RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Nedd1P33215 660 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 CrklP47941 303 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Stim2P83093 746 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Cntnap5bQ0V8T8 1292 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Kmt5aQ2YDW7 349 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Zcchc2Q69ZB8 1166 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Nol11Q8BJW5 723 aaKnown RBP9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 CrbnQ8C7D2 445 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Spon1Q8VCC9 807 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Sned1Q70E20 1403 aa9.04□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Fmnl2A2APV2 1086 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Phactr2B1AVP0 632 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Grb7Q03160 535 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Ppm1gQ61074 542 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Larp6Q8BN59 492 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 ClasrpQ8CFC7 668 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Gulp1Q8K2A1 304 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Champ1Q8K327 802 aaKnown RBP9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Znrd1-asQ8R0E5 213 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Ubxn4Q8VCH8 506 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Nlgn1Q99K10 843 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Otud1Q9CUB6 454 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Rnaseh2aQ9CWY8 301 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Dmrtc1c1Q9D410 238 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Leng1Q9DB98 261 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 NbnQ9R207 751 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Mapk8ip1Q9WVI9 707 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Plch1Q4KWH5 1682 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 CenpjQ569L8 1344 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 FanciQ8K368 1330 aa9.03□□□□□ -0.96
Ccdc47-202ENSMUST00000106865 Kiaa1107Q80TK0 1369 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 TyrobpO54885 114 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Gp6P0C191 313 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Nkx1-2P42580 305 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Rtkn2Q14B46 604 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Eef2kmtQ3UZW7 335 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Trim58Q5NCC9 485 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Phf24Q80TL4 400 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 OptnQ8K3K8 584 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Chmp5Q9D7S9 219 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Igsf1Q7TQA1 1317 aa9.02□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ptpn12P35831 775 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Mapk4Q6P5G0 583 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Dennd6aQ8BH65 605 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 EngaseQ8BX80 734 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Kiaa0319lQ8K135 1048 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Col23a1Q8K4G2 532 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Slc7a13Q91WN3 478 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Adam33Q923W9 797 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Iqcf3Q9D498 203 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 GsdmaQ9EST1 446 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Bcl11aQ9QYE3 773 aa9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Cdk12Q14AX6 1484 aaKnown RBP9.01□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Lama2Q60675 3118 aaKnown RBP9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 IbtkQ6ZPR6 1352 aaKnown RBP9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 MeiocA2AG06 965 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Arid4aF8VPQ2 1261 aaKnown RBP9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Hsp90aa1P07901 733 aaKnown RBP9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Sbk3P0C5K0 361 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Znf48Q3US17 591 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ldlrad2Q3V0V0 142 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Stxbp5lQ5DQR4 1185 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 IgflQ6B9Z0 140 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Camkk2Q8C078 588 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Cdca7lQ922M5 438 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 CactinQ9CS00 772 aaKnown RBP9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Golgb1E9PVZ8 3238 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Cntnap5cQ0V8T7 1305 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Trpm3Q5F4S9 1721 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Col11a2Q64739 1736 aa9□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Gm13040A2A8C4 496 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Plekhd1B2RPU2 505 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 LdhbP16125 334 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Rnf19aP50636 840 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ppfia3P60469 1194 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Msl1Q6PDM1 616 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Adam20Q7M763 760 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Trim61Q8JZK6 461 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Wipi1Q8R3E3 446 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Atl3Q91YH5 541 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ccdc81Q9D5W4 654 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 GmprQ9DCZ1 345 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Upf1Q9EPU0 1124 aaKnown RBP8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Capn12Q9ER56 720 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Znf541Q0GGX2 1363 aa8.99□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ubr3Q5U430 1889 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 NudcO35685 332 aaKnown RBP8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Cd200O54901 278 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Hmgb2P30681 210 aaKnown RBP8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Gabpb2P81069 414 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Jdp2P97875 163 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 NracQ8BNX7 165 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Shisa2Q8QZV2 295 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Rps6ka4Q9Z2B9 773 aa8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Elp1Q7TT37 1333 aaKnown RBP8.98□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Togaram1Q6A070 1776 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Rbm25B2RY56 838 aaKnown RBP8.97□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Fam46aD3Z5S8 447 aa8.97□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Best3Q6H1V1 669 aa8.97□□□□□ -0.97
Ccdc47-202ENSMUST00000106865 Ccdc154Q6RUT8 657 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms