RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W GPP1P41277 250 aaKnown RBP5.74□□□□□ -1.49
CBF1YJR060W DAS1P47005 663 aa5.74□□□□□ -1.49
CBF1YJR060W MET13P53128 600 aa5.74□□□□□ -1.49
CBF1YJR060W DAM1P53267 343 aa5.74□□□□□ -1.49
CBF1YJR060W TOF1P53840 1238 aa5.74□□□□□ -1.49
CBF1YJR060W SND1Q04007 877 aa5.74□□□□□ -1.49
CBF1YJR060W IES4Q08561 116 aa5.74□□□□□ -1.49
CBF1YJR060W TRE2Q08693 809 aa5.74□□□□□ -1.49
CBF1YJR060W YPL277CQ08989 487 aa5.74□□□□□ -1.49
CBF1YJR060W OM45P16547 393 aa5.73□□□□□ -1.49
CBF1YJR060W SFL1P20134 766 aa5.73□□□□□ -1.49
CBF1YJR060W ADE2P21264 571 aaKnown RBP5.73□□□□□ -1.49
CBF1YJR060W NPP1P25353 742 aa5.73□□□□□ -1.49
CBF1YJR060W PCL2P25693 308 aa5.73□□□□□ -1.49
CBF1YJR060W AFR1P33304 620 aa5.73□□□□□ -1.49
CBF1YJR060W STO1P34160 861 aaKnown RBP5.73□□□□□ -1.49
CBF1YJR060W YBR238CP38330 731 aaKnown RBP5.73□□□□□ -1.49
CBF1YJR060W YAP1801P38856 637 aa5.73□□□□□ -1.49
CBF1YJR060W ULP2P40537 1034 aaPredicted RBP5.73□□□□□ -1.49
CBF1YJR060W GYP8P43570 497 aa5.73□□□□□ -1.49
CBF1YJR060W NIT3P49954 291 aa5.73□□□□□ -1.49
CBF1YJR060W HFM1P51979 1187 aa5.73□□□□□ -1.49
CBF1YJR060W ALT2P52892 507 aa5.73□□□□□ -1.49
CBF1YJR060W YGR283CP53336 341 aaPredicted RBP5.73□□□□□ -1.49
CBF1YJR060W YNL146WP53906 100 aa5.73□□□□□ -1.49
CBF1YJR060W YNL134CP53912 376 aaKnown RBP5.73□□□□□ -1.49
CBF1YJR060W ARK1P53974 638 aa5.73□□□□□ -1.49
CBF1YJR060W MTQ2Q03920 221 aaPredicted RBP5.73□□□□□ -1.49
CBF1YJR060W GFD1Q04839 188 aaKnown RBP5.73□□□□□ -1.49
CBF1YJR060W ECM7Q06200 448 aa5.73□□□□□ -1.49
CBF1YJR060W YDL057WQ07379 328 aa5.73□□□□□ -1.49
CBF1YJR060W TLG2Q08144 397 aa5.73□□□□□ -1.49
CBF1YJR060W TCO89Q08921 799 aa5.73□□□□□ -1.49
CBF1YJR060W MED1Q12321 566 aa5.73□□□□□ -1.49
CBF1YJR060W YLR422WQ06409 1932 aa5.73□□□□□ -1.49
CBF1YJR060W KAR1P11927 433 aa5.72□□□□□ -1.49
CBF1YJR060W RPN12P32496 274 aa5.72□□□□□ -1.49
CBF1YJR060W PRP19P32523 503 aaKnown RBP5.72□□□□□ -1.49
CBF1YJR060W TMT1P32643 299 aa5.72□□□□□ -1.49
CBF1YJR060W MTC2P34246 357 aa5.72□□□□□ -1.49
CBF1YJR060W TSA1P34760 196 aaKnown RBP5.72□□□□□ -1.49
CBF1YJR060W DRE2P36152 348 aa5.72□□□□□ -1.49
CBF1YJR060W NPR3P38742 1146 aa5.72□□□□□ -1.49
CBF1YJR060W BCD1P38772 366 aa5.72□□□□□ -1.49
CBF1YJR060W TVP23P38962 199 aa5.72□□□□□ -1.49
CBF1YJR060W SCD6P45978 349 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
CBF1YJR060W GCV2P49095 1034 aa5.72□□□□□ -1.49
CBF1YJR060W NBP1P52919 319 aaPredicted RBP5.72□□□□□ -1.49
CBF1YJR060W MNP1P53163 194 aaPredicted RBP5.72□□□□□ -1.49
CBF1YJR060W TAM41P53230 385 aa5.72□□□□□ -1.49
CBF1YJR060W COG6P53959 839 aa5.72□□□□□ -1.49
CBF1YJR060W VTC3Q02725 835 aa5.72□□□□□ -1.49
CBF1YJR060W YDR514CQ04408 483 aa5.72□□□□□ -1.49
CBF1YJR060W DON1Q05610 365 aa5.72□□□□□ -1.49
CBF1YJR060W HCR1Q05775 265 aaKnown RBP5.72□□□□□ -1.49
CBF1YJR060W RSC3Q06639 885 aa5.72□□□□□ -1.49
CBF1YJR060W CDA2Q06703 312 aa5.72□□□□□ -1.49
CBF1YJR060W MDM38Q08179 573 aa5.72□□□□□ -1.49
CBF1YJR060W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
CBF1YJR060W YOR378WQ08902 515 aa5.72□□□□□ -1.49
CBF1YJR060W RIB2Q12362 591 aaKnown RBP5.72□□□□□ -1.49
CBF1YJR060W GAL10P04397 699 aa5.71□□□□□ -1.5
CBF1YJR060W ROX1P25042 368 aa5.71□□□□□ -1.5
CBF1YJR060W EMC3P36039 253 aa5.71□□□□□ -1.5
CBF1YJR060W MNN4P36044 1178 aa5.71□□□□□ -1.5
CBF1YJR060W MRX3P38172 270 aa5.71□□□□□ -1.5
CBF1YJR060W MMS4P38257 691 aa5.71□□□□□ -1.5
CBF1YJR060W VID24P38263 362 aa5.71□□□□□ -1.5
CBF1YJR060W ERC1P38767 581 aa5.71□□□□□ -1.5
CBF1YJR060W NPP2P39997 493 aa5.71□□□□□ -1.5
CBF1YJR060W ESL1P40456 1118 aa5.71□□□□□ -1.5
CBF1YJR060W IRC24P40580 263 aa5.71□□□□□ -1.5
CBF1YJR060W LAM5P43560 674 aa5.71□□□□□ -1.5
CBF1YJR060W CAF16P43569 289 aa5.71□□□□□ -1.5
CBF1YJR060W RSC8P43609 557 aaKnown RBP5.71□□□□□ -1.5
CBF1YJR060W TOS3P43637 560 aa5.71□□□□□ -1.5
CBF1YJR060W COS5P47187 383 aa5.71□□□□□ -1.5
CBF1YJR060W MCM6P53091 1017 aaKnown RBP5.71□□□□□ -1.5
CBF1YJR060W ATP25Q03153 612 aa5.71□□□□□ -1.5
CBF1YJR060W ROT1Q03691 256 aa5.71□□□□□ -1.5
CBF1YJR060W PCD1Q12524 340 aa5.71□□□□□ -1.5
CBF1YJR060W GLN3P18494 730 aa5.7□□□□□ -1.5
CBF1YJR060W TRM2P33753 639 aa5.7□□□□□ -1.5
CBF1YJR060W YKL023WP36103 277 aaKnown RBP5.7□□□□□ -1.5
CBF1YJR060W AIM3P38266 947 aaKnown RBP5.7□□□□□ -1.5
CBF1YJR060W LAM1P38851 1228 aa5.7□□□□□ -1.5
CBF1YJR060W JHD1P40034 492 aa5.7□□□□□ -1.5
CBF1YJR060W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
CBF1YJR060W ASN1P49089 572 aaKnown RBP5.7□□□□□ -1.5
CBF1YJR060W MUK1Q02866 612 aa5.7□□□□□ -1.5
CBF1YJR060W TRS130Q03660 1102 aa5.7□□□□□ -1.5
CBF1YJR060W VMS1Q04311 632 aaKnown RBP5.7□□□□□ -1.5
CBF1YJR060W COG4Q06096 861 aa5.7□□□□□ -1.5
CBF1YJR060W RLP24Q07915 199 aaKnown RBP5.7□□□□□ -1.5
CBF1YJR060W SDH5Q08230 162 aa5.7□□□□□ -1.5
CBF1YJR060W ENV7Q12003 364 aa5.7□□□□□ -1.5
CBF1YJR060W AHC1Q12433 566 aa5.7□□□□□ -1.5
CBF1YJR060W YPR117WQ06116 2489 aa5.7□□□□□ -1.5
CBF1YJR060W ATP4P05626 244 aa5.69□□□□□ -1.5
CBF1YJR060W GSY2P27472 705 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 273.6 ms