RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL1, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL1YPL056C ATG2P53855 1592 aa3.91□□□□□ -1.78
LCL1YPL056C NOP2P40991 618 aaKnown RBP3.9□□□□□ -1.79
LCL1YPL056C TRK1P12685 1235 aa3.88□□□□□ -1.79
LCL1YPL056C BPT1P14772 1559 aa3.87□□□□□ -1.79
LCL1YPL056C SSK2P53599 1579 aa3.85□□□□□ -1.79
LCL1YPL056C JIP4Q03361 876 aa3.84□□□□□ -1.79
LCL1YPL056C SIN3P22579 1536 aa3.84□□□□□ -1.8
LCL1YPL056C ELP4Q02884 456 aaKnown RBP3.82□□□□□ -1.8
LCL1YPL056C YCF1P39109 1515 aaKnown RBP3.81□□□□□ -1.8
LCL1YPL056C EBP2P36049 427 aaKnown RBP3.8□□□□□ -1.8
LCL1YPL056C SKI3P17883 1432 aaKnown RBP3.79□□□□□ -1.8
LCL1YPL056C SSN2P38931 1420 aa3.79□□□□□ -1.8
LCL1YPL056C URN1Q06525 465 aaKnown RBP3.79□□□□□ -1.8
LCL1YPL056C ESP1Q03018 1630 aa3.77□□□□□ -1.81
LCL1YPL056C CAB3P36076 571 aa3.77□□□□□ -1.81
LCL1YPL056C TAF2P23255 1407 aa3.77□□□□□ -1.81
LCL1YPL056C GAR1P28007 205 aaKnown RBP3.74□□□□□ -1.81
LCL1YPL056C MTC5Q03897 1148 aa3.74□□□□□ -1.81
LCL1YPL056C UFD4P33202 1483 aa3.73□□□□□ -1.81
LCL1YPL056C SCC2Q04002 1493 aa3.73□□□□□ -1.81
LCL1YPL056C SIS2P36024 562 aa3.72□□□□□ -1.81
LCL1YPL056C YPK9Q12697 1472 aa3.72□□□□□ -1.81
LCL1YPL056C CDC25P04821 1589 aa3.72□□□□□ -1.81
LCL1YPL056C MYO2P19524 1574 aaKnown RBP3.72□□□□□ -1.81
LCL1YPL056C ESC1Q03661 1658 aaKnown RBP3.71□□□□□ -1.81
LCL1YPL056C TY2B-LR1P0C2J3 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-FP0CX63 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-GR2P0CX64 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-CP25384 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-DR2Q03494 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY1B-DR1Q03855 1755 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-DR3Q07791 1770 aaKnown RBP3.71□□□□□ -1.82
LCL1YPL056C TY2B-OR1Q12113 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-DR1Q12472 1770 aa3.71□□□□□ -1.82
LCL1YPL056C TY2B-OR2Q12501 1770 aa3.71□□□□□ -1.82
LCL1YPL056C RPO31P04051 1460 aa3.7□□□□□ -1.82
LCL1YPL056C DNF1P32660 1571 aa3.7□□□□□ -1.82
LCL1YPL056C TY1B-BRQ12193 1756 aa3.7□□□□□ -1.82
LCL1YPL056C TY1B-GR3Q12316 1755 aa3.7□□□□□ -1.82
LCL1YPL056C TY1B-ORQ92393 1755 aa3.7□□□□□ -1.82
LCL1YPL056C MET5P47169 1442 aa3.7□□□□□ -1.82
LCL1YPL056C CHD1P32657 1468 aa3.69□□□□□ -1.82
LCL1YPL056C GBP2P25555 427 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
LCL1YPL056C RIM101P33400 625 aa3.69□□□□□ -1.82
LCL1YPL056C RKR1Q04781 1562 aa3.68□□□□□ -1.82
LCL1YPL056C SAM3Q08986 587 aa3.67□□□□□ -1.82
LCL1YPL056C RPA190P10964 1664 aaKnown RBP3.67□□□□□ -1.82
LCL1YPL056C ARH1P48360 493 aa3.66□□□□□ -1.82
LCL1YPL056C LTE1P07866 1435 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-HO13535 1793 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-DR5P0C2I2 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-DR6P0C2I3 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-LR2P0C2I5 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-LR3P0C2I6 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY1B-PR1P0C2I9 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY1B-PR2P0C2J0 1756 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-PR3P0C2J1 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY1B-JR1P47098 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-ML2Q03434 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY1B-ER1Q03612 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-ML1Q04711 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY1B-GR2Q12269 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-OLQ12273 1755 aa3.66□□□□□ -1.82
LCL1YPL056C TY1B-PLQ12414 1755 aaKnown RBP3.66□□□□□ -1.82
LCL1YPL056C TY2B-BQ12491 1770 aa3.66□□□□□ -1.82
LCL1YPL056C BNI1P41832 1953 aa3.65□□□□□ -1.82
LCL1YPL056C PTC4P38089 393 aa3.65□□□□□ -1.83
LCL1YPL056C TY1B-DR3Q99231 1755 aa3.65□□□□□ -1.83
LCL1YPL056C PAN1P32521 1480 aa3.65□□□□□ -1.83
LCL1YPL056C MIF2P35201 549 aa3.64□□□□□ -1.83
LCL1YPL056C DRS1P32892 752 aaKnown RBP3.63□□□□□ -1.83
LCL1YPL056C YPR148CQ06523 435 aa3.63□□□□□ -1.83
LCL1YPL056C GEA2P39993 1459 aaKnown RBP3.62□□□□□ -1.83
LCL1YPL056C BBC1P47068 1157 aa3.62□□□□□ -1.83
LCL1YPL056C TAF7Q05021 590 aa3.62□□□□□ -1.83
LCL1YPL056C TOP2P06786 1428 aaKnown RBP3.61□□□□□ -1.83
LCL1YPL056C SPT23P35210 1082 aa3.61□□□□□ -1.83
LCL1YPL056C MMS22Q06164 1454 aa3.6□□□□□ -1.83
LCL1YPL056C YRF1-1P0CX20 1796 aa3.59□□□□□ -1.83
LCL1YPL056C YRF1-5P0CX21 1796 aa3.59□□□□□ -1.83
LCL1YPL056C YRF1-8P0CX22 1796 aa3.59□□□□□ -1.83
LCL1YPL056C YEL023CP39992 682 aa3.59□□□□□ -1.83
LCL1YPL056C PML39Q03760 334 aa3.59□□□□□ -1.83
LCL1YPL056C IRC20Q06554 1556 aa3.59□□□□□ -1.84
LCL1YPL056C NTE1Q04958 1679 aa3.59□□□□□ -1.84
LCL1YPL056C VMA1P17255 1071 aaKnown RBP3.58□□□□□ -1.84
LCL1YPL056C TRM732Q03496 1420 aa3.58□□□□□ -1.84
LCL1YPL056C TY1B-JR2P47100 1755 aaKnown RBP3.58□□□□□ -1.84
LCL1YPL056C TY1B-ER2Q03619 1755 aa3.58□□□□□ -1.84
LCL1YPL056C TY1B-MR1Q04214 1755 aa3.58□□□□□ -1.84
LCL1YPL056C TY1B-MR2Q04670 1755 aaKnown RBP3.58□□□□□ -1.84
LCL1YPL056C TY1B-LR1Q12088 1755 aaKnown RBP3.58□□□□□ -1.84
LCL1YPL056C TY1B-NL1Q12112 1755 aa3.58□□□□□ -1.84
LCL1YPL056C TY1B-GR1Q12141 1755 aa3.58□□□□□ -1.84
LCL1YPL056C TY1B-BLQ12490 1755 aa3.58□□□□□ -1.84
LCL1YPL056C POL1P13382 1468 aa3.57□□□□□ -1.84
LCL1YPL056C RPO21P04050 1733 aaKnown RBP3.56□□□□□ -1.84
LCL1YPL056C VPS15P22219 1454 aa3.56□□□□□ -1.84
LCL1YPL056C NUP159P40477 1460 aa3.56□□□□□ -1.84
LCL1YPL056C YFR016CP43597 1233 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms