RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W NTE1Q04958 1679 aa17.03■□□□□ 0.32
MSF1YPR047W TSC11P40061 1430 aa17.02■□□□□ 0.32
MSF1YPR047W VTH1P40438 1549 aa17.01■□□□□ 0.31
MSF1YPR047W VTH2P40890 1549 aa17.01■□□□□ 0.31
MSF1YPR047W VPS15P22219 1454 aa16.98■□□□□ 0.31
MSF1YPR047W RPO21P04050 1733 aaKnown RBP16.94■□□□□ 0.3
MSF1YPR047W DRS2P39524 1355 aa16.89■□□□□ 0.29
MSF1YPR047W MYO4P32492 1471 aa16.89■□□□□ 0.29
MSF1YPR047W MMS1Q06211 1407 aa16.88■□□□□ 0.29
MSF1YPR047W ABP1P15891 592 aaKnown RBP16.81■□□□□ 0.28
MSF1YPR047W YTA7P40340 1379 aa16.8■□□□□ 0.28
MSF1YPR047W SNQ2P32568 1501 aaKnown RBP16.78■□□□□ 0.28
MSF1YPR047W SNT2P53127 1403 aa16.75■□□□□ 0.27
MSF1YPR047W NUP170P38181 1502 aa16.67■□□□□ 0.26
MSF1YPR047W STH1P32597 1359 aa16.67■□□□□ 0.26
MSF1YPR047W IRC20Q06554 1556 aa16.66■□□□□ 0.26
MSF1YPR047W MET10P39692 1035 aa16.62■□□□□ 0.25
MSF1YPR047W SPO14P36126 1683 aa16.61■□□□□ 0.25
MSF1YPR047W DNF2Q12675 1612 aa16.61■□□□□ 0.25
MSF1YPR047W ULS1Q08562 1619 aa16.6■□□□□ 0.25
MSF1YPR047W PDR12Q02785 1511 aa16.55■□□□□ 0.24
MSF1YPR047W RTT106P40161 455 aa16.54■□□□□ 0.24
MSF1YPR047W MLP2P40457 1679 aa16.52■□□□□ 0.24
MSF1YPR047W YFR006WP43590 535 aa16.51■□□□□ 0.23
MSF1YPR047W GDB1Q06625 1536 aa16.45■□□□□ 0.22
MSF1YPR047W DOP1Q03921 1698 aa16.43■□□□□ 0.22
MSF1YPR047W IQG1Q12280 1495 aa16.42■□□□□ 0.22
MSF1YPR047W TRM3Q07527 1436 aa16.39■□□□□ 0.21
MSF1YPR047W NUP157P40064 1391 aaKnown RBP16.39■□□□□ 0.21
MSF1YPR047W PDR15Q04182 1529 aaKnown RBP16.38■□□□□ 0.21
MSF1YPR047W PDR10P51533 1564 aa16.37■□□□□ 0.21
MSF1YPR047W BUD3P25558 1636 aa16.32■□□□□ 0.2
MSF1YPR047W SAS10Q12136 610 aaPredicted RBP16.29■□□□□ 0.2
MSF1YPR047W YOR093CQ12275 1648 aa16.22■□□□□ 0.19
MSF1YPR047W TAF7Q05021 590 aa16.21■□□□□ 0.19
MSF1YPR047W CHC1P22137 1653 aaKnown RBP16.18■□□□□ 0.18
MSF1YPR047W ARO1P08566 1588 aaKnown RBP16.17■□□□□ 0.18
MSF1YPR047W IFH1P39520 1085 aa16.13■□□□□ 0.17
MSF1YPR047W CAT8P39113 1433 aa16.08■□□□□ 0.16
MSF1YPR047W GEA1P47102 1408 aaPredicted RBP16.05■□□□□ 0.16
MSF1YPR047W YBT1P32386 1661 aa16.03■□□□□ 0.16
MSF1YPR047W SEC7P11075 2009 aaKnown RBP16.01■□□□□ 0.15
MSF1YPR047W TY3B-GQ99315 1547 aa16.01■□□□□ 0.15
MSF1YPR047W DNF3Q12674 1656 aa15.98■□□□□ 0.15
MSF1YPR047W YSP2Q06681 1438 aa15.93■□□□□ 0.14
MSF1YPR047W CKB1P43639 278 aa15.91■□□□□ 0.14
MSF1YPR047W BNR1P40450 1375 aa15.89■□□□□ 0.13
MSF1YPR047W YAP3P38749 330 aa15.87■□□□□ 0.13
MSF1YPR047W MAK10Q02197 733 aa15.72■□□□□ 0.11
MSF1YPR047W URN1Q06525 465 aaKnown RBP15.71■□□□□ 0.11
MSF1YPR047W SRB8P25648 1427 aa15.67■□□□□ 0.1
MSF1YPR047W USO1P25386 1790 aa15.6■□□□□ 0.09
MSF1YPR047W BUD21Q08492 214 aaPredicted RBP15.52■□□□□ 0.08
MSF1YPR047W IPL1P38991 367 aa15.51■□□□□ 0.07
MSF1YPR047W IML1P47170 1584 aa15.51■□□□□ 0.07
MSF1YPR047W NUP188P52593 1655 aaKnown RBP15.51■□□□□ 0.07
MSF1YPR047W HAP1P0CE41 1502 aa15.51■□□□□ 0.07
MSF1YPR047W VMR1P38735 1592 aa15.43■□□□□ 0.06
MSF1YPR047W TYS1P36421 394 aaKnown RBP15.42■□□□□ 0.06
MSF1YPR047W TY1B-NL2Q99337 1749 aaKnown RBP15.42■□□□□ 0.06
MSF1YPR047W YMR196WQ04336 1088 aa15.38■□□□□ 0.05
MSF1YPR047W THI12P42883 340 aa15.35■□□□□ 0.05
MSF1YPR047W THI5P43534 340 aa15.35■□□□□ 0.05
MSF1YPR047W THI11P47183 340 aa15.35■□□□□ 0.05
MSF1YPR047W THI13Q07748 340 aa15.35■□□□□ 0.05
MSF1YPR047W PDR5P33302 1511 aaKnown RBP15.31■□□□□ 0.04
MSF1YPR047W IKI3Q06706 1349 aaKnown RBP15.25■□□□□ 0.03
MSF1YPR047W SSM4P40318 1319 aa15.13■□□□□ 0.01
MSF1YPR047W PDR11P40550 1411 aa15.11■□□□□ 0.01
MSF1YPR047W GCN2P15442 1659 aa15.11■□□□□ 0.01
MSF1YPR047W KRE5P22023 1365 aa15.04■□□□□ -0
MSF1YPR047W CFT1Q06632 1357 aaKnown RBP15.03■□□□□ -0
MSF1YPR047W MRX12P47084 519 aa15□□□□□ -0.01
MSF1YPR047W RIA1P53893 1110 aa15□□□□□ -0.01
MSF1YPR047W YAH1Q12184 172 aaKnown RBP15□□□□□ -0.01
MSF1YPR047W BCK1Q01389 1478 aa14.95□□□□□ -0.02
MSF1YPR047W YNR029CP53729 429 aaKnown RBP14.93□□□□□ -0.02
MSF1YPR047W PTP3P40048 928 aa14.92□□□□□ -0.02
MSF1YPR047W APP1P53933 587 aa14.9□□□□□ -0.02
MSF1YPR047W RAV1P47104 1357 aa14.89□□□□□ -0.03
MSF1YPR047W NUP192P47054 1683 aa14.88□□□□□ -0.03
MSF1YPR047W GLN1P32288 370 aaKnown RBP14.87□□□□□ -0.03
MSF1YPR047W PAF1P38351 445 aa14.86□□□□□ -0.03
MSF1YPR047W YIL055CP40523 627 aaKnown RBP14.83□□□□□ -0.03
MSF1YPR047W CAB1Q04430 367 aa14.83□□□□□ -0.04
MSF1YPR047W RAD9P14737 1309 aa14.8□□□□□ -0.04
MSF1YPR047W ALD4P46367 519 aaKnown RBP14.78□□□□□ -0.04
MSF1YPR047W RTC1Q08281 1341 aa14.77□□□□□ -0.04
MSF1YPR047W BFR2Q06631 534 aaKnown RBP14.77□□□□□ -0.04
MSF1YPR047W TY3B-IQ7LHG5 1498 aaKnown RBP14.75□□□□□ -0.05
MSF1YPR047W REB1P21538 810 aa14.74□□□□□ -0.05
MSF1YPR047W ENT1Q12518 454 aa14.69□□□□□ -0.06
MSF1YPR047W NOP7P53261 605 aaKnown RBP14.66□□□□□ -0.06
MSF1YPR047W ENV9Q08651 330 aa14.64□□□□□ -0.07
MSF1YPR047W YMR074CQ04773 145 aa14.63□□□□□ -0.07
MSF1YPR047W RRP5Q05022 1729 aaKnown RBP14.6□□□□□ -0.07
MSF1YPR047W NAP1P25293 417 aaKnown RBP14.59□□□□□ -0.07
MSF1YPR047W YRF1-2P40105 1681 aa14.59□□□□□ -0.07
MSF1YPR047W IMH1Q06704 911 aaKnown RBP14.58□□□□□ -0.08
MSF1YPR047W PRI1P10363 409 aa14.56□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 120.6 ms