RNA–Protein interactions for RNA: YPL226W

NEW1, Transcript of ATP binding cassette protein, yeast

Gene NEW1, Length 3,591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEW1	YPL226W	TY1B-DR3	Q99231	1755 aa		4.27	□□□□□ -1.73
NEW1	YPL226W	ABP1	P15891	592 aa	Known RBP	4.26	□□□□□ -1.73
NEW1	YPL226W	POL1	P13382	1468 aa		4.25	□□□□□ -1.73
NEW1	YPL226W	SMC4	Q12267	1418 aa		4.24	□□□□□ -1.73
NEW1	YPL226W	YKR023W	P36119	530 aa	Known RBP	4.24	□□□□□ -1.73
NEW1	YPL226W	CDC27	P38042	758 aa		4.24	□□□□□ -1.73
NEW1	YPL226W	NUP159	P40477	1460 aa		4.23	□□□□□ -1.73
NEW1	YPL226W	SPP41	P38904	1435 aa		4.23	□□□□□ -1.73
NEW1	YPL226W	MMS1	Q06211	1407 aa		4.23	□□□□□ -1.73
NEW1	YPL226W	YOR1	P53049	1477 aa		4.23	□□□□□ -1.73
NEW1	YPL226W	DRS2	P39524	1355 aa		4.22	□□□□□ -1.73
NEW1	YPL226W	STU1	P38198	1513 aa		4.22	□□□□□ -1.73
NEW1	YPL226W	YRF1-1	P0CX20	1796 aa		4.22	□□□□□ -1.73
NEW1	YPL226W	YRF1-5	P0CX21	1796 aa		4.22	□□□□□ -1.73
NEW1	YPL226W	YRF1-8	P0CX22	1796 aa		4.22	□□□□□ -1.73
NEW1	YPL226W	VPS15	P22219	1454 aa		4.21	□□□□□ -1.74
NEW1	YPL226W	TSC11	P40061	1430 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	YFR006W	P43590	535 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-JR2	P47100	1755 aa	Known RBP	4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-ER2	Q03619	1755 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-MR1	Q04214	1755 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-NL1	Q12112	1755 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-GR1	Q12141	1755 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	TY1B-BL	Q12490	1755 aa		4.2	□□□□□ -1.74
NEW1	YPL226W	VTH1	P40438	1549 aa		4.19	□□□□□ -1.74
NEW1	YPL226W	VTH2	P40890	1549 aa		4.19	□□□□□ -1.74
NEW1	YPL226W	NTE1	Q04958	1679 aa		4.19	□□□□□ -1.74
NEW1	YPL226W	RPO21	P04050	1733 aa	Known RBP	4.17	□□□□□ -1.74
NEW1	YPL226W	RIM101	P33400	625 aa		4.17	□□□□□ -1.74
NEW1	YPL226W	TFC8	Q12308	588 aa		4.17	□□□□□ -1.74
NEW1	YPL226W	MYO4	P32492	1471 aa		4.17	□□□□□ -1.74
NEW1	YPL226W	UBP10	P53874	792 aa	Predicted RBP	4.16	□□□□□ -1.74
NEW1	YPL226W	SNT2	P53127	1403 aa		4.15	□□□□□ -1.74
NEW1	YPL226W	HO	P09932	586 aa		4.15	□□□□□ -1.74
NEW1	YPL226W	MET10	P39692	1035 aa		4.15	□□□□□ -1.74
NEW1	YPL226W	IRC20	Q06554	1556 aa		4.15	□□□□□ -1.75
NEW1	YPL226W	YTA7	P40340	1379 aa		4.14	□□□□□ -1.75
NEW1	YPL226W	STH1	P32597	1359 aa		4.14	□□□□□ -1.75
NEW1	YPL226W	NUP170	P38181	1502 aa		4.14	□□□□□ -1.75
NEW1	YPL226W	DNF2	Q12675	1612 aa		4.13	□□□□□ -1.75
NEW1	YPL226W	SNQ2	P32568	1501 aa	Known RBP	4.13	□□□□□ -1.75
NEW1	YPL226W	RTT106	P40161	455 aa		4.13	□□□□□ -1.75
NEW1	YPL226W	DCD1	P06773	312 aa		4.12	□□□□□ -1.75
NEW1	YPL226W	MAP2	P38174	421 aa	Known RBP	4.12	□□□□□ -1.75
NEW1	YPL226W	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
NEW1	YPL226W	SPO14	P36126	1683 aa		4.1	□□□□□ -1.75
NEW1	YPL226W	TFA1	P36100	482 aa		4.09	□□□□□ -1.76
NEW1	YPL226W	PDR12	Q02785	1511 aa		4.08	□□□□□ -1.76
NEW1	YPL226W	TRM3	Q07527	1436 aa		4.07	□□□□□ -1.76
NEW1	YPL226W	IQG1	Q12280	1495 aa		4.07	□□□□□ -1.76
NEW1	YPL226W	NUP157	P40064	1391 aa	Known RBP	4.06	□□□□□ -1.76
NEW1	YPL226W	PDR10	P51533	1564 aa		4.06	□□□□□ -1.76
NEW1	YPL226W	DOP1	Q03921	1698 aa		4.06	□□□□□ -1.76
NEW1	YPL226W	MLP2	P40457	1679 aa		4.05	□□□□□ -1.76
NEW1	YPL226W	GDB1	Q06625	1536 aa		4.05	□□□□□ -1.76
NEW1	YPL226W	BUD3	P25558	1636 aa		4.05	□□□□□ -1.76
NEW1	YPL226W	YOR093C	Q12275	1648 aa		4.05	□□□□□ -1.76
NEW1	YPL226W	SCY1	P53009	804 aa		4.04	□□□□□ -1.76
NEW1	YPL226W	TAF7	Q05021	590 aa		4.03	□□□□□ -1.76
NEW1	YPL226W	BCH2	P36122	765 aa		4.02	□□□□□ -1.77
NEW1	YPL226W	SAS10	Q12136	610 aa	Predicted RBP	4.02	□□□□□ -1.77
NEW1	YPL226W	SLX5	P32828	619 aa	Known RBP	4.01	□□□□□ -1.77
NEW1	YPL226W	OXP1	P28273	1286 aa		4.01	□□□□□ -1.77
NEW1	YPL226W	TIF4632	P39936	914 aa	Known RBP	4.01	□□□□□ -1.77
NEW1	YPL226W	PDR15	Q04182	1529 aa	Known RBP	4	□□□□□ -1.77
NEW1	YPL226W	YIL055C	P40523	627 aa	Known RBP	4	□□□□□ -1.77
NEW1	YPL226W	IFH1	P39520	1085 aa		3.99	□□□□□ -1.77
NEW1	YPL226W	PTP3	P40048	928 aa		3.99	□□□□□ -1.77
NEW1	YPL226W	ARO1	P08566	1588 aa	Known RBP	3.99	□□□□□ -1.77
NEW1	YPL226W	CHC1	P22137	1653 aa	Known RBP	3.98	□□□□□ -1.77
NEW1	YPL226W	YAP3	P38749	330 aa		3.97	□□□□□ -1.77
NEW1	YPL226W	SEC7	P11075	2009 aa	Known RBP	3.97	□□□□□ -1.77
NEW1	YPL226W	TGL3	P40308	642 aa		3.97	□□□□□ -1.77
NEW1	YPL226W	CAT8	P39113	1433 aa		3.96	□□□□□ -1.77
NEW1	YPL226W	DNF3	Q12674	1656 aa		3.96	□□□□□ -1.78
NEW1	YPL226W	CKB1	P43639	278 aa		3.95	□□□□□ -1.78
NEW1	YPL226W	URN1	Q06525	465 aa	Known RBP	3.95	□□□□□ -1.78
NEW1	YPL226W	BNR1	P40450	1375 aa		3.94	□□□□□ -1.78
NEW1	YPL226W	EPS1	P40557	701 aa		3.94	□□□□□ -1.78
NEW1	YPL226W	MAK10	Q02197	733 aa		3.94	□□□□□ -1.78
NEW1	YPL226W	GEA1	P47102	1408 aa	Predicted RBP	3.93	□□□□□ -1.78
NEW1	YPL226W	YSP2	Q06681	1438 aa		3.93	□□□□□ -1.78
NEW1	YPL226W	RSM7	P47150	247 aa		3.93	□□□□□ -1.78
NEW1	YPL226W	TY3B-G	Q99315	1547 aa		3.92	□□□□□ -1.78
NEW1	YPL226W	BUD31	P25337	157 aa	Predicted RBP	3.92	□□□□□ -1.78
NEW1	YPL226W	YAH1	Q12184	172 aa	Known RBP	3.92	□□□□□ -1.78
NEW1	YPL226W	BDF1	P35817	686 aa		3.91	□□□□□ -1.78
NEW1	YPL226W	BBC1	P47068	1157 aa		3.91	□□□□□ -1.78
NEW1	YPL226W	YBT1	P32386	1661 aa		3.91	□□□□□ -1.78
NEW1	YPL226W	AI2	P03876	854 aa		3.88	□□□□□ -1.79
NEW1	YPL226W	YMR196W	Q04336	1088 aa		3.87	□□□□□ -1.79
NEW1	YPL226W	USO1	P25386	1790 aa		3.87	□□□□□ -1.79
NEW1	YPL226W	IPL1	P38991	367 aa		3.87	□□□□□ -1.79
NEW1	YPL226W	UBP9	P39967	754 aa		3.86	□□□□□ -1.79
NEW1	YPL226W	SRB8	P25648	1427 aa		3.86	□□□□□ -1.79
NEW1	YPL226W	BUD21	Q08492	214 aa	Predicted RBP	3.85	□□□□□ -1.79
NEW1	YPL226W	THI12	P42883	340 aa		3.84	□□□□□ -1.79
NEW1	YPL226W	THI5	P43534	340 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms