RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN7	YHR206W	SED4	P25365	1065 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	MSH1	P25846	959 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	PMI40	P29952	429 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	PUP2	P32379	260 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	NIP1	P32497	812 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	COY1	P34237	679 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	TEF4	P36008	412 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	UIP5	P36137	443 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YBL028C	P38202	106 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	RTS1	P38903	757 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YIL108W	P40483	696 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	EPL1	P43572	832 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YGR153W	P48238	217 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	ARC35	P53731	342 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	YNR061C	P53747	219 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YNR068C	P53754	272 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YML119W	Q03208	357 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	YDR131C	Q03899	556 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	SFI1	Q12369	946 aa		3.59	□□□□□ -1.83
SKN7	YHR206W	RVB2	Q12464	471 aa	Known RBP	3.59	□□□□□ -1.83
SKN7	YHR206W	PUT4	P15380	627 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	CKA1	P15790	372 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	RFA1	P22336	621 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SKN7	YHR206W	YBR225W	P38321	900 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	GND1	P38720	489 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	UBP7	P40453	1071 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	GYP8	P43570	497 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	MSE1	P48525	536 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	VPS4	P52917	437 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	TEP1	P53916	434 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	YKR011C	Q02209	353 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	YPL107W	Q02873	248 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	HLR1	Q04429	423 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	YPR027C	Q12079	277 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	ARP7	Q12406	477 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	PDH1	Q12428	516 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SKN7	YHR206W	RPP2A	P05319	106 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	MET17	P06106	444 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	RRP7	P25368	297 aa	Predicted RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	TYE7	P33122	291 aa	Predicted RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	RPT3	P33298	428 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	XRS2	P33301	854 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	SER1	P33330	395 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	KDX1	P36005	433 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	LAS1	P36146	502 aa	Predicted RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	HSL7	P38274	827 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	PCM1	P38628	557 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	DED81	P38707	554 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	SMC2	P38989	1170 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	ALD5	P40047	520 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	MKT1	P40850	830 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	ALG2	P43636	503 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	NOP9	P47077	666 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	VID30	P53076	958 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	LSB1	P53281	241 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	YGR266W	P53326	701 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	ARE2	P53629	642 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	DAK1	P54838	584 aa	Known RBP	3.58	□□□□□ -1.84
SKN7	YHR206W	FCP1	Q03254	732 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	SKY1	Q03656	742 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	VID22	Q05934	901 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SKN7	YHR206W	VHS3	Q08438	674 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	MDY2	Q12285	212 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	RTN2	Q12443	393 aa		3.58	□□□□□ -1.84
SKN7	YHR206W	CPA2	P03965	1118 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	SNF1	P06782	633 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	GRR1	P24814	1151 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	PHO84	P25297	587 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	SGF29	P25554	259 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	SPB1	P25582	841 aa	Predicted RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	RME1	P32338	300 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	SPC110	P32380	944 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	DID4	P36108	232 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	PPE1	P38796	400 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	CHS7	P38843	316 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	CTF8	P38877	133 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	DUN1	P39009	513 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	STL1	P39932	569 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	SDP1	P40479	209 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	PXA1	P41909	870 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	STU2	P46675	888 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	LSC1	P53598	329 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	AIM32	Q04689	311 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	ADE13	Q05911	482 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	NOP6	Q07623	225 aa	Known RBP	3.57	□□□□□ -1.84
SKN7	YHR206W	HAL9	Q12180	1030 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	TRM13	Q12383	476 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	APC2	Q12440	853 aa		3.57	□□□□□ -1.84
SKN7	YHR206W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	RIP-Chip
SKN7	YHR206W	TUB3	P09734	445 aa	Known RBP	3.56	□□□□□ -1.84
SKN7	YHR206W	PRP4	P20053	465 aa	Known RBP	3.56	□□□□□ -1.84
SKN7	YHR206W	HCA4	P20448	770 aa	Known RBP	3.56	□□□□□ -1.84
SKN7	YHR206W	CAD1	P24813	409 aa	Known RBP	3.56	□□□□□ -1.84
SKN7	YHR206W	STE50	P25344	346 aa		3.56	□□□□□ -1.84
SKN7	YHR206W	YCL002C	P25565	263 aa		3.56	□□□□□ -1.84
SKN7	YHR206W	HRR25	P29295	494 aa	Known RBP	3.56	□□□□□ -1.84
SKN7	YHR206W	RMA1	P36001	430 aa	Known RBP	3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms