RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C ATM1P40416 690 aa4.32□□□□□ -1.72
BRE4YDL231C ESL1P40456 1118 aa4.32□□□□□ -1.72
BRE4YDL231C TRM112P53738 135 aaPredicted RBP4.32□□□□□ -1.72
BRE4YDL231C YMR209CQ03648 457 aa4.32□□□□□ -1.72
BRE4YDL231C FMP25Q08023 583 aa4.32□□□□□ -1.72
BRE4YDL231C ICL2Q12031 575 aa4.32□□□□□ -1.72
BRE4YDL231C PEX1P24004 1043 aa4.31□□□□□ -1.72
BRE4YDL231C HSM3P38348 480 aa4.31□□□□□ -1.72
BRE4YDL231C ROK1P45818 564 aaPredicted RBP4.31□□□□□ -1.72
BRE4YDL231C GUF1P46943 645 aa4.31□□□□□ -1.72
BRE4YDL231C NUT1P53114 1132 aa4.31□□□□□ -1.72
BRE4YDL231C PCL10P53124 433 aa4.31□□□□□ -1.72
BRE4YDL231C STP1Q00947 519 aa4.31□□□□□ -1.72
BRE4YDL231C SHR3Q02774 210 aa4.31□□□□□ -1.72
BRE4YDL231C AAD15Q08361 143 aa4.31□□□□□ -1.72
BRE4YDL231C PWP1P21304 576 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C BAS1P22035 811 aa4.31□□□□□ -1.72
BRE4YDL231C SAT4P25333 603 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C KAR4P25583 335 aa4.31□□□□□ -1.72
BRE4YDL231C ADY2P25613 283 aa4.31□□□□□ -1.72
BRE4YDL231C YIH1P25637 258 aa4.31□□□□□ -1.72
BRE4YDL231C SFP1P32432 683 aa4.31□□□□□ -1.72
BRE4YDL231C UTR2P32623 467 aa4.31□□□□□ -1.72
BRE4YDL231C YME1P32795 747 aa4.31□□□□□ -1.72
BRE4YDL231C RRP14P36080 434 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C SWC5P38326 303 aa4.31□□□□□ -1.72
BRE4YDL231C UBX7P38349 436 aa4.31□□□□□ -1.72
BRE4YDL231C YIR016WP40572 265 aa4.31□□□□□ -1.72
BRE4YDL231C RPS10BP46784 105 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C TAF12Q03761 539 aa4.31□□□□□ -1.72
BRE4YDL231C THI7Q05998 598 aa4.31□□□□□ -1.72
BRE4YDL231C RPS10AQ08745 105 aaPredicted RBP4.31□□□□□ -1.72
BRE4YDL231C APC9Q12107 265 aa4.31□□□□□ -1.72
BRE4YDL231C NBP2Q12163 236 aa4.31□□□□□ -1.72
BRE4YDL231C RIB2Q12362 591 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C KAR1P11927 433 aa4.31□□□□□ -1.72
BRE4YDL231C GLN3P18494 730 aa4.31□□□□□ -1.72
BRE4YDL231C GCG1P32656 232 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C AIM26P32858 118 aa4.31□□□□□ -1.72
BRE4YDL231C YER186CP40101 306 aa4.31□□□□□ -1.72
BRE4YDL231C CSN12P47130 423 aa4.31□□□□□ -1.72
BRE4YDL231C REX2P54964 269 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C LGE1Q02796 332 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C YPL109CQ02981 657 aa4.31□□□□□ -1.72
BRE4YDL231C ECM7Q06200 448 aa4.31□□□□□ -1.72
BRE4YDL231C SLF1Q12034 447 aaKnown RBP4.31□□□□□ -1.72
BRE4YDL231C RBK1P25332 333 aa4.3□□□□□ -1.72
BRE4YDL231C GID7P25569 745 aa4.3□□□□□ -1.72
BRE4YDL231C TPS2P31688 896 aaKnown RBP4.3□□□□□ -1.72
BRE4YDL231C BUD2P33314 1104 aa4.3□□□□□ -1.72
BRE4YDL231C FZO1P38297 855 aa4.3□□□□□ -1.72
BRE4YDL231C YHL026CP38740 315 aa4.3□□□□□ -1.72
BRE4YDL231C YGR130CP53278 816 aa4.3□□□□□ -1.72
BRE4YDL231C PNG1Q02890 363 aa4.3□□□□□ -1.72
BRE4YDL231C YCS4Q06156 1176 aa4.3□□□□□ -1.72
BRE4YDL231C GPM2Q12008 311 aa4.3□□□□□ -1.72
BRE4YDL231C YLL056CQ12177 298 aa4.3□□□□□ -1.72
BRE4YDL231C AFI1Q99222 893 aa4.3□□□□□ -1.72
BRE4YDL231C SWH1P35845 1188 aa4.3□□□□□ -1.72
BRE4YDL231C RMD8P43620 662 aa4.3□□□□□ -1.72
BRE4YDL231C DUS1P53759 423 aaKnown RBP4.3□□□□□ -1.72
BRE4YDL231C ARP4P80428 489 aa4.3□□□□□ -1.72
BRE4YDL231C DIA2Q08496 732 aaPredicted RBP4.3□□□□□ -1.72
BRE4YDL231C YPR117WQ06116 2489 aa4.3□□□□□ -1.72
BRE4YDL231C RPL24AP04449 155 aaKnown RBP4.3□□□□□ -1.72
BRE4YDL231C YCR015CP25616 317 aa4.3□□□□□ -1.72
BRE4YDL231C ETR1P38071 380 aa4.3□□□□□ -1.72
BRE4YDL231C TRM5P38793 499 aa4.3□□□□□ -1.72
BRE4YDL231C MRX1P40050 688 aa4.3□□□□□ -1.72
BRE4YDL231C RRT5P43607 289 aa4.3□□□□□ -1.72
BRE4YDL231C MNN11P46985 422 aaKnown RBP4.3□□□□□ -1.72
BRE4YDL231C HLJ1P48353 224 aa4.3□□□□□ -1.72
BRE4YDL231C YNL011CP53980 444 aa4.3□□□□□ -1.72
BRE4YDL231C ADI1Q03677 179 aa4.3□□□□□ -1.72
BRE4YDL231C HPT1Q04178 221 aaKnown RBP4.3□□□□□ -1.72
BRE4YDL231C ENT2Q05785 613 aa4.3□□□□□ -1.72
BRE4YDL231C MCM1P11746 286 aa4.29□□□□□ -1.72
BRE4YDL231C PRP16P15938 1071 aaPredicted RBP4.29□□□□□ -1.72
BRE4YDL231C MEF1P25039 761 aa4.29□□□□□ -1.72
BRE4YDL231C URA10P30402 227 aa4.29□□□□□ -1.72
BRE4YDL231C CYM1P32898 989 aa4.29□□□□□ -1.72
BRE4YDL231C STE13P33894 931 aa4.29□□□□□ -1.72
BRE4YDL231C MUM2P38236 366 aa4.29□□□□□ -1.72
BRE4YDL231C ETP1P38748 585 aaKnown RBP4.29□□□□□ -1.72
BRE4YDL231C YHR131CP38835 850 aa4.29□□□□□ -1.72
BRE4YDL231C YEL028WP39989 153 aa4.29□□□□□ -1.72
BRE4YDL231C SEC27P41811 889 aaKnown RBP4.29□□□□□ -1.72
BRE4YDL231C YJR039WP47107 1121 aa4.29□□□□□ -1.72
BRE4YDL231C TAN1P53072 289 aaPredicted RBP4.29□□□□□ -1.72
BRE4YDL231C NNF2P53253 936 aa4.29□□□□□ -1.72
BRE4YDL231C UTP8P53276 713 aaKnown RBP4.29□□□□□ -1.72
BRE4YDL231C VAC7P53950 1165 aa4.29□□□□□ -1.72
BRE4YDL231C YML083CQ04526 418 aa4.29□□□□□ -1.72
BRE4YDL231C RUP1Q12242 671 aa4.29□□□□□ -1.72
BRE4YDL231C DBP10Q12389 995 aaKnown RBP4.29□□□□□ -1.72
BRE4YDL231C ILS1P09436 1072 aaKnown RBP4.29□□□□□ -1.72
BRE4YDL231C POT1P27796 417 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
BRE4YDL231C PPG1P32838 368 aa4.29□□□□□ -1.72
BRE4YDL231C SEC6P32844 805 aa4.29□□□□□ -1.72
BRE4YDL231C TKL2P33315 681 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms