL040C ULP1Q02724 621 aa2.42□□□□□ -2.02
VPS13YLL040C DIG1Q03063 452 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C YDR109CQ04585 715 aa2.42□□□□□ -2.02
VPS13YLL040C PRP4P20053 465 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C AAT2P23542 418 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C BUD31P25337 157 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C SCD5P34758 872 aa2.42□□□□□ -2.02
VPS13YLL040C SNU114P36048 1008 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C SKG1P36169 355 aa2.42□□□□□ -2.02
VPS13YLL040C EXO5P38289 585 aa2.42□□□□□ -2.02
VPS13YLL040C IMA5P40884 581 aa2.42□□□□□ -2.02
VPS13YLL040C GLG2P47011 380 aa2.42□□□□□ -2.02
VPS13YLL040C SQS1P53866 767 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C YOL159C-AQ3E769 90 aa2.42□□□□□ -2.02
VPS13YLL040C TPK3P05986 398 aa2.42□□□□□ -2.02
VPS13YLL040C GYP6P32806 458 aa2.42□□□□□ -2.02
VPS13YLL040C MRPL6P32904 214 aa2.42□□□□□ -2.02
VPS13YLL040C AIM18P38884 321 aa2.42□□□□□ -2.02
VPS13YLL040C MND1P53102 219 aa2.42□□□□□ -2.02
VPS13YLL040C SAS4Q04003 481 aa2.42□□□□□ -2.02
VPS13YLL040C CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
VPS13YLL040C PPH22P23595 377 aa2.42□□□□□ -2.02
VPS13YLL040C RPS1AP33442 255 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C ETR1P38071 380 aa2.42□□□□□ -2.02
VPS13YLL040C EXO84P38261 753 aa2.42□□□□□ -2.02
VPS13YLL040C MET18P40469 1032 aa2.42□□□□□ -2.02
VPS13YLL040C APS3P47064 194 aa2.42□□□□□ -2.02
VPS13YLL040C VPS9P54787 451 aa2.42□□□□□ -2.02
VPS13YLL040C YDL124WQ07551 312 aaKnown RBP2.42□□□□□ -2.02
VPS13YLL040C RIB3Q99258 208 aa2.42□□□□□ -2.02
VPS13YLL040C HMG1P12683 1054 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms