RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W SNQ2P32568 1501 aaKnown RBP6.61□□□□□ -1.35
SWI1YPL016W SNT2P53127 1403 aa6.59□□□□□ -1.35
SWI1YPL016W YOR093CQ12275 1648 aa6.58□□□□□ -1.36
SWI1YPL016W DNF3Q12674 1656 aa6.54□□□□□ -1.36
SWI1YPL016W BUD4P47136 1447 aa6.5□□□□□ -1.37
SWI1YPL016W SNF2P22082 1703 aa6.5□□□□□ -1.37
SWI1YPL016W SMC4Q12267 1418 aa6.5□□□□□ -1.37
SWI1YPL016W VMR1P38735 1592 aa6.5□□□□□ -1.37
SWI1YPL016W TRM732Q03496 1420 aa6.48□□□□□ -1.37
SWI1YPL016W MDS3P53094 1487 aa6.48□□□□□ -1.37
SWI1YPL016W ARO1P08566 1588 aaKnown RBP6.47□□□□□ -1.37
SWI1YPL016W DNF1P32660 1571 aa6.45□□□□□ -1.38
SWI1YPL016W USO1P25386 1790 aa6.44□□□□□ -1.38
SWI1YPL016W BUD3P25558 1636 aa6.44□□□□□ -1.38
SWI1YPL016W GDB1Q06625 1536 aa6.43□□□□□ -1.38
SWI1YPL016W BNI1P41832 1953 aa6.43□□□□□ -1.38
SWI1YPL016W HAP1P0CE41 1502 aa6.41□□□□□ -1.38
SWI1YPL016W PDR15Q04182 1529 aaKnown RBP6.41□□□□□ -1.38
SWI1YPL016W TOP2P06786 1428 aaKnown RBP6.4□□□□□ -1.39
SWI1YPL016W IQG1Q12280 1495 aa6.39□□□□□ -1.39
SWI1YPL016W NUP188P52593 1655 aaKnown RBP6.35□□□□□ -1.39
SWI1YPL016W YRF1-2P40105 1681 aa6.35□□□□□ -1.39
SWI1YPL016W VTH1P40438 1549 aa6.33□□□□□ -1.4
SWI1YPL016W VTH2P40890 1549 aa6.33□□□□□ -1.4
SWI1YPL016W DUR1,2P32528 1835 aaKnown RBP6.33□□□□□ -1.4
SWI1YPL016W IML1P47170 1584 aa6.32□□□□□ -1.4
SWI1YPL016W DNF2Q12675 1612 aa6.32□□□□□ -1.4
SWI1YPL016W APC1P53886 1748 aa6.31□□□□□ -1.4
SWI1YPL016W RRP5Q05022 1729 aaKnown RBP6.31□□□□□ -1.4
SWI1YPL016W TY4B-HP0C2J7 1802 aa6.31□□□□□ -1.4
SWI1YPL016W TY3B-IQ7LHG5 1498 aaKnown RBP6.3□□□□□ -1.4
SWI1YPL016W NUP159P40477 1460 aa6.28□□□□□ -1.4
SWI1YPL016W RSE1Q04693 1361 aaKnown RBP6.26□□□□□ -1.41
SWI1YPL016W TAF2P23255 1407 aa6.25□□□□□ -1.41
SWI1YPL016W VPS15P22219 1454 aa6.24□□□□□ -1.41
SWI1YPL016W YLR419WQ06698 1435 aaKnown RBP6.21□□□□□ -1.41
SWI1YPL016W MET5P47169 1442 aa6.17□□□□□ -1.42
SWI1YPL016W UTP10P42945 1769 aaKnown RBP6.17□□□□□ -1.42
SWI1YPL016W TY4B-JP47024 1803 aa6.16□□□□□ -1.42
SWI1YPL016W SEC7P11075 2009 aaKnown RBP6.15□□□□□ -1.42
SWI1YPL016W BFR2Q06631 534 aaKnown RBP6.13□□□□□ -1.43
SWI1YPL016W URB1P34241 1764 aaKnown RBP6.13□□□□□ -1.43
SWI1YPL016W GEA2P39993 1459 aaKnown RBP6.08□□□□□ -1.44
SWI1YPL016W SPP41P38904 1435 aa6.08□□□□□ -1.44
SWI1YPL016W MLP1Q02455 1875 aaKnown RBP6.06□□□□□ -1.44
SWI1YPL016W PAN1P32521 1480 aa6.01□□□□□ -1.45
SWI1YPL016W TRM3Q07527 1436 aa5.94□□□□□ -1.46
SWI1YPL016W STH1P32597 1359 aa5.92□□□□□ -1.46
SWI1YPL016W FAS2P19097 1887 aaKnown RBP5.91□□□□□ -1.46
SWI1YPL016W FKS3Q04952 1785 aa5.9□□□□□ -1.46
SWI1YPL016W YRF1-3P0CX14 1859 aa5.9□□□□□ -1.46
SWI1YPL016W YRF1-7P0CX15 1859 aa5.9□□□□□ -1.46
SWI1YPL016W YRF1-6P53819 1859 aa5.9□□□□□ -1.46
SWI1YPL016W YTA7P40340 1379 aa5.9□□□□□ -1.47
SWI1YPL016W TSC11P40061 1430 aa5.89□□□□□ -1.47
SWI1YPL016W SRB8P25648 1427 aa5.88□□□□□ -1.47
SWI1YPL016W CAT8P39113 1433 aa5.86□□□□□ -1.47
SWI1YPL016W SSM4P40318 1319 aa5.84□□□□□ -1.47
SWI1YPL016W IKI3Q06706 1349 aaKnown RBP5.84□□□□□ -1.48
SWI1YPL016W PDR11P40550 1411 aa5.83□□□□□ -1.48
SWI1YPL016W YSP2Q06681 1438 aa5.83□□□□□ -1.48
SWI1YPL016W GEA1P47102 1408 aaPredicted RBP5.82□□□□□ -1.48
SWI1YPL016W RIM15P43565 1770 aa5.8□□□□□ -1.48
SWI1YPL016W NSR1P27476 414 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SWI1YPL016W RQC2Q12532 1038 aaKnown RBP5.74□□□□□ -1.49
SWI1YPL016W HKR1P41809 1802 aa5.66□□□□□ -1.5
SWI1YPL016W BCK1Q01389 1478 aa5.66□□□□□ -1.5
SWI1YPL016W URN1Q06525 465 aaKnown RBP5.63□□□□□ -1.51
SWI1YPL016W NOP2P40991 618 aaKnown RBP5.62□□□□□ -1.51
SWI1YPL016W FIG2P25653 1609 aa5.59□□□□□ -1.51
SWI1YPL016W MMS1Q06211 1407 aa5.58□□□□□ -1.52
SWI1YPL016W LTE1P07866 1435 aa5.57□□□□□ -1.52
SWI1YPL016W AVT3P36062 692 aa5.57□□□□□ -1.52
SWI1YPL016W YPR148CQ06523 435 aa5.55□□□□□ -1.52
SWI1YPL016W YML133CQ03099 1374 aa5.52□□□□□ -1.53
SWI1YPL016W YLL067CQ07888 1374 aa5.52□□□□□ -1.53
SWI1YPL016W YLL066CQ99208 1374 aa5.52□□□□□ -1.53
SWI1YPL016W EBP2P36049 427 aaKnown RBP5.51□□□□□ -1.53
SWI1YPL016W IOC4Q04213 475 aa5.51□□□□□ -1.53
SWI1YPL016W SIS2P36024 562 aa5.44□□□□□ -1.54
SWI1YPL016W DRS1P32892 752 aaKnown RBP5.42□□□□□ -1.54
SWI1YPL016W NUP157P40064 1391 aaKnown RBP5.42□□□□□ -1.54
SWI1YPL016W GSC2P40989 1895 aa5.39□□□□□ -1.55
SWI1YPL016W TRA1P38811 3744 aa5.38□□□□□ -1.55
SWI1YPL016W RAV1P47104 1357 aa5.33□□□□□ -1.56
SWI1YPL016W FAP1P53971 965 aa5.32□□□□□ -1.56
SWI1YPL016W CAB3P36076 571 aa5.3□□□□□ -1.56
SWI1YPL016W YFR016CP43597 1233 aaKnown RBP5.28□□□□□ -1.56
SWI1YPL016W FKS1P38631 1876 aaKnown RBP5.26□□□□□ -1.57
SWI1YPL016W YRF1-4O13559 1382 aa5.26□□□□□ -1.57
SWI1YPL016W NUP145P49687 1317 aa5.24□□□□□ -1.57
SWI1YPL016W MYO1P08964 1928 aa5.24□□□□□ -1.57
SWI1YPL016W PMD1P32634 1753 aa5.23□□□□□ -1.57
SWI1YPL016W PRS1P32895 427 aaKnown RBP5.21□□□□□ -1.57
SWI1YPL016W CWC22P53333 577 aaKnown RBP5.21□□□□□ -1.58
SWI1YPL016W TOM1Q03280 3268 aa5.19□□□□□ -1.58
SWI1YPL016W TAF7Q05021 590 aa5.17□□□□□ -1.58
SWI1YPL016W FLO1P32768 1537 aa5.17□□□□□ -1.58
SWI1YPL016W CFT1Q06632 1357 aaKnown RBP5.17□□□□□ -1.58
SWI1YPL016W YIR014WP40570 242 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms