RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 DCW1P36091 449 aa7.48□□□□□ -1.21
snR41snR41 BMT6Q12291 365 aa7.48□□□□□ -1.21
snR41snR41 PTC3P34221 468 aaKnown RBP7.47□□□□□ -1.21
snR41snR41 GRE2Q12068 342 aaKnown RBP7.47□□□□□ -1.21
snR41snR41 NOP53Q12080 455 aaKnown RBP7.46□□□□□ -1.22
snR41snR41 PTC4P38089 393 aa7.45□□□□□ -1.22
snR41snR41 GUT1P32190 709 aa7.44□□□□□ -1.22
snR41snR41 YEL023CP39992 682 aa7.42□□□□□ -1.22
snR41snR41 ATH1P48016 1211 aa7.42□□□□□ -1.22
snR41snR41 TFG1P41895 735 aaPredicted RBP7.39□□□□□ -1.23
snR41snR41 NST1P53935 1240 aa7.39□□□□□ -1.23
snR41snR41 YDL129WQ07555 291 aa7.37□□□□□ -1.23
snR41snR41 SOL3P38858 249 aa7.35□□□□□ -1.23
snR41snR41 SAP30P38429 201 aa7.31□□□□□ -1.24
snR41snR41 AI4P03878 556 aa7.3□□□□□ -1.24
snR41snR41 MPH3P0CE00 602 aa7.3□□□□□ -1.24
snR41snR41 SET1P38827 1080 aaKnown RBP7.28□□□□□ -1.24
snR41snR41 YGR273CP53329 174 aa7.27□□□□□ -1.25
snR41snR41 PML39Q03760 334 aa7.27□□□□□ -1.25
snR41snR41 CHL1P22516 861 aaPredicted RBP7.25□□□□□ -1.25
snR41snR41 PRE3P38624 215 aa7.24□□□□□ -1.25
snR41snR41 ILV3P39522 585 aaKnown RBP7.24□□□□□ -1.25
snR41snR41 MID1P41821 548 aa7.19□□□□□ -1.26
snR41snR41 ARH1P48360 493 aa7.18□□□□□ -1.26
snR41snR41 YDR344CQ05510 147 aa7.18□□□□□ -1.26
snR41snR41 IFH1P39520 1085 aa7.16□□□□□ -1.26
snR41snR41 KEX1P09620 729 aa7.14□□□□□ -1.27
snR41snR41 BCK2P33306 851 aa7.14□□□□□ -1.27
snR41snR41 ELP4Q02884 456 aaKnown RBP7.14□□□□□ -1.27
snR41snR41 YPR148CQ06523 435 aa7.14□□□□□ -1.27
snR41snR41 UBP14P38237 781 aaKnown RBP7.13□□□□□ -1.27
snR41snR41 SLI15P38283 698 aa7.13□□□□□ -1.27
snR41snR41 PEX29Q03370 554 aa7.11□□□□□ -1.27
snR41snR41 YLR326WQ06170 240 aaKnown RBP7.11□□□□□ -1.27
snR41snR41 MPC54Q08550 464 aa7.1□□□□□ -1.27
snR41snR41 SPT23P35210 1082 aa7.09□□□□□ -1.27
snR41snR41 HAP5Q02516 242 aa7.08□□□□□ -1.28
snR41snR41 VHR2P40041 505 aa7.06□□□□□ -1.28
snR41snR41 BNI4P53858 892 aa7.06□□□□□ -1.28
snR41snR41 DPL1Q05567 589 aa7.06□□□□□ -1.28
snR41snR41 VRP1P37370 817 aa7.04□□□□□ -1.28
snR41snR41 PCS60P38137 543 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
snR41snR41 NMA111P53920 997 aa7.04□□□□□ -1.28
snR41snR41 XDJ1P39102 459 aa7.03□□□□□ -1.28
snR41snR41 YDR090CQ03193 310 aa7.03□□□□□ -1.28
snR41snR41 RAD54P32863 898 aa7.02□□□□□ -1.29
snR41snR41 REF2P42073 533 aaPredicted RBP7.02□□□□□ -1.29
snR41snR41 YML082WQ04533 649 aaKnown RBP7.02□□□□□ -1.29
snR41snR41 ISU2Q12056 156 aa7.01□□□□□ -1.29
snR41snR41 CDC73Q06697 393 aa6.99□□□□□ -1.29
snR41snR41 PTC2P39966 464 aaKnown RBP6.98□□□□□ -1.29
snR41snR41 VPS70P47161 811 aa6.97□□□□□ -1.29
snR41snR41 MAK21Q12176 1025 aaKnown RBP6.95□□□□□ -1.3
snR41snR41 RPP1BP10622 106 aaKnown RBP6.94□□□□□ -1.3
snR41snR41 RAM1P22007 431 aa6.94□□□□□ -1.3
snR41snR41 COX6P00427 148 aa6.93□□□□□ -1.3
snR41snR41 GAP1P19145 602 aaPredicted RBP6.93□□□□□ -1.3
snR41snR41 KIC1P38692 1080 aa6.93□□□□□ -1.3
snR41snR41 DMA1P38823 416 aa6.92□□□□□ -1.3
snR41snR41 CKB1P43639 278 aa6.91□□□□□ -1.3
snR41snR41 SAS10Q12136 610 aaPredicted RBP6.91□□□□□ -1.3
snR41snR41 YPR015CQ12531 247 aa6.9□□□□□ -1.3
snR41snR41 CSC1Q06538 782 aa6.88□□□□□ -1.31
snR41snR41 ORC6P38826 435 aa6.87□□□□□ -1.31
snR41snR41 TFB4Q12004 338 aa6.87□□□□□ -1.31
snR41snR41 PDR1P12383 1068 aa6.85□□□□□ -1.31
snR41snR41 DPS1P04802 557 aaKnown RBP6.82□□□□□ -1.32
snR41snR41 PBS2P08018 668 aa6.82□□□□□ -1.32
snR41snR41 PEX21P50091 288 aa6.81□□□□□ -1.32
snR41snR41 YRR1Q12172 810 aa6.81□□□□□ -1.32
snR41snR41 MVP1P40959 511 aaKnown RBP6.79□□□□□ -1.32
snR41snR41 SAS4Q04003 481 aa6.79□□□□□ -1.32
snR41snR41 RGR1P19263 1082 aa6.77□□□□□ -1.33
snR41snR41 DSF2P38213 736 aa6.77□□□□□ -1.33
snR41snR41 BUD20Q08004 166 aaPredicted RBP6.77□□□□□ -1.33
snR41snR41 TUM1Q08686 304 aaKnown RBP6.77□□□□□ -1.33
snR41snR41 GYP1Q08484 637 aa6.76□□□□□ -1.33
snR41snR41 STR2P47164 639 aa6.75□□□□□ -1.33
snR41snR41 NUD1P32336 851 aa6.74□□□□□ -1.33
snR41snR41 PSE1P32337 1089 aaKnown RBP6.74□□□□□ -1.33
snR41snR41 ISM1P48526 1002 aa6.74□□□□□ -1.33
snR41snR41 SDH2P21801 266 aa6.73□□□□□ -1.33
snR41snR41 YPR109WQ06104 294 aa6.73□□□□□ -1.33
snR41snR41 MAM3Q12296 706 aa6.73□□□□□ -1.33
snR41snR41 PRT1P06103 763 aaKnown RBP6.72□□□□□ -1.33
snR41snR41 RAS1P01119 309 aa6.69□□□□□ -1.34
snR41snR41 AMS1P22855 1083 aa6.69□□□□□ -1.34
snR41snR41 SRC1Q03707 834 aa6.69□□□□□ -1.34
snR41snR41 MRF1P30775 413 aaPredicted RBP6.68□□□□□ -1.34
snR41snR41 NPL4P33755 580 aa6.68□□□□□ -1.34
snR41snR41 NUP42P49686 430 aaKnown RBP6.68□□□□□ -1.34
snR41snR41 TY1A-DR4O74302 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-HP0C2I4 478 aaKnown RBP6.67□□□□□ -1.34
snR41snR41 TY1A-AP0CX57 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-PR1P0CX58 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-ORP0CX59 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-PR2P0CX60 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-DR5P0CX65 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-ER2P0CX66 440 aa6.67□□□□□ -1.34
snR41snR41 TY1A-GR3P0CX67 440 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms