RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C RKM2Q03942 479 aa7.52□□□□□ -1.21
PUP2YGR253C SND1Q04007 877 aa7.52□□□□□ -1.21
PUP2YGR253C RPC11Q04307 110 aaPredicted RBP7.52□□□□□ -1.21
PUP2YGR253C RPN8Q08723 338 aaKnown RBP7.52□□□□□ -1.21
PUP2YGR253C AIM44Q99299 758 aa7.52□□□□□ -1.21
PUP2YGR253C Q0182Q9ZZW1 134 aa7.52□□□□□ -1.21
PUP2YGR253C SST2P11972 698 aaKnown RBP7.51□□□□□ -1.21
PUP2YGR253C TUP1P16649 713 aa7.51□□□□□ -1.21
PUP2YGR253C EST1P17214 699 aaPredicted RBP7.51□□□□□ -1.21
PUP2YGR253C SFP1P32432 683 aa7.51□□□□□ -1.21
PUP2YGR253C ADD66P36040 267 aa7.51□□□□□ -1.21
PUP2YGR253C KAP104P38217 918 aaKnown RBP7.51□□□□□ -1.21
PUP2YGR253C SRP68P38687 599 aaKnown RBP7.51□□□□□ -1.21
PUP2YGR253C YJL070CP40361 888 aa7.51□□□□□ -1.21
PUP2YGR253C SWS2P53937 143 aa7.51□□□□□ -1.21
PUP2YGR253C YPL113CQ02961 396 aa7.51□□□□□ -1.21
PUP2YGR253C TRM82Q03774 444 aa7.51□□□□□ -1.21
PUP2YGR253C YDR222WQ04925 415 aa7.51□□□□□ -1.21
PUP2YGR253C PEX11Q12462 236 aa7.51□□□□□ -1.21
PUP2YGR253C IRA1P18963 3092 aa7.5□□□□□ -1.21
PUP2YGR253C BRR2P32639 2163 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C RPS6AP0CX37 236 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C RPS6BP0CX38 236 aaPredicted RBP7.5□□□□□ -1.21
PUP2YGR253C RPL1AP0CX43 217 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C RPL1BP0CX44 217 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C SPT15P13393 240 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C PUF4P25339 888 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
PUP2YGR253C SHM1P37292 490 aaPredicted RBP7.5□□□□□ -1.21
PUP2YGR253C UME6P39001 836 aa7.5□□□□□ -1.21
PUP2YGR253C YER158CP40095 573 aa7.5□□□□□ -1.21
PUP2YGR253C YIL054WP40524 105 aa7.5□□□□□ -1.21
PUP2YGR253C MMM1P41800 426 aa7.5□□□□□ -1.21
PUP2YGR253C TAD1P53065 400 aa7.5□□□□□ -1.21
PUP2YGR253C BET4Q00618 327 aa7.5□□□□□ -1.21
PUP2YGR253C SXM1Q04175 944 aaKnown RBP7.5□□□□□ -1.21
PUP2YGR253C YLR456WQ06199 204 aa7.5□□□□□ -1.21
PUP2YGR253C YDL073WQ07454 984 aa7.5□□□□□ -1.21
PUP2YGR253C THI21Q08975 551 aa7.5□□□□□ -1.21
PUP2YGR253C TEC1P18412 486 aa7.49□□□□□ -1.21
PUP2YGR253C MRPL8P22353 238 aa7.49□□□□□ -1.21
PUP2YGR253C MIH1P23748 554 aa7.49□□□□□ -1.21
PUP2YGR253C MSH3P25336 1018 aa7.49□□□□□ -1.21
PUP2YGR253C KAR9P32526 644 aa7.49□□□□□ -1.21
PUP2YGR253C LIP5P32875 414 aa7.49□□□□□ -1.21
PUP2YGR253C WBP1P33767 430 aaKnown RBP7.49□□□□□ -1.21
PUP2YGR253C YKL151CP36059 337 aa7.49□□□□□ -1.21
PUP2YGR253C VPS24P36095 224 aaKnown RBP7.49□□□□□ -1.21
PUP2YGR253C APM3P38153 483 aa7.49□□□□□ -1.21
PUP2YGR253C RVS167P39743 482 aaKnown RBP7.49□□□□□ -1.21
PUP2YGR253C YTP1P53584 459 aa7.49□□□□□ -1.21
PUP2YGR253C ORC3P54790 616 aa7.49□□□□□ -1.21
PUP2YGR253C HAP5Q02516 242 aa7.49□□□□□ -1.21
PUP2YGR253C INP2Q03824 705 aa7.49□□□□□ -1.21
PUP2YGR253C CIR2Q08822 631 aa7.49□□□□□ -1.21
PUP2YGR253C APL5Q08951 932 aaKnown RBP7.49□□□□□ -1.21
PUP2YGR253C GNT1Q12096 491 aa7.49□□□□□ -1.21
PUP2YGR253C RKM5Q12367 367 aa7.49□□□□□ -1.21
PUP2YGR253C MIS1P09440 975 aaKnown RBP7.48□□□□□ -1.21
PUP2YGR253C YPK1P12688 680 aaKnown RBP7.48□□□□□ -1.21
PUP2YGR253C SEC65P29478 273 aa7.48□□□□□ -1.21
PUP2YGR253C SPC110P32380 944 aa7.48□□□□□ -1.21
PUP2YGR253C PMT1P33775 817 aa7.48□□□□□ -1.21
PUP2YGR253C TGL4P36165 910 aa7.48□□□□□ -1.21
PUP2YGR253C JNM1P36224 373 aa7.48□□□□□ -1.21
PUP2YGR253C TAE1P38340 232 aa7.48□□□□□ -1.21
PUP2YGR253C RRP3P38712 501 aaKnown RBP7.48□□□□□ -1.21
PUP2YGR253C ASG1P40467 964 aa7.48□□□□□ -1.21
PUP2YGR253C HXT8P40886 569 aa7.48□□□□□ -1.21
PUP2YGR253C ASN2P49090 572 aaKnown RBP7.48□□□□□ -1.21
PUP2YGR253C MNT2P53059 558 aa7.48□□□□□ -1.21
PUP2YGR253C YGR111WP53265 400 aa7.48□□□□□ -1.21
PUP2YGR253C NRM1P53718 249 aa7.48□□□□□ -1.21
PUP2YGR253C ATG10Q07879 167 aa7.48□□□□□ -1.21
PUP2YGR253C ALR1Q08269 859 aa7.48□□□□□ -1.21
PUP2YGR253C IOC2Q12072 812 aa7.48□□□□□ -1.21
PUP2YGR253C SFI1Q12369 946 aa7.48□□□□□ -1.21
PUP2YGR253C YEL077CQ3E7X8 1277 aa7.48□□□□□ -1.21
PUP2YGR253C SUC2P00724 532 aa7.47□□□□□ -1.21
PUP2YGR253C SWC5P38326 303 aa7.47□□□□□ -1.21
PUP2YGR253C TMN3P40071 706 aa7.47□□□□□ -1.21
PUP2YGR253C RAD26P40352 1085 aa7.47□□□□□ -1.21
PUP2YGR253C FET5P43561 622 aa7.47□□□□□ -1.21
PUP2YGR253C CIS3P47001 227 aa7.47□□□□□ -1.21
PUP2YGR253C GLG2P47011 380 aa7.47□□□□□ -1.21
PUP2YGR253C YMR1P47147 688 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
PUP2YGR253C YJR124CP47159 448 aa7.47□□□□□ -1.21
PUP2YGR253C YMR178WQ03219 274 aaKnown RBP7.47□□□□□ -1.21
PUP2YGR253C YML096WQ04489 525 aa7.47□□□□□ -1.21
PUP2YGR253C GRX8Q05926 109 aa7.47□□□□□ -1.21
PUP2YGR253C RTT10Q08924 1013 aa7.47□□□□□ -1.21
PUP2YGR253C BMT6Q12291 365 aa7.47□□□□□ -1.21
PUP2YGR253C LEU1P07264 779 aaKnown RBP7.46□□□□□ -1.22
PUP2YGR253C POL30P15873 258 aaKnown RBP7.46□□□□□ -1.22
PUP2YGR253C TRX1P22217 103 aaKnown RBP7.46□□□□□ -1.22
PUP2YGR253C MNE1P24720 663 aa7.46□□□□□ -1.22
PUP2YGR253C CIN8P27895 1000 aa7.46□□□□□ -1.22
PUP2YGR253C YKL050CP35736 922 aa7.46□□□□□ -1.22
PUP2YGR253C FUI1P38196 639 aa7.46□□□□□ -1.22
PUP2YGR253C YEL028WP39989 153 aa7.46□□□□□ -1.22
PUP2YGR253C PAN6P40459 309 aa7.46□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 168.3 ms