Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm25239-201ENSMUST00000174915 86 ntBASIC40.83■■■■■ 4.13
Trim61Q8JZK6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Trim61Q8JZK6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
Trim61Q8JZK6 Gm15042-201ENSMUST00000120212 883 ntBASIC35.58■■■■□ 3.29
Trim61Q8JZK6 Gm24109-201ENSMUST00000175489 103 ntBASIC35.43■■■■□ 3.26
Trim61Q8JZK6 Gm15045-201ENSMUST00000117359 883 ntBASIC34.76■■■■□ 3.16
Trim61Q8JZK6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Trim61Q8JZK6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Trim61Q8JZK6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Trim61Q8JZK6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Trim61Q8JZK6 Gm23366-201ENSMUST00000175022 89 ntBASIC34.11■■■■□ 3.05
Trim61Q8JZK6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Trim61Q8JZK6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Trim61Q8JZK6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Trim61Q8JZK6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
Trim61Q8JZK6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.08■■■□□ 2.89
Trim61Q8JZK6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
Trim61Q8JZK6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.83■■■□□ 2.85
Trim61Q8JZK6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.76■■■□□ 2.83
Trim61Q8JZK6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Trim61Q8JZK6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Trim61Q8JZK6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Trim61Q8JZK6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.55■■■□□ 2.8
Trim61Q8JZK6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Trim61Q8JZK6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Trim61Q8JZK6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Trim61Q8JZK6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Trim61Q8JZK6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.29■■■□□ 2.76
Trim61Q8JZK6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Trim61Q8JZK6 Gm25238-201ENSMUST00000174914 89 ntBASIC32.26■■■□□ 2.75
Trim61Q8JZK6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
Trim61Q8JZK6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim61Q8JZK6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.95■■■□□ 2.7
Trim61Q8JZK6 Psd-208ENSMUST00000224556 2034 ntBASIC31.92■■■□□ 2.7
Trim61Q8JZK6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim61Q8JZK6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Trim61Q8JZK6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Trim61Q8JZK6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
Trim61Q8JZK6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Trim61Q8JZK6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Trim61Q8JZK6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.41■■■□□ 2.62
Trim61Q8JZK6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trim61Q8JZK6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Trim61Q8JZK6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Trim61Q8JZK6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.29■■■□□ 2.6
Trim61Q8JZK6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.28■■■□□ 2.6
Trim61Q8JZK6 Gm27325-201ENSMUST00000175467 74 ntBASIC31.15■■■□□ 2.58
Trim61Q8JZK6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.05■■■□□ 2.56
Trim61Q8JZK6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Trim61Q8JZK6 Gm25262-201ENSMUST00000174934 133 ntBASIC30.99■■■□□ 2.55
Trim61Q8JZK6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trim61Q8JZK6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trim61Q8JZK6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trim61Q8JZK6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.73■■■□□ 2.51
Trim61Q8JZK6 Rab21-202ENSMUST00000218831 843 ntBASIC30.68■■■□□ 2.5
Trim61Q8JZK6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trim61Q8JZK6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Trim61Q8JZK6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.61■■■□□ 2.49
Trim61Q8JZK6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.6■■■□□ 2.49
Trim61Q8JZK6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.54■■■□□ 2.48
Trim61Q8JZK6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Trim61Q8JZK6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.46■■■□□ 2.47
Trim61Q8JZK6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Trim61Q8JZK6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Trim61Q8JZK6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.4■■■□□ 2.46
Trim61Q8JZK6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Trim61Q8JZK6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Trim61Q8JZK6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Trim61Q8JZK6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Trim61Q8JZK6 Gm26115-201ENSMUST00000175605 87 ntBASIC30.26■■■□□ 2.43
Trim61Q8JZK6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.23■■■□□ 2.43
Trim61Q8JZK6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
Trim61Q8JZK6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.2■■■□□ 2.42
Trim61Q8JZK6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Trim61Q8JZK6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trim61Q8JZK6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Trim61Q8JZK6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Trim61Q8JZK6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Trim61Q8JZK6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
Trim61Q8JZK6 Gm8109-201ENSMUST00000194076 746 ntBASIC30.07■■■□□ 2.4
Trim61Q8JZK6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trim61Q8JZK6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Trim61Q8JZK6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Trim61Q8JZK6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Trim61Q8JZK6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Trim61Q8JZK6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
Trim61Q8JZK6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.94■■■□□ 2.38
Trim61Q8JZK6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Trim61Q8JZK6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Trim61Q8JZK6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Trim61Q8JZK6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Trim61Q8JZK6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.81■■■□□ 2.36
Trim61Q8JZK6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Trim61Q8JZK6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Trim61Q8JZK6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Trim61Q8JZK6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Trim61Q8JZK6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.68■■■□□ 2.34
Trim61Q8JZK6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Trim61Q8JZK6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Trim61Q8JZK6 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.66■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms