RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C PIB1Q06651 286 aa11.57□□□□□ -0.56
YTH1YPR107C GRE2Q12068 342 aaKnown RBP11.57□□□□□ -0.56
YTH1YPR107C GUT1P32190 709 aa11.55□□□□□ -0.56
YTH1YPR107C VHR2P40041 505 aa11.53□□□□□ -0.56
YTH1YPR107C KIC1P38692 1080 aa11.52□□□□□ -0.57
YTH1YPR107C ABP1P15891 592 aaKnown RBP11.5□□□□□ -0.57
YTH1YPR107C UBP14P38237 781 aaKnown RBP11.49□□□□□ -0.57
YTH1YPR107C GUA1P38625 525 aaKnown RBP11.48□□□□□ -0.57
YTH1YPR107C YDR090CQ03193 310 aa11.48□□□□□ -0.57
YTH1YPR107C SAM3Q08986 587 aa11.48□□□□□ -0.57
YTH1YPR107C HPC2Q01448 625 aa11.47□□□□□ -0.57
YTH1YPR107C YLR326WQ06170 240 aaKnown RBP11.46□□□□□ -0.57
YTH1YPR107C YGR273CP53329 174 aa11.44□□□□□ -0.58
YTH1YPR107C GYP5Q12344 894 aa11.42□□□□□ -0.58
YTH1YPR107C PSE1P32337 1089 aaKnown RBP11.41□□□□□ -0.58
YTH1YPR107C RAD54P32863 898 aa11.41□□□□□ -0.58
YTH1YPR107C GTT3P39996 337 aa11.38□□□□□ -0.59
YTH1YPR107C KEX1P09620 729 aa11.36□□□□□ -0.59
YTH1YPR107C MST1P07236 462 aa11.35□□□□□ -0.59
YTH1YPR107C SSA2P10592 639 aaKnown RBP11.35□□□□□ -0.59
YTH1YPR107C BRL1P38770 471 aa11.34□□□□□ -0.59
YTH1YPR107C PCS60P38137 543 aaKnown RBP RIP-Chip data11.32□□□□□ -0.6not detected
YTH1YPR107C TFB3Q03290 321 aa11.31□□□□□ -0.6
YTH1YPR107C SOL3P38858 249 aa11.3□□□□□ -0.6
YTH1YPR107C CSN12P47130 423 aa11.28□□□□□ -0.6
YTH1YPR107C DCW1P36091 449 aa11.26□□□□□ -0.61
YTH1YPR107C TEA1P47988 759 aa11.25□□□□□ -0.61
YTH1YPR107C HTA1P04911 132 aaKnown RBP11.24□□□□□ -0.61
YTH1YPR107C HTA2P04912 132 aa11.24□□□□□ -0.61
YTH1YPR107C ORC6P38826 435 aa11.24□□□□□ -0.61
YTH1YPR107C YOL036WQ08206 761 aa11.24□□□□□ -0.61
YTH1YPR107C CLB5P30283 435 aa11.22□□□□□ -0.61
YTH1YPR107C AI4P03878 556 aa11.21□□□□□ -0.61
YTH1YPR107C NST1P53935 1240 aa11.21□□□□□ -0.61
YTH1YPR107C MSB4Q12317 492 aa11.2□□□□□ -0.62
YTH1YPR107C MPH3P0CE00 602 aa11.19□□□□□ -0.62
YTH1YPR107C RPP1BP10622 106 aaKnown RBP11.19□□□□□ -0.62
YTH1YPR107C SET4P42948 560 aa11.18□□□□□ -0.62
YTH1YPR107C RGR1P19263 1082 aa11.14□□□□□ -0.63
YTH1YPR107C PKC1P24583 1151 aa11.14□□□□□ -0.63
YTH1YPR107C MVP1P40959 511 aaKnown RBP11.11□□□□□ -0.63
YTH1YPR107C CSC1Q06538 782 aa11.11□□□□□ -0.63
YTH1YPR107C ILV3P39522 585 aaKnown RBP11.09□□□□□ -0.63
YTH1YPR107C EAP1P36041 632 aaKnown RBP11.08□□□□□ -0.64
YTH1YPR107C YJL007CP47080 104 aa11.08□□□□□ -0.64
YTH1YPR107C YEL023CP39992 682 aa11.07□□□□□ -0.64
YTH1YPR107C BIM1P40013 344 aa11.07□□□□□ -0.64
YTH1YPR107C DAN4P47179 1161 aa11.07□□□□□ -0.64
YTH1YPR107C YMR196WQ04336 1088 aa11.07□□□□□ -0.64
YTH1YPR107C GAP1P19145 602 aaPredicted RBP11.06□□□□□ -0.64
YTH1YPR107C GLN1P32288 370 aaKnown RBP11.06□□□□□ -0.64
YTH1YPR107C KTR1P27810 393 aaKnown RBP11.05□□□□□ -0.64
YTH1YPR107C SLI15P38283 698 aa11.05□□□□□ -0.64
YTH1YPR107C RPL34BP40525 121 aaKnown RBP11.04□□□□□ -0.64
YTH1YPR107C HST2P53686 357 aa11.04□□□□□ -0.64
YTH1YPR107C YBL036CP38197 257 aa11.03□□□□□ -0.64
YTH1YPR107C TYW1Q08960 810 aaKnown RBP11.03□□□□□ -0.64
YTH1YPR107C TFB4Q12004 338 aa11.03□□□□□ -0.64
YTH1YPR107C FPK1P53739 893 aa11.02□□□□□ -0.65
YTH1YPR107C NIS1P53939 407 aa11.02□□□□□ -0.65
YTH1YPR107C PTC4P38089 393 aa11.01□□□□□ -0.65
YTH1YPR107C ATG32P40458 529 aa11.01□□□□□ -0.65
YTH1YPR107C YPR109WQ06104 294 aa11.01□□□□□ -0.65
YTH1YPR107C SSA1P10591 642 aaKnown RBP11□□□□□ -0.65
YTH1YPR107C PEX21P50091 288 aa11□□□□□ -0.65
YTH1YPR107C WSC3Q12215 556 aa11□□□□□ -0.65
YTH1YPR107C MMP1Q12372 583 aa10.99□□□□□ -0.65
YTH1YPR107C JIP4Q03361 876 aa10.98□□□□□ -0.65
YTH1YPR107C CSE4P36012 229 aa10.97□□□□□ -0.65
YTH1YPR107C SSA4P22202 642 aaKnown RBP10.96□□□□□ -0.65
YTH1YPR107C SUB2Q07478 446 aaKnown RBP10.96□□□□□ -0.65
YTH1YPR107C PKH3Q03306 898 aaPredicted RBP10.95□□□□□ -0.66
YTH1YPR107C TRP5P00931 707 aaKnown RBP10.94□□□□□ -0.66
YTH1YPR107C TIF1P10081 395 aaKnown RBP10.94□□□□□ -0.66
YTH1YPR107C GEF1P37020 779 aa10.94□□□□□ -0.66
YTH1YPR107C CDC73Q06697 393 aa10.94□□□□□ -0.66
YTH1YPR107C RAD59Q12223 238 aa10.94□□□□□ -0.66
YTH1YPR107C SIT4P20604 311 aa10.92□□□□□ -0.66
YTH1YPR107C ESS1P22696 170 aa10.91□□□□□ -0.66
YTH1YPR107C BIO2P32451 375 aa10.88□□□□□ -0.67
YTH1YPR107C TUM1Q08686 304 aaKnown RBP10.88□□□□□ -0.67
YTH1YPR107C ARG8P18544 423 aa10.86□□□□□ -0.67
YTH1YPR107C SCJ1P25303 377 aa10.86□□□□□ -0.67
YTH1YPR107C DPL1Q05567 589 aa10.86□□□□□ -0.67
YTH1YPR107C SPT5P27692 1063 aaKnown RBP10.85□□□□□ -0.67
YTH1YPR107C RTG2P32608 588 aaKnown RBP10.85□□□□□ -0.67
YTH1YPR107C ULI1P43604 169 aa10.85□□□□□ -0.67
YTH1YPR107C YPR204WQ08995 1032 aa10.85□□□□□ -0.67
YTH1YPR107C TIF11P38912 153 aaKnown RBP10.84□□□□□ -0.67
YTH1YPR107C ERG12P07277 443 aa10.83□□□□□ -0.68
YTH1YPR107C VNX1P42839 908 aa10.83□□□□□ -0.68
YTH1YPR107C YJU3P28321 313 aa10.82□□□□□ -0.68
YTH1YPR107C RTF1P53064 558 aa10.82□□□□□ -0.68
YTH1YPR107C LAM6Q08001 693 aa10.82□□□□□ -0.68
YTH1YPR107C SLX8P40072 274 aa10.81□□□□□ -0.68
YTH1YPR107C YNL108CP53929 270 aa10.81□□□□□ -0.68
YTH1YPR107C YML020WQ03722 664 aa10.81□□□□□ -0.68
YTH1YPR107C YBL029C-AQ3E756 94 aa10.81□□□□□ -0.68
YTH1YPR107C TTI1P36097 1038 aa10.8□□□□□ -0.68
YTH1YPR107C ISU2Q12056 156 aa10.8□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms