RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	YEL023C	P39992	682 aa		9.64	□□□□□ -0.87
RSA1	YPL193W	PTC4	P38089	393 aa		9.6	□□□□□ -0.87
RSA1	YPL193W	RAM2	P29703	316 aa		9.59	□□□□□ -0.87
RSA1	YPL193W	YDL129W	Q07555	291 aa		9.59	□□□□□ -0.87
RSA1	YPL193W	GRE2	Q12068	342 aa	Known RBP	9.59	□□□□□ -0.87
RSA1	YPL193W	MAK11	P20484	414 aa	Known RBP	9.56	□□□□□ -0.88
RSA1	YPL193W	EDS1	P38073	919 aa		9.53	□□□□□ -0.88
RSA1	YPL193W	ATH1	P48016	1211 aa		9.52	□□□□□ -0.89
RSA1	YPL193W	PTC3	P34221	468 aa	Known RBP	9.51	□□□□□ -0.89
RSA1	YPL193W	CHL1	P22516	861 aa	Predicted RBP	9.48	□□□□□ -0.89
RSA1	YPL193W	PML39	Q03760	334 aa		9.48	□□□□□ -0.89
RSA1	YPL193W	PRE3	P38624	215 aa		9.47	□□□□□ -0.89
RSA1	YPL193W	COQ8	P27697	501 aa		9.46	□□□□□ -0.9
RSA1	YPL193W	GUT1	P32190	709 aa		9.46	□□□□□ -0.9
RSA1	YPL193W	BCK2	P33306	851 aa		9.43	□□□□□ -0.9
RSA1	YPL193W	YDR344C	Q05510	147 aa		9.42	□□□□□ -0.9
RSA1	YPL193W	ELP4	Q02884	456 aa	Known RBP	9.37	□□□□□ -0.91
RSA1	YPL193W	MID1	P41821	548 aa		9.36	□□□□□ -0.91
RSA1	YPL193W	SOL3	P38858	249 aa		9.34	□□□□□ -0.91
RSA1	YPL193W	NST1	P53935	1240 aa		9.33	□□□□□ -0.92
RSA1	YPL193W	VRP1	P37370	817 aa		9.3	□□□□□ -0.92
RSA1	YPL193W	PEX29	Q03370	554 aa		9.28	□□□□□ -0.92
RSA1	YPL193W	MPH3	P0CE00	602 aa		9.27	□□□□□ -0.93
RSA1	YPL193W	AI4	P03878	556 aa		9.25	□□□□□ -0.93
RSA1	YPL193W	ILV3	P39522	585 aa	Known RBP	9.25	□□□□□ -0.93
RSA1	YPL193W	ARH1	P48360	493 aa		9.25	□□□□□ -0.93
RSA1	YPL193W	YGR273C	P53329	174 aa		9.21	□□□□□ -0.94
RSA1	YPL193W	XDJ1	P39102	459 aa		9.19	□□□□□ -0.94
RSA1	YPL193W	NOP53	Q12080	455 aa	Known RBP	9.18	□□□□□ -0.94
RSA1	YPL193W	SPT23	P35210	1082 aa		9.15	□□□□□ -0.94
RSA1	YPL193W	HAP5	Q02516	242 aa		9.14	□□□□□ -0.95
RSA1	YPL193W	MPC54	Q08550	464 aa		9.12	□□□□□ -0.95
RSA1	YPL193W	SLI15	P38283	698 aa		9.09	□□□□□ -0.95
RSA1	YPL193W	DPS1	P04802	557 aa	Known RBP	9.06	□□□□□ -0.96
RSA1	YPL193W	SET1	P38827	1080 aa	Known RBP	9.06	□□□□□ -0.96
RSA1	YPL193W	PTC2	P39966	464 aa	Known RBP	9.06	□□□□□ -0.96
RSA1	YPL193W	NMA111	P53920	997 aa		9.06	□□□□□ -0.96
RSA1	YPL193W	BNI4	P53858	892 aa		9.05	□□□□□ -0.96
RSA1	YPL193W	KEX1	P09620	729 aa		9.03	□□□□□ -0.96
RSA1	YPL193W	DPL1	Q05567	589 aa		9.02	□□□□□ -0.97
RSA1	YPL193W	YML082W	Q04533	649 aa	Known RBP	8.99	□□□□□ -0.97
RSA1	YPL193W	VHR2	P40041	505 aa		8.98	□□□□□ -0.97
RSA1	YPL193W	CDC73	Q06697	393 aa		8.95	□□□□□ -0.98
RSA1	YPL193W	YLR326W	Q06170	240 aa	Known RBP	8.94	□□□□□ -0.98
RSA1	YPL193W	UBP14	P38237	781 aa	Known RBP	8.92	□□□□□ -0.98
RSA1	YPL193W	ISU2	Q12056	156 aa		8.91	□□□□□ -0.98
RSA1	YPL193W	YPR015C	Q12531	247 aa		8.9	□□□□□ -0.98
RSA1	YPL193W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	8.88	□□□□□ -0.99	not detected
RSA1	YPL193W	RAD54	P32863	898 aa		8.87	□□□□□ -0.99
RSA1	YPL193W	RAM1	P22007	431 aa		8.85	□□□□□ -0.99
RSA1	YPL193W	PDR1	P12383	1068 aa		8.84	□□□□□ -0.99
RSA1	YPL193W	GYP1	Q08484	637 aa		8.82	□□□□□ -1
RSA1	YPL193W	RAS1	P01119	309 aa		8.79	□□□□□ -1
RSA1	YPL193W	SRC1	Q03707	834 aa		8.79	□□□□□ -1
RSA1	YPL193W	RPP1B	P10622	106 aa	Known RBP	8.77	□□□□□ -1.01
RSA1	YPL193W	KIC1	P38692	1080 aa		8.77	□□□□□ -1.01
RSA1	YPL193W	YDR090C	Q03193	310 aa		8.76	□□□□□ -1.01
RSA1	YPL193W	RGA2	Q06407	1009 aa		8.76	□□□□□ -1.01
RSA1	YPL193W	IFH1	P39520	1085 aa		8.74	□□□□□ -1.01
RSA1	YPL193W	PEX21	P50091	288 aa		8.71	□□□□□ -1.02
RSA1	YPL193W	YRR1	Q12172	810 aa		8.71	□□□□□ -1.02
RSA1	YPL193W	REF2	P42073	533 aa	Predicted RBP	8.68	□□□□□ -1.02
RSA1	YPL193W	AMS1	P22855	1083 aa		8.66	□□□□□ -1.02
RSA1	YPL193W	VPS70	P47161	811 aa		8.66	□□□□□ -1.02
RSA1	YPL193W	SAS4	Q04003	481 aa		8.65	□□□□□ -1.02
RSA1	YPL193W	YPR148C	Q06523	435 aa		8.65	□□□□□ -1.02
RSA1	YPL193W	SDH2	P21801	266 aa		8.64	□□□□□ -1.03
RSA1	YPL193W	TUM1	Q08686	304 aa	Known RBP	8.64	□□□□□ -1.03
RSA1	YPL193W	BUD20	Q08004	166 aa	Predicted RBP	8.63	□□□□□ -1.03
RSA1	YPL193W	CSC1	Q06538	782 aa		8.6	□□□□□ -1.03
RSA1	YPL193W	PRT1	P06103	763 aa	Known RBP	8.59	□□□□□ -1.03
RSA1	YPL193W	GAP1	P19145	602 aa	Predicted RBP	8.59	□□□□□ -1.03
RSA1	YPL193W	STR2	P47164	639 aa		8.59	□□□□□ -1.03
RSA1	YPL193W	ISM1	P48526	1002 aa		8.59	□□□□□ -1.03
RSA1	YPL193W	TFB4	Q12004	338 aa		8.59	□□□□□ -1.03
RSA1	YPL193W	NUD1	P32336	851 aa		8.58	□□□□□ -1.04
RSA1	YPL193W	YEL077C	Q3E7X8	1277 aa		8.57	□□□□□ -1.04
RSA1	YPL193W	ORC6	P38826	435 aa		8.56	□□□□□ -1.04
RSA1	YPL193W	TRK1	P12685	1235 aa		8.55	□□□□□ -1.04
RSA1	YPL193W	MRF1	P30775	413 aa	Predicted RBP	8.55	□□□□□ -1.04
RSA1	YPL193W	NPL4	P33755	580 aa		8.54	□□□□□ -1.04
RSA1	YPL193W	COX6	P00427	148 aa		8.53	□□□□□ -1.04
RSA1	YPL193W	GCD11	P32481	527 aa	Known RBP	8.51	□□□□□ -1.05
RSA1	YPL193W	ERG12	P07277	443 aa		8.5	□□□□□ -1.05
RSA1	YPL193W	MVP1	P40959	511 aa	Known RBP	8.49	□□□□□ -1.05
RSA1	YPL193W	MAK21	Q12176	1025 aa	Known RBP	8.49	□□□□□ -1.05
RSA1	YPL193W	YPR109W	Q06104	294 aa		8.47	□□□□□ -1.05
RSA1	YPL193W	TY1A-DR4	O74302	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-H	P0C2I4	478 aa	Known RBP	8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-A	P0CX57	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-PR1	P0CX58	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-OR	P0CX59	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-PR2	P0CX60	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-DR5	P0CX65	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-ER2	P0CX66	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-GR3	P0CX67	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-LR1	P0CX68	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-MR2	P0CX69	440 aa		8.45	□□□□□ -1.06
RSA1	YPL193W	SPT16	P32558	1035 aa	Known RBP	8.45	□□□□□ -1.06
RSA1	YPL193W	TY1A-JR2	P47099	440 aa		8.45	□□□□□ -1.06

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms