RNA–Protein interactions for RNA: YPL029W

SUV3, Transcript of ATP-dependent RNA helicase, yeastyeast

Gene SUV3, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUV3YPL029W ULS1Q08562 1619 aa12.63□□□□□ -0.39
SUV3YPL029W IFH1P39520 1085 aa12.6□□□□□ -0.39
SUV3YPL029W DNF1P32660 1571 aa12.6□□□□□ -0.39
SUV3YPL029W RPA190P10964 1664 aaKnown RBP12.58□□□□□ -0.4
SUV3YPL029W GEA1P47102 1408 aaPredicted RBP12.54□□□□□ -0.4
SUV3YPL029W SNT2P53127 1403 aa12.52□□□□□ -0.41
SUV3YPL029W IKI3Q06706 1349 aaKnown RBP12.51□□□□□ -0.41
SUV3YPL029W NTE1Q04958 1679 aa12.49□□□□□ -0.41
SUV3YPL029W RPO21P04050 1733 aaKnown RBP12.47□□□□□ -0.41
SUV3YPL029W TY3B-GQ99315 1547 aa12.45□□□□□ -0.42
SUV3YPL029W RTT106P40161 455 aa12.41□□□□□ -0.42
SUV3YPL029W NUP170P38181 1502 aa12.4□□□□□ -0.42
SUV3YPL029W SSM4P40318 1319 aa12.39□□□□□ -0.43
SUV3YPL029W YBT1P32386 1661 aa12.38□□□□□ -0.43
SUV3YPL029W GEA2P39993 1459 aaKnown RBP12.37□□□□□ -0.43
SUV3YPL029W NUP159P40477 1460 aa12.37□□□□□ -0.43
SUV3YPL029W IRC20Q06554 1556 aa12.35□□□□□ -0.43
SUV3YPL029W YRF1-1P0CX20 1796 aa12.35□□□□□ -0.43
SUV3YPL029W YRF1-5P0CX21 1796 aa12.35□□□□□ -0.43
SUV3YPL029W YRF1-8P0CX22 1796 aa12.35□□□□□ -0.43
SUV3YPL029W VPS15P22219 1454 aa12.32□□□□□ -0.44
SUV3YPL029W BFR2Q06631 534 aaKnown RBP12.31□□□□□ -0.44
SUV3YPL029W SPO14P36126 1683 aa12.27□□□□□ -0.45
SUV3YPL029W MET5P47169 1442 aa12.25□□□□□ -0.45
SUV3YPL029W CAT8P39113 1433 aa12.24□□□□□ -0.45
SUV3YPL029W GDB1Q06625 1536 aa12.24□□□□□ -0.45
SUV3YPL029W MET10P39692 1035 aa12.23□□□□□ -0.45
SUV3YPL029W PDR10P51533 1564 aa12.21□□□□□ -0.45
SUV3YPL029W PDR12Q02785 1511 aa12.21□□□□□ -0.46
SUV3YPL029W ARO1P08566 1588 aaKnown RBP12.18□□□□□ -0.46
SUV3YPL029W NUP157P40064 1391 aaKnown RBP12.17□□□□□ -0.46
SUV3YPL029W CKB1P43639 278 aa12.17□□□□□ -0.46
SUV3YPL029W BUD3P25558 1636 aa12.16□□□□□ -0.46
SUV3YPL029W SRB8P25648 1427 aa12.12□□□□□ -0.47
SUV3YPL029W YSP2Q06681 1438 aa12.04□□□□□ -0.48
SUV3YPL029W SEC7P11075 2009 aaKnown RBP12.01□□□□□ -0.49
SUV3YPL029W IQG1Q12280 1495 aa12.01□□□□□ -0.49
SUV3YPL029W BUD21Q08492 214 aaPredicted RBP11.98□□□□□ -0.49
SUV3YPL029W GCN2P15442 1659 aa11.96□□□□□ -0.49
SUV3YPL029W LTE1P07866 1435 aa11.95□□□□□ -0.5
SUV3YPL029W MMS1Q06211 1407 aa11.93□□□□□ -0.5
SUV3YPL029W BNR1P40450 1375 aa11.9□□□□□ -0.5
SUV3YPL029W DOP1Q03921 1698 aa11.86□□□□□ -0.51
SUV3YPL029W DRS2P39524 1355 aa11.84□□□□□ -0.51
SUV3YPL029W BNI1P41832 1953 aa11.83□□□□□ -0.52
SUV3YPL029W CHC1P22137 1653 aaKnown RBP11.83□□□□□ -0.52
SUV3YPL029W YOR093CQ12275 1648 aa11.81□□□□□ -0.52
SUV3YPL029W ITT1Q04638 464 aa11.8□□□□□ -0.52
SUV3YPL029W NOP7P53261 605 aaKnown RBP11.78□□□□□ -0.52
SUV3YPL029W TRM3Q07527 1436 aa11.77□□□□□ -0.52
SUV3YPL029W POL5P39985 1022 aaKnown RBP11.76□□□□□ -0.53
SUV3YPL029W PDR5P33302 1511 aaKnown RBP11.75□□□□□ -0.53
SUV3YPL029W VMR1P38735 1592 aa11.74□□□□□ -0.53
SUV3YPL029W PAF1P38351 445 aa11.71□□□□□ -0.53
SUV3YPL029W PDR11P40550 1411 aa11.71□□□□□ -0.53
SUV3YPL029W NUP188P52593 1655 aaKnown RBP11.69□□□□□ -0.54
SUV3YPL029W DNF2Q12675 1612 aa11.64□□□□□ -0.55
SUV3YPL029W IML1P47170 1584 aa11.64□□□□□ -0.55
SUV3YPL029W ORC1P54784 914 aaPredicted RBP11.64□□□□□ -0.55
SUV3YPL029W RAV1P47104 1357 aa11.63□□□□□ -0.55
SUV3YPL029W RTC1Q08281 1341 aa11.59□□□□□ -0.55
SUV3YPL029W TYS1P36421 394 aaKnown RBP11.58□□□□□ -0.56
SUV3YPL029W NSR1P27476 414 aaKnown RBP RIP-Chip data11.56□□□□□ -0.56not detected
SUV3YPL029W NUP192P47054 1683 aa11.55□□□□□ -0.56
SUV3YPL029W TAF5P38129 798 aa11.55□□□□□ -0.56
SUV3YPL029W IPL1P38991 367 aa11.55□□□□□ -0.56
SUV3YPL029W SPT7P35177 1332 aa11.51□□□□□ -0.57
SUV3YPL029W TY3B-IQ7LHG5 1498 aaKnown RBP11.5□□□□□ -0.57
SUV3YPL029W URN1Q06525 465 aaKnown RBP11.48□□□□□ -0.57
SUV3YPL029W YAP3P38749 330 aa11.48□□□□□ -0.57
SUV3YPL029W ESL2P36168 1195 aa11.46□□□□□ -0.57
SUV3YPL029W KIP3P53086 805 aaKnown RBP11.46□□□□□ -0.57
SUV3YPL029W SEC3P33332 1336 aaKnown RBP11.44□□□□□ -0.58
SUV3YPL029W MHP1P43638 1398 aa11.44□□□□□ -0.58
SUV3YPL029W YLR419WQ06698 1435 aaKnown RBP11.42□□□□□ -0.58
SUV3YPL029W LEU3P08638 886 aa11.41□□□□□ -0.58
SUV3YPL029W PSD2P53037 1138 aaKnown RBP11.4□□□□□ -0.58
SUV3YPL029W RAD9P14737 1309 aa11.4□□□□□ -0.58
SUV3YPL029W ENP1P38333 483 aaKnown RBP11.4□□□□□ -0.58
SUV3YPL029W DNF3Q12674 1656 aa11.37□□□□□ -0.59
SUV3YPL029W ALD4P46367 519 aaKnown RBP11.36□□□□□ -0.59
SUV3YPL029W SPE2P21182 396 aa11.36□□□□□ -0.59
SUV3YPL029W TAF8Q03750 510 aa11.35□□□□□ -0.59
SUV3YPL029W PDS5Q04264 1277 aa11.35□□□□□ -0.59
SUV3YPL029W CAB1Q04430 367 aa11.35□□□□□ -0.59
SUV3YPL029W AVT3P36062 692 aa11.34□□□□□ -0.59
SUV3YPL029W BCK1Q01389 1478 aa11.34□□□□□ -0.59
SUV3YPL029W MLP1Q02455 1875 aaKnown RBP11.32□□□□□ -0.6
SUV3YPL029W NST1P53935 1240 aa11.31□□□□□ -0.6
SUV3YPL029W ABP1P15891 592 aaKnown RBP11.29□□□□□ -0.6
SUV3YPL029W HAP1P0CE41 1502 aa11.29□□□□□ -0.6
SUV3YPL029W KRE5P22023 1365 aa11.28□□□□□ -0.6
SUV3YPL029W CHZ1P40019 153 aaPredicted RBP11.26□□□□□ -0.61
SUV3YPL029W RTG3P38165 486 aa11.23□□□□□ -0.61
SUV3YPL029W MRX12P47084 519 aa11.23□□□□□ -0.61
SUV3YPL029W MAK10Q02197 733 aa11.23□□□□□ -0.61
SUV3YPL029W RIA1P53893 1110 aa11.21□□□□□ -0.61
SUV3YPL029W USO1P25386 1790 aa11.2□□□□□ -0.62
SUV3YPL029W NAP1P25293 417 aaKnown RBP11.19□□□□□ -0.62
SUV3YPL029W PRS1P32895 427 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 93.2 ms