RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	DCW1	P36091	449 aa		7.92	□□□□□ -1.14
CAF20	YOR276W	MIF2	P35201	549 aa		7.9	□□□□□ -1.14
CAF20	YOR276W	GRE2	Q12068	342 aa	Known RBP	7.9	□□□□□ -1.14
CAF20	YOR276W	TFG1	P41895	735 aa	Predicted RBP	7.89	□□□□□ -1.15
CAF20	YOR276W	EDS1	P38073	919 aa		7.88	□□□□□ -1.15
CAF20	YOR276W	PTC4	P38089	393 aa		7.88	□□□□□ -1.15
CAF20	YOR276W	YEL023C	P39992	682 aa		7.88	□□□□□ -1.15
CAF20	YOR276W	PTC3	P34221	468 aa	Known RBP	7.86	□□□□□ -1.15
CAF20	YOR276W	COQ8	P27697	501 aa		7.85	□□□□□ -1.15
CAF20	YOR276W	GUT1	P32190	709 aa		7.83	□□□□□ -1.16
CAF20	YOR276W	ATH1	P48016	1211 aa		7.83	□□□□□ -1.16
CAF20	YOR276W	YDL129W	Q07555	291 aa		7.83	□□□□□ -1.16
CAF20	YOR276W	SAP30	P38429	201 aa		7.81	□□□□□ -1.16
CAF20	YOR276W	NST1	P53935	1240 aa		7.77	□□□□□ -1.17
CAF20	YOR276W	NOP53	Q12080	455 aa	Known RBP	7.77	□□□□□ -1.17
CAF20	YOR276W	DMA1	P38823	416 aa		7.73	□□□□□ -1.17
CAF20	YOR276W	SOL3	P38858	249 aa		7.73	□□□□□ -1.17
CAF20	YOR276W	CHL1	P22516	861 aa	Predicted RBP	7.72	□□□□□ -1.17
CAF20	YOR276W	PML39	Q03760	334 aa		7.72	□□□□□ -1.17
CAF20	YOR276W	PRE3	P38624	215 aa		7.71	□□□□□ -1.18
CAF20	YOR276W	AI4	P03878	556 aa		7.68	□□□□□ -1.18
CAF20	YOR276W	MPH3	P0CE00	602 aa		7.68	□□□□□ -1.18
CAF20	YOR276W	BCK2	P33306	851 aa		7.64	□□□□□ -1.19
CAF20	YOR276W	YGR273C	P53329	174 aa		7.64	□□□□□ -1.19
CAF20	YOR276W	YDR344C	Q05510	147 aa		7.64	□□□□□ -1.19
CAF20	YOR276W	ILV3	P39522	585 aa	Known RBP	7.63	□□□□□ -1.19
CAF20	YOR276W	MID1	P41821	548 aa		7.63	□□□□□ -1.19
CAF20	YOR276W	RGA1	P39083	1007 aa		7.62	□□□□□ -1.19
CAF20	YOR276W	ARH1	P48360	493 aa		7.6	□□□□□ -1.19
CAF20	YOR276W	SET1	P38827	1080 aa	Known RBP	7.59	□□□□□ -1.19
CAF20	YOR276W	ELP4	Q02884	456 aa	Known RBP	7.59	□□□□□ -1.19
CAF20	YOR276W	PEX29	Q03370	554 aa		7.55	□□□□□ -1.2
CAF20	YOR276W	VRP1	P37370	817 aa		7.52	□□□□□ -1.21
CAF20	YOR276W	MPC54	Q08550	464 aa		7.51	□□□□□ -1.21
CAF20	YOR276W	KEX1	P09620	729 aa		7.5	□□□□□ -1.21
CAF20	YOR276W	SPT23	P35210	1082 aa		7.5	□□□□□ -1.21
CAF20	YOR276W	SLI15	P38283	698 aa		7.5	□□□□□ -1.21
CAF20	YOR276W	HAP5	Q02516	242 aa		7.5	□□□□□ -1.21
CAF20	YOR276W	XDJ1	P39102	459 aa		7.48	□□□□□ -1.21
CAF20	YOR276W	BNI4	P53858	892 aa		7.47	□□□□□ -1.21
CAF20	YOR276W	UBP14	P38237	781 aa	Known RBP	7.45	□□□□□ -1.22
CAF20	YOR276W	DPL1	Q05567	589 aa		7.45	□□□□□ -1.22
CAF20	YOR276W	IFH1	P39520	1085 aa		7.44	□□□□□ -1.22
CAF20	YOR276W	NMA111	P53920	997 aa		7.44	□□□□□ -1.22
CAF20	YOR276W	YLR326W	Q06170	240 aa	Known RBP	7.44	□□□□□ -1.22
CAF20	YOR276W	VHR2	P40041	505 aa		7.41	□□□□□ -1.22
CAF20	YOR276W	YML082W	Q04533	649 aa	Known RBP	7.41	□□□□□ -1.22
CAF20	YOR276W	PTC2	P39966	464 aa	Known RBP	7.4	□□□□□ -1.22
CAF20	YOR276W	YPR148C	Q06523	435 aa		7.39	□□□□□ -1.23
CAF20	YOR276W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.38	□□□□□ -1.23	not detected
CAF20	YOR276W	RAD54	P32863	898 aa		7.37	□□□□□ -1.23
CAF20	YOR276W	CDC73	Q06697	393 aa		7.37	□□□□□ -1.23
CAF20	YOR276W	ISU2	Q12056	156 aa		7.36	□□□□□ -1.23
CAF20	YOR276W	TAF7	Q05021	590 aa		7.34	□□□□□ -1.23
CAF20	YOR276W	YDR090C	Q03193	310 aa		7.33	□□□□□ -1.24
CAF20	YOR276W	DPS1	P04802	557 aa	Known RBP	7.3	□□□□□ -1.24
CAF20	YOR276W	RPP1B	P10622	106 aa	Known RBP	7.3	□□□□□ -1.24
CAF20	YOR276W	RAM1	P22007	431 aa		7.3	□□□□□ -1.24
CAF20	YOR276W	REF2	P42073	533 aa	Predicted RBP	7.3	□□□□□ -1.24
CAF20	YOR276W	YPR015C	Q12531	247 aa		7.3	□□□□□ -1.24
CAF20	YOR276W	KIC1	P38692	1080 aa		7.27	□□□□□ -1.25
CAF20	YOR276W	VPS70	P47161	811 aa		7.26	□□□□□ -1.25
CAF20	YOR276W	PDR1	P12383	1068 aa		7.25	□□□□□ -1.25
CAF20	YOR276W	GAP1	P19145	602 aa	Predicted RBP	7.23	□□□□□ -1.25
CAF20	YOR276W	MAK21	Q12176	1025 aa	Known RBP	7.22	□□□□□ -1.25
CAF20	YOR276W	LEO1	P38439	464 aa		7.2	□□□□□ -1.26
CAF20	YOR276W	CSC1	Q06538	782 aa		7.2	□□□□□ -1.26
CAF20	YOR276W	COX6	P00427	148 aa		7.19	□□□□□ -1.26
CAF20	YOR276W	ORC6	P38826	435 aa		7.19	□□□□□ -1.26
CAF20	YOR276W	SRC1	Q03707	834 aa		7.19	□□□□□ -1.26
CAF20	YOR276W	TFB4	Q12004	338 aa		7.19	□□□□□ -1.26
CAF20	YOR276W	PEX21	P50091	288 aa		7.18	□□□□□ -1.26
CAF20	YOR276W	GYP1	Q08484	637 aa		7.18	□□□□□ -1.26
CAF20	YOR276W	YRR1	Q12172	810 aa		7.17	□□□□□ -1.26
CAF20	YOR276W	SAS4	Q04003	481 aa		7.16	□□□□□ -1.26
CAF20	YOR276W	CKB1	P43639	278 aa		7.14	□□□□□ -1.27
CAF20	YOR276W	TUM1	Q08686	304 aa	Known RBP	7.13	□□□□□ -1.27
CAF20	YOR276W	RAS1	P01119	309 aa		7.12	□□□□□ -1.27
CAF20	YOR276W	STR2	P47164	639 aa		7.12	□□□□□ -1.27
CAF20	YOR276W	BUD20	Q08004	166 aa	Predicted RBP	7.12	□□□□□ -1.27
CAF20	YOR276W	SDH2	P21801	266 aa		7.11	□□□□□ -1.27
CAF20	YOR276W	AMS1	P22855	1083 aa		7.1	□□□□□ -1.27
CAF20	YOR276W	NUD1	P32336	851 aa		7.1	□□□□□ -1.27
CAF20	YOR276W	MVP1	P40959	511 aa	Known RBP	7.1	□□□□□ -1.27
CAF20	YOR276W	SAS10	Q12136	610 aa	Predicted RBP	7.1	□□□□□ -1.27
CAF20	YOR276W	PRT1	P06103	763 aa	Known RBP	7.09	□□□□□ -1.27
CAF20	YOR276W	ISM1	P48526	1002 aa		7.09	□□□□□ -1.27
CAF20	YOR276W	PBS2	P08018	668 aa		7.07	□□□□□ -1.28
CAF20	YOR276W	RGR1	P19263	1082 aa		7.07	□□□□□ -1.28
CAF20	YOR276W	MRF1	P30775	413 aa	Predicted RBP	7.05	□□□□□ -1.28
CAF20	YOR276W	LEU3	P08638	886 aa		7.04	□□□□□ -1.28
CAF20	YOR276W	NPL4	P33755	580 aa		7.04	□□□□□ -1.28
CAF20	YOR276W	YPR109W	Q06104	294 aa		7.03	□□□□□ -1.28
CAF20	YOR276W	YEL077C	Q3E7X8	1277 aa		7.03	□□□□□ -1.28
CAF20	YOR276W	TY1A-DR4	O74302	440 aa		7.01	□□□□□ -1.29
CAF20	YOR276W	TY1A-H	P0C2I4	478 aa	Known RBP	7.01	□□□□□ -1.29
CAF20	YOR276W	TY1A-A	P0CX57	440 aa		7.01	□□□□□ -1.29
CAF20	YOR276W	TY1A-PR1	P0CX58	440 aa		7.01	□□□□□ -1.29
CAF20	YOR276W	TY1A-OR	P0CX59	440 aa		7.01	□□□□□ -1.29
CAF20	YOR276W	TY1A-PR2	P0CX60	440 aa		7.01	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms