RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W PUT4P15380 627 aa5.05□□□□□ -1.6
VPS29YHR012W MIH1P23748 554 aa5.05□□□□□ -1.6
VPS29YHR012W YJU3P28321 313 aa5.05□□□□□ -1.6
VPS29YHR012W PYC2P32327 1180 aaKnown RBP5.05□□□□□ -1.6
VPS29YHR012W CDC11P32458 415 aa5.05□□□□□ -1.6
VPS29YHR012W SRB2P34162 210 aa5.05□□□□□ -1.6
VPS29YHR012W YHR078WP38799 552 aa5.05□□□□□ -1.6
VPS29YHR012W SPT8P38915 602 aa5.05□□□□□ -1.6
VPS29YHR012W LYS9P38999 446 aa5.05□□□□□ -1.6
VPS29YHR012W HXT8P40886 569 aa5.05□□□□□ -1.6
VPS29YHR012W SNZ3P43545 298 aa5.05□□□□□ -1.6
VPS29YHR012W YTP1P53584 459 aa5.05□□□□□ -1.6
VPS29YHR012W SNZ2P53824 298 aa5.05□□□□□ -1.6
VPS29YHR012W YNL108CP53929 270 aa5.05□□□□□ -1.6
VPS29YHR012W DOS2P54858 310 aa5.05□□□□□ -1.6
VPS29YHR012W SND1Q04007 877 aa5.05□□□□□ -1.6
VPS29YHR012W OPI10Q08202 246 aa5.05□□□□□ -1.6
VPS29YHR012W AIM39Q08223 395 aa5.05□□□□□ -1.6
VPS29YHR012W NDD1Q08887 554 aa5.05□□□□□ -1.6
VPS29YHR012W MIS1P09440 975 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W YPK1P12688 680 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W PMI40P29952 429 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W SPC110P32380 944 aa5.04□□□□□ -1.6
VPS29YHR012W LIP5P32875 414 aa5.04□□□□□ -1.6
VPS29YHR012W RPC25P35718 212 aa5.04□□□□□ -1.6
VPS29YHR012W YET1P35723 206 aa5.04□□□□□ -1.6
VPS29YHR012W ADD66P36040 267 aa5.04□□□□□ -1.6
VPS29YHR012W FUI1P38196 639 aa5.04□□□□□ -1.6
VPS29YHR012W CBR1P38626 284 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W TDA3P38758 523 aa5.04□□□□□ -1.6
VPS29YHR012W MIP6P38760 659 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W LAM1P38851 1228 aa5.04□□□□□ -1.6
VPS29YHR012W SMC2P38989 1170 aaKnown RBP5.04□□□□□ -1.6
VPS29YHR012W YEL075CP39972 122 aa5.04□□□□□ -1.6
VPS29YHR012W VEL1P53058 206 aa5.04□□□□□ -1.6
VPS29YHR012W GRX8Q05926 109 aa5.04□□□□□ -1.6
VPS29YHR012W YCS4Q06156 1176 aa5.04□□□□□ -1.6
VPS29YHR012W RTK1Q12100 620 aaPredicted RBP5.04□□□□□ -1.6
VPS29YHR012W EMP46Q12396 444 aa5.04□□□□□ -1.6
VPS29YHR012W HIS1P00498 297 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W PAB1P04147 577 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6 RIP-Chip
VPS29YHR012W POL30P15873 258 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W DAL81P21657 970 aa5.03□□□□□ -1.6
VPS29YHR012W SEC1P30619 724 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W ABD1P32783 436 aaPredicted RBP5.03□□□□□ -1.6
VPS29YHR012W GYP6P32806 458 aa5.03□□□□□ -1.6
VPS29YHR012W MDJ1P35191 511 aa5.03□□□□□ -1.6
VPS29YHR012W MUM2P38236 366 aa5.03□□□□□ -1.6
VPS29YHR012W HSL7P38274 827 aa5.03□□□□□ -1.6
VPS29YHR012W URA8P38627 578 aaPredicted RBP5.03□□□□□ -1.6
VPS29YHR012W SRP68P38687 599 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W DSN1P40568 576 aa5.03□□□□□ -1.6
VPS29YHR012W ASG7P46993 209 aa5.03□□□□□ -1.6
VPS29YHR012W COQ5P49017 307 aa5.03□□□□□ -1.6
VPS29YHR012W PUS2P53167 370 aa5.03□□□□□ -1.6
VPS29YHR012W TRM112P53738 135 aaPredicted RBP5.03□□□□□ -1.6
VPS29YHR012W EAF7P53911 425 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W KTR6P54070 446 aa5.03□□□□□ -1.6
VPS29YHR012W HEL2Q05580 639 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W RSB1Q08417 382 aa5.03□□□□□ -1.6
VPS29YHR012W POL2P21951 2222 aaKnown RBP5.03□□□□□ -1.6
VPS29YHR012W ENO1P00924 437 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W ADE3P07245 946 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W MTF2P10849 440 aa5.02□□□□□ -1.61
VPS29YHR012W SPT15P13393 240 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W SEC23P15303 768 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W ERG6P25087 383 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W MSH3P25336 1018 aa5.02□□□□□ -1.61
VPS29YHR012W YKL151CP36059 337 aa5.02□□□□□ -1.61
VPS29YHR012W TRZ1P36159 838 aaPredicted RBP5.02□□□□□ -1.61
VPS29YHR012W EXO5P38289 585 aa5.02□□□□□ -1.61
VPS29YHR012W FSH1P38777 243 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W STL1P39932 569 aa5.02□□□□□ -1.61
VPS29YHR012W EDC3P39998 551 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W TAN1P53072 289 aaPredicted RBP5.02□□□□□ -1.61
VPS29YHR012W YGR283CP53336 341 aaPredicted RBP5.02□□□□□ -1.61
VPS29YHR012W HST2P53686 357 aa5.02□□□□□ -1.61
VPS29YHR012W YNL247WP53852 767 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W YNL144CP53907 740 aa5.02□□□□□ -1.61
VPS29YHR012W ADI1Q03677 179 aa5.02□□□□□ -1.61
VPS29YHR012W PEX15Q08215 383 aa5.02□□□□□ -1.61
VPS29YHR012W THI21Q08975 551 aa5.02□□□□□ -1.61
VPS29YHR012W SAM4Q08985 325 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W SFI1Q12369 946 aa5.02□□□□□ -1.61
VPS29YHR012W MMP1Q12372 583 aa5.02□□□□□ -1.61
VPS29YHR012W BRR2P32639 2163 aaKnown RBP5.02□□□□□ -1.61
VPS29YHR012W BI2P03873 423 aa5.01□□□□□ -1.61
VPS29YHR012W SST2P11972 698 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W GFA1P14742 717 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W TRM1P15565 570 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W RML2P32611 393 aa5.01□□□□□ -1.61
VPS29YHR012W UTH1P36135 365 aa5.01□□□□□ -1.61
VPS29YHR012W YHL041WP38730 149 aa5.01□□□□□ -1.61
VPS29YHR012W TIF34P40217 347 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W FET5P43561 622 aa5.01□□□□□ -1.61
VPS29YHR012W MNN11P46985 422 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W YJL132WP47014 750 aa5.01□□□□□ -1.61
VPS29YHR012W AIM14P53109 570 aa5.01□□□□□ -1.61
VPS29YHR012W YNR063WP53749 607 aa5.01□□□□□ -1.61
VPS29YHR012W AQR1P53943 586 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms