RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W TIM44Q01852 431 aa5.31□□□□□ -1.56
PTC1YDL006W YCG1Q06680 1035 aa5.31□□□□□ -1.56
PTC1YDL006W RRP6Q12149 733 aaKnown RBP5.31□□□□□ -1.56
PTC1YDL006W ACF2Q12168 779 aa5.31□□□□□ -1.56
PTC1YDL006W GAL1P04385 528 aa5.3□□□□□ -1.56
PTC1YDL006W THR1P17423 357 aaKnown RBP5.3□□□□□ -1.56
PTC1YDL006W MSS1P32559 526 aaPredicted RBP5.3□□□□□ -1.56
PTC1YDL006W CDS1P38221 457 aa5.3□□□□□ -1.56
PTC1YDL006W RIM4P38741 713 aa5.3□□□□□ -1.56
PTC1YDL006W CRG1P38892 291 aaRIP-Chip data5.3□□□□□ -1.56not detected
PTC1YDL006W SMX3P54999 86 aaPredicted RBP5.3□□□□□ -1.56
PTC1YDL006W IMH1Q06704 911 aaKnown RBP5.3□□□□□ -1.56
PTC1YDL006W MLH3Q12083 715 aa5.3□□□□□ -1.56
PTC1YDL006W RRP5Q05022 1729 aaKnown RBP5.3□□□□□ -1.56
PTC1YDL006W TY4B-HP0C2J7 1802 aa5.3□□□□□ -1.56
PTC1YDL006W TY4B-JP47024 1803 aa5.3□□□□□ -1.56
PTC1YDL006W RPO41P13433 1351 aaKnown RBP5.29□□□□□ -1.56
PTC1YDL006W RTR1P40084 226 aaPredicted RBP5.29□□□□□ -1.56
PTC1YDL006W ARG2P40360 574 aa5.29□□□□□ -1.56
PTC1YDL006W ASK10P48361 1146 aa5.29□□□□□ -1.56
PTC1YDL006W ATG4P53867 494 aa5.29□□□□□ -1.56
PTC1YDL006W CTF4Q01454 927 aa5.29□□□□□ -1.56
PTC1YDL006W TRI1Q05024 226 aa5.29□□□□□ -1.56
PTC1YDL006W YSH1Q06224 779 aaPredicted RBP5.29□□□□□ -1.56
PTC1YDL006W HBT1Q07653 1046 aaKnown RBP5.29□□□□□ -1.56
PTC1YDL006W NUR1Q12066 484 aa5.29□□□□□ -1.56
PTC1YDL006W ARP7Q12406 477 aa5.29□□□□□ -1.56
PTC1YDL006W TUP1P16649 713 aa5.28□□□□□ -1.56
PTC1YDL006W TGL1P34163 548 aa5.28□□□□□ -1.56
PTC1YDL006W YLF2P38746 405 aa5.28□□□□□ -1.56
PTC1YDL006W KHA1P40309 873 aa5.28□□□□□ -1.56
PTC1YDL006W MAD2P40958 196 aa5.28□□□□□ -1.56
PTC1YDL006W YDL183CP48569 320 aa5.28□□□□□ -1.56
PTC1YDL006W UBX4P54730 416 aa5.28□□□□□ -1.56
PTC1YDL006W CEF1Q03654 590 aaPredicted RBP5.28□□□□□ -1.56
PTC1YDL006W IZH3Q07959 543 aa5.28□□□□□ -1.56
PTC1YDL006W RTK1Q12100 620 aaPredicted RBP5.28□□□□□ -1.56
PTC1YDL006W RSF2P46974 1380 aa5.28□□□□□ -1.56
PTC1YDL006W PET309P32522 965 aaPredicted RBP5.27□□□□□ -1.57
PTC1YDL006W OAR1P35731 278 aa5.27□□□□□ -1.57
PTC1YDL006W RMA1P36001 430 aaKnown RBP5.27□□□□□ -1.57
PTC1YDL006W PCL5P38794 229 aa5.27□□□□□ -1.57
PTC1YDL006W TAH11P47112 604 aa5.27□□□□□ -1.57
PTC1YDL006W UBA2P52488 636 aa5.27□□□□□ -1.57
PTC1YDL006W YNR071CP53757 342 aa5.27□□□□□ -1.57
PTC1YDL006W CEG1Q01159 459 aaPredicted RBP5.27□□□□□ -1.57
PTC1YDL006W YDL086WQ07505 273 aa5.27□□□□□ -1.57
PTC1YDL006W YDL144CQ07589 356 aa5.27□□□□□ -1.57
PTC1YDL006W BMS1Q08965 1183 aaKnown RBP5.27□□□□□ -1.57
PTC1YDL006W USV1Q12132 391 aa5.27□□□□□ -1.57
PTC1YDL006W RPP0P05317 312 aaKnown RBP5.26□□□□□ -1.57
PTC1YDL006W VAS1P07806 1104 aaKnown RBP5.26□□□□□ -1.57
PTC1YDL006W FUB1P25659 250 aa5.26□□□□□ -1.57
PTC1YDL006W NDC80P40460 691 aa5.26□□□□□ -1.57
PTC1YDL006W MPP10P47083 593 aaKnown RBP5.26□□□□□ -1.57
PTC1YDL006W DSD1P53095 428 aa5.26□□□□□ -1.57
PTC1YDL006W RRP46P53256 223 aaPredicted RBP5.26□□□□□ -1.57
PTC1YDL006W YGR151CP53287 111 aa5.26□□□□□ -1.57
PTC1YDL006W MCH5Q08777 521 aa5.26□□□□□ -1.57
PTC1YDL006W DIN7Q12086 430 aa5.26□□□□□ -1.57
PTC1YDL006W HOS1Q12214 470 aa5.26□□□□□ -1.57
PTC1YDL006W YOL114CQ12322 202 aa5.26□□□□□ -1.57
PTC1YDL006W PNS1Q12412 539 aa5.26□□□□□ -1.57
PTC1YDL006W PWP2P25635 923 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W HSP104P31539 908 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W DHR2P36009 735 aaPredicted RBP5.25□□□□□ -1.57
PTC1YDL006W MOH1P38191 138 aa5.25□□□□□ -1.57
PTC1YDL006W YEL025CP39991 1188 aa5.25□□□□□ -1.57
PTC1YDL006W TMN3P40071 706 aa5.25□□□□□ -1.57
PTC1YDL006W SCS2P40075 244 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W VPS27P40343 622 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W QRI7P43122 407 aa5.25□□□□□ -1.57
PTC1YDL006W YGR054WP53235 642 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W MDR1P53258 950 aa5.25□□□□□ -1.57
PTC1YDL006W MUK1Q02866 612 aa5.25□□□□□ -1.57
PTC1YDL006W VMS1Q04311 632 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W BRE1Q07457 700 aaKnown RBP5.25□□□□□ -1.57
PTC1YDL006W YRF1-2P40105 1681 aa5.24□□□□□ -1.57
PTC1YDL006W URA3P03962 267 aa5.24□□□□□ -1.57
PTC1YDL006W PIF1P07271 859 aa5.24□□□□□ -1.57
PTC1YDL006W MSS18P08593 268 aa5.24□□□□□ -1.57
PTC1YDL006W SEC12P11655 471 aa5.24□□□□□ -1.57
PTC1YDL006W PGI1P12709 554 aaKnown RBP5.24□□□□□ -1.57
PTC1YDL006W VPS33P20795 691 aa5.24□□□□□ -1.57
PTC1YDL006W PRD1P25375 712 aa5.24□□□□□ -1.57
PTC1YDL006W VPS24P36095 224 aaKnown RBP5.24□□□□□ -1.57
PTC1YDL006W SET3P36124 751 aa5.24□□□□□ -1.57
PTC1YDL006W APL3P38065 1025 aa5.24□□□□□ -1.57
PTC1YDL006W CBR1P38626 284 aaKnown RBP5.24□□□□□ -1.57
PTC1YDL006W SWD1P39706 426 aa5.24□□□□□ -1.57
PTC1YDL006W BDH2P39713 417 aa5.24□□□□□ -1.57
PTC1YDL006W LRO1P40345 661 aa5.24□□□□□ -1.57
PTC1YDL006W SDS3P40505 327 aa5.24□□□□□ -1.57
PTC1YDL006W HIS6P40545 261 aa5.24□□□□□ -1.57
PTC1YDL006W CTR1P49573 406 aa5.24□□□□□ -1.57
PTC1YDL006W SLI1P53304 468 aa5.24□□□□□ -1.57
PTC1YDL006W TIM50Q02776 476 aa5.24□□□□□ -1.57
PTC1YDL006W YMR206WQ03695 313 aa5.24□□□□□ -1.57
PTC1YDL006W CDC45Q08032 650 aa5.24□□□□□ -1.57
PTC1YDL006W RKI1Q12189 258 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms