RNA–Protein interactions for RNA: snR31

snR31, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR31, Length 225 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR31snR31 TY1B-LR1Q12088 1755 aaKnown RBP12.39□□□□□ -0.43
snR31snR31 TY1B-NL1Q12112 1755 aa12.39□□□□□ -0.43
snR31snR31 TY1B-GR1Q12141 1755 aa12.39□□□□□ -0.43
snR31snR31 TY1B-BLQ12490 1755 aa12.39□□□□□ -0.43
snR31snR31 GEA1P47102 1408 aaPredicted RBP12.37□□□□□ -0.43
snR31snR31 ULS1Q08562 1619 aa12.37□□□□□ -0.43
snR31snR31 IKI3Q06706 1349 aaKnown RBP12.36□□□□□ -0.43
snR31snR31 NTE1Q04958 1679 aa12.35□□□□□ -0.43
snR31snR31 GEA2P39993 1459 aaKnown RBP12.33□□□□□ -0.44
snR31snR31 MET5P47169 1442 aa12.31□□□□□ -0.44
snR31snR31 NUP159P40477 1460 aa12.31□□□□□ -0.44
snR31snR31 RPO21P04050 1733 aaKnown RBP12.31□□□□□ -0.44
snR31snR31 MET10P39692 1035 aa12.24□□□□□ -0.45
snR31snR31 CAT8P39113 1433 aa12.23□□□□□ -0.45
snR31snR31 VPS15P22219 1454 aa12.21□□□□□ -0.46
snR31snR31 IRC20Q06554 1556 aa12.19□□□□□ -0.46
snR31snR31 NUP170P38181 1502 aa12.16□□□□□ -0.46
snR31snR31 PDR12Q02785 1511 aa12.14□□□□□ -0.47
snR31snR31 TY3B-GQ99315 1547 aa12.14□□□□□ -0.47
snR31snR31 YRF1-1P0CX20 1796 aa12.11□□□□□ -0.47
snR31snR31 YRF1-5P0CX21 1796 aa12.11□□□□□ -0.47
snR31snR31 YRF1-8P0CX22 1796 aa12.11□□□□□ -0.47
snR31snR31 YBT1P32386 1661 aa12.11□□□□□ -0.47
snR31snR31 NUP157P40064 1391 aaKnown RBP12.09□□□□□ -0.47
snR31snR31 SSM4P40318 1319 aa12.09□□□□□ -0.47
snR31snR31 GDB1Q06625 1536 aa12.07□□□□□ -0.48
snR31snR31 SPO14P36126 1683 aa12.06□□□□□ -0.48
snR31snR31 PDR10P51533 1564 aa12.06□□□□□ -0.48
snR31snR31 CKB1P43639 278 aa12.06□□□□□ -0.48
snR31snR31 LTE1P07866 1435 aa12.05□□□□□ -0.48
snR31snR31 SRB8P25648 1427 aa12.04□□□□□ -0.48
snR31snR31 ARO1P08566 1588 aaKnown RBP12.01□□□□□ -0.49
snR31snR31 BUD3P25558 1636 aa12□□□□□ -0.49
snR31snR31 IQG1Q12280 1495 aa11.98□□□□□ -0.49
snR31snR31 MMS1Q06211 1407 aa11.95□□□□□ -0.5
snR31snR31 BUD21Q08492 214 aaPredicted RBP11.95□□□□□ -0.5
snR31snR31 DRS2P39524 1355 aa11.92□□□□□ -0.5
snR31snR31 YSP2Q06681 1438 aa11.88□□□□□ -0.51
snR31snR31 TRM3Q07527 1436 aa11.86□□□□□ -0.51
snR31snR31 BNR1P40450 1375 aa11.86□□□□□ -0.51
snR31snR31 SEC7P11075 2009 aaKnown RBP11.82□□□□□ -0.52
snR31snR31 GCN2P15442 1659 aa11.81□□□□□ -0.52
snR31snR31 DOP1Q03921 1698 aa11.8□□□□□ -0.52
snR31snR31 PAF1P38351 445 aa11.76□□□□□ -0.53
snR31snR31 NOP7P53261 605 aaKnown RBP11.75□□□□□ -0.53
snR31snR31 ITT1Q04638 464 aa11.75□□□□□ -0.53
snR31snR31 CHC1P22137 1653 aaKnown RBP11.71□□□□□ -0.53
snR31snR31 URN1Q06525 465 aaKnown RBP11.68□□□□□ -0.54
snR31snR31 BNI1P41832 1953 aa11.67□□□□□ -0.54
snR31snR31 POL5P39985 1022 aaKnown RBP11.63□□□□□ -0.55
snR31snR31 BFR2Q06631 534 aaKnown RBP11.63□□□□□ -0.55
snR31snR31 YOR093CQ12275 1648 aa11.63□□□□□ -0.55
snR31snR31 PDR5P33302 1511 aaKnown RBP11.6□□□□□ -0.55
snR31snR31 DNF2Q12675 1612 aa11.57□□□□□ -0.56
snR31snR31 NUP188P52593 1655 aaKnown RBP11.56□□□□□ -0.56
snR31snR31 RAV1P47104 1357 aa11.54□□□□□ -0.56
snR31snR31 IML1P47170 1584 aa11.53□□□□□ -0.56
snR31snR31 RTC1Q08281 1341 aa11.51□□□□□ -0.57
snR31snR31 VMR1P38735 1592 aa11.5□□□□□ -0.57
snR31snR31 YAP3P38749 330 aa11.5□□□□□ -0.57
snR31snR31 IPL1P38991 367 aa11.5□□□□□ -0.57
snR31snR31 SCT1P32784 759 aa11.49□□□□□ -0.57
snR31snR31 ESL2P36168 1195 aa11.45□□□□□ -0.58
snR31snR31 PDR11P40550 1411 aa11.43□□□□□ -0.58
snR31snR31 TYS1P36421 394 aaKnown RBP11.41□□□□□ -0.58
snR31snR31 ABP1P15891 592 aaKnown RBP11.4□□□□□ -0.58
snR31snR31 SEC3P33332 1336 aaKnown RBP11.39□□□□□ -0.59
snR31snR31 TAF5P38129 798 aa11.38□□□□□ -0.59
snR31snR31 HAP1P0CE41 1502 aa11.38□□□□□ -0.59
snR31snR31 NAP1P25293 417 aaKnown RBP11.36□□□□□ -0.59
snR31snR31 TY3B-IQ7LHG5 1498 aaKnown RBP11.35□□□□□ -0.59
snR31snR31 MHP1P43638 1398 aa11.33□□□□□ -0.6
snR31snR31 ORC1P54784 914 aaPredicted RBP11.33□□□□□ -0.6
snR31snR31 KIP3P53086 805 aaKnown RBP11.32□□□□□ -0.6
snR31snR31 DNF3Q12674 1656 aa11.3□□□□□ -0.6
snR31snR31 ALD4P46367 519 aaKnown RBP11.3□□□□□ -0.6
snR31snR31 MRX12P47084 519 aa11.28□□□□□ -0.6
snR31snR31 NUP192P47054 1683 aa11.27□□□□□ -0.61
snR31snR31 MAK10Q02197 733 aa11.26□□□□□ -0.61
snR31snR31 SPE2P21182 396 aa11.25□□□□□ -0.61
snR31snR31 YLR419WQ06698 1435 aaKnown RBP11.24□□□□□ -0.61
snR31snR31 BCK1Q01389 1478 aa11.24□□□□□ -0.61
snR31snR31 ENP1P38333 483 aaKnown RBP11.23□□□□□ -0.61
snR31snR31 TAF8Q03750 510 aa11.23□□□□□ -0.61
snR31snR31 RAD9P14737 1309 aa11.22□□□□□ -0.61
snR31snR31 CAB1Q04430 367 aa11.22□□□□□ -0.61
snR31snR31 PDS5Q04264 1277 aa11.2□□□□□ -0.62
snR31snR31 SPT7P35177 1332 aa11.19□□□□□ -0.62
snR31snR31 CHZ1P40019 153 aaPredicted RBP11.15□□□□□ -0.62
snR31snR31 RIA1P53893 1110 aa11.15□□□□□ -0.62
snR31snR31 KRE5P22023 1365 aa11.14□□□□□ -0.63
snR31snR31 CFT1Q06632 1357 aaKnown RBP11.14□□□□□ -0.63
snR31snR31 TY1B-NL2Q99337 1749 aaKnown RBP11.11□□□□□ -0.63
snR31snR31 NSR1P27476 414 aaKnown RBP RIP-Chip data11.1□□□□□ -0.63not detected
snR31snR31 PSD2P53037 1138 aaKnown RBP11.1□□□□□ -0.63
snR31snR31 YMR196WQ04336 1088 aa11.08□□□□□ -0.64
snR31snR31 LEU3P08638 886 aa11.07□□□□□ -0.64
snR31snR31 MLP1Q02455 1875 aaKnown RBP11.05□□□□□ -0.64
snR31snR31 MIF2P35201 549 aa11.04□□□□□ -0.64
snR31snR31 FKH1P40466 484 aa11.04□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms