RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W PDH1Q12428 516 aaKnown RBP1.48□□□□□ -2.17
MSN5YDR335W RPS9BP05755 195 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W CTT1P06115 562 aa1.47□□□□□ -2.17
MSN5YDR335W YEL076C-AP0CX16 216 aa1.47□□□□□ -2.17
MSN5YDR335W YLR464WP0CX17 216 aa1.47□□□□□ -2.17
MSN5YDR335W CMP2P14747 604 aa1.47□□□□□ -2.17
MSN5YDR335W CKA1P15790 372 aa1.47□□□□□ -2.17
MSN5YDR335W RPS7AP26786 190 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W SSE1P32589 693 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W VPS17P32913 551 aa1.47□□□□□ -2.17
MSN5YDR335W GCS1P35197 352 aa1.47□□□□□ -2.17
MSN5YDR335W EMC3P36039 253 aa1.47□□□□□ -2.17
MSN5YDR335W SHM2P37291 469 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W LAM1P38851 1228 aa1.47□□□□□ -2.17
MSN5YDR335W SET5P38890 526 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W YEL076CP39971 216 aa1.47□□□□□ -2.17
MSN5YDR335W TSC11P40061 1430 aa1.47□□□□□ -2.17
MSN5YDR335W YJR061WP40355 935 aa1.47□□□□□ -2.17
MSN5YDR335W AXL1P40851 1208 aa1.47□□□□□ -2.17
MSN5YDR335W SEC27P41811 889 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W GUS1P46655 708 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
MSN5YDR335W YJL045WP47052 634 aa1.47□□□□□ -2.17
MSN5YDR335W CTH1P47976 325 aa1.47□□□□□ -2.17
MSN5YDR335W CCM1P48237 864 aaPredicted RBP1.47□□□□□ -2.17
MSN5YDR335W ORC4P54791 529 aa1.47□□□□□ -2.17
MSN5YDR335W TAP42Q04372 366 aa1.47□□□□□ -2.17
MSN5YDR335W SSL1Q04673 461 aaPredicted RBP1.47□□□□□ -2.17
MSN5YDR335W HRQ1Q05549 1077 aa1.47□□□□□ -2.17
MSN5YDR335W YLR257WQ06146 321 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W PHO92Q06390 306 aa1.47□□□□□ -2.17
MSN5YDR335W TRM8Q12009 286 aa1.47□□□□□ -2.17
MSN5YDR335W GNT1Q12096 491 aa1.47□□□□□ -2.17
MSN5YDR335W SEC39Q12745 709 aa1.47□□□□□ -2.17
MSN5YDR335W STE2D6VTK4 431 aa1.47□□□□□ -2.17
MSN5YDR335W GCN4P03069 281 aa1.47□□□□□ -2.17
MSN5YDR335W ADE3P07245 946 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W PDX1P16451 410 aa1.47□□□□□ -2.17
MSN5YDR335W NCP1P16603 691 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W CYS3P31373 394 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W RPN2P32565 945 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W PSD1P39006 500 aa1.47□□□□□ -2.17
MSN5YDR335W SPC72P39723 622 aa1.47□□□□□ -2.17
MSN5YDR335W STL1P39932 569 aa1.47□□□□□ -2.17
MSN5YDR335W PUG1P40100 303 aa1.47□□□□□ -2.17
MSN5YDR335W RIC1P40395 1056 aa1.47□□□□□ -2.17
MSN5YDR335W YIL108WP40483 696 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W BPL1P48445 690 aaPredicted RBP1.47□□□□□ -2.17
MSN5YDR335W ARI1P53111 347 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W YAP1802P53309 568 aa1.47□□□□□ -2.17
MSN5YDR335W ATG21Q02887 496 aa1.47□□□□□ -2.17
MSN5YDR335W RAD30Q04049 632 aa1.47□□□□□ -2.17
MSN5YDR335W STP3Q05937 343 aa1.47□□□□□ -2.17
MSN5YDR335W CSR1Q06705 408 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W ENT4Q07872 247 aa1.47□□□□□ -2.17
MSN5YDR335W APL4Q12028 832 aa1.47□□□□□ -2.17
MSN5YDR335W GET3Q12154 354 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W RTN2Q12443 393 aa1.47□□□□□ -2.17
MSN5YDR335W AI3P03877 415 aa1.47□□□□□ -2.17
MSN5YDR335W VAS1P07806 1104 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W RPL3P14126 387 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W MSB1P21339 1137 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W SEC15P22224 910 aa1.47□□□□□ -2.17
MSN5YDR335W RAD51P25454 400 aa1.47□□□□□ -2.17
MSN5YDR335W ERV1P27882 189 aa1.47□□□□□ -2.17
MSN5YDR335W MGM1P32266 881 aa1.47□□□□□ -2.17
MSN5YDR335W EBP2P36049 427 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W MAL33P38157 468 aa1.47□□□□□ -2.17
MSN5YDR335W YBR225WP38321 900 aa1.47□□□□□ -2.17
MSN5YDR335W WSS1P38838 269 aa1.47□□□□□ -2.17
MSN5YDR335W SIT1P39980 628 aa1.47□□□□□ -2.17
MSN5YDR335W YNL058CP53947 316 aa1.47□□□□□ -2.17
MSN5YDR335W ZDS2P54786 942 aa1.47□□□□□ -2.17
MSN5YDR335W VTC3Q02725 835 aa1.47□□□□□ -2.17
MSN5YDR335W SSY1Q03770 852 aa1.47□□□□□ -2.17
MSN5YDR335W YDR239CQ03780 787 aa1.47□□□□□ -2.17
MSN5YDR335W FMP45Q07651 309 aa1.47□□□□□ -2.17
MSN5YDR335W SDH5Q08230 162 aa1.47□□□□□ -2.17
MSN5YDR335W YOR059CQ08448 450 aaKnown RBP1.47□□□□□ -2.17
MSN5YDR335W RIM20Q12033 661 aa1.47□□□□□ -2.17
MSN5YDR335W HOS1Q12214 470 aa1.47□□□□□ -2.17
MSN5YDR335W ZRT2Q12436 422 aa1.47□□□□□ -2.17
MSN5YDR335W POM152P39685 1337 aa1.47□□□□□ -2.17
MSN5YDR335W RRP5Q05022 1729 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W RPL11AP0C0W9 174 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W GAS1P22146 559 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W PRP28P23394 588 aa1.46□□□□□ -2.18
MSN5YDR335W SRO9P25567 434 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W PAP1P29468 568 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W RPD3P32561 433 aa1.46□□□□□ -2.18
MSN5YDR335W OAF3P36023 863 aa1.46□□□□□ -2.18
MSN5YDR335W YKL151CP36059 337 aa1.46□□□□□ -2.18
MSN5YDR335W RGD1P38339 666 aa1.46□□□□□ -2.18
MSN5YDR335W HSM3P38348 480 aa1.46□□□□□ -2.18
MSN5YDR335W LRP1P38801 184 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W MTG2P38860 518 aa1.46□□□□□ -2.18
MSN5YDR335W NPR2P39923 615 aa1.46□□□□□ -2.18
MSN5YDR335W YER010CP40011 234 aa1.46□□□□□ -2.18
MSN5YDR335W HFM1P51979 1187 aa1.46□□□□□ -2.18
MSN5YDR335W MNT2P53059 558 aa1.46□□□□□ -2.18
MSN5YDR335W GTF1P53260 183 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms