RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C JIP4Q03361 876 aa8.45□□□□□ -1.06
VPS21YOR089C DMA1P38823 416 aa8.44□□□□□ -1.06
VPS21YOR089C YEL023CP39992 682 aa8.41□□□□□ -1.06
VPS21YOR089C MIF2P35201 549 aa8.4□□□□□ -1.06
VPS21YOR089C PTC3P34221 468 aaKnown RBP8.38□□□□□ -1.07
VPS21YOR089C PTC4P38089 393 aa8.38□□□□□ -1.07
VPS21YOR089C SAP30P38429 201 aa8.38□□□□□ -1.07
VPS21YOR089C GRE2Q12068 342 aaKnown RBP8.38□□□□□ -1.07
VPS21YOR089C YDL129WQ07555 291 aa8.37□□□□□ -1.07
VPS21YOR089C TFG1P41895 735 aaPredicted RBP8.35□□□□□ -1.07
VPS21YOR089C COQ8P27697 501 aa8.34□□□□□ -1.07
VPS21YOR089C ATH1P48016 1211 aa8.31□□□□□ -1.08
VPS21YOR089C NST1P53935 1240 aa8.31□□□□□ -1.08
VPS21YOR089C GUT1P32190 709 aa8.3□□□□□ -1.08
VPS21YOR089C YDR344CQ05510 147 aa8.3□□□□□ -1.08
VPS21YOR089C SOL3P38858 249 aa8.28□□□□□ -1.08
VPS21YOR089C PRE3P38624 215 aa8.24□□□□□ -1.09
VPS21YOR089C PML39Q03760 334 aa8.24□□□□□ -1.09
VPS21YOR089C CHL1P22516 861 aaPredicted RBP8.23□□□□□ -1.09
VPS21YOR089C ILV3P39522 585 aaKnown RBP8.21□□□□□ -1.1
VPS21YOR089C MID1P41821 548 aa8.18□□□□□ -1.1
VPS21YOR089C MPH3P0CE00 602 aa8.17□□□□□ -1.1
VPS21YOR089C BCK2P33306 851 aa8.17□□□□□ -1.1
VPS21YOR089C TAF7Q05021 590 aa8.17□□□□□ -1.1
VPS21YOR089C AI4P03878 556 aa8.15□□□□□ -1.1
VPS21YOR089C NOP53Q12080 455 aaKnown RBP8.15□□□□□ -1.1
VPS21YOR089C YGR273CP53329 174 aa8.12□□□□□ -1.11
VPS21YOR089C ELP4Q02884 456 aaKnown RBP8.11□□□□□ -1.11
VPS21YOR089C ARH1P48360 493 aa8.1□□□□□ -1.11
VPS21YOR089C PEX29Q03370 554 aa8.05□□□□□ -1.12
VPS21YOR089C VRP1P37370 817 aa8.04□□□□□ -1.12
VPS21YOR089C LEO1P38439 464 aa8.04□□□□□ -1.12
VPS21YOR089C SLI15P38283 698 aa8.01□□□□□ -1.13
VPS21YOR089C MPC54Q08550 464 aa8.01□□□□□ -1.13
VPS21YOR089C SET1P38827 1080 aaKnown RBP8□□□□□ -1.13
VPS21YOR089C XDJ1P39102 459 aa8□□□□□ -1.13
VPS21YOR089C HAP5Q02516 242 aa7.99□□□□□ -1.13
VPS21YOR089C SPT23P35210 1082 aa7.98□□□□□ -1.13
VPS21YOR089C KEX1P09620 729 aa7.96□□□□□ -1.14
VPS21YOR089C BNI4P53858 892 aa7.94□□□□□ -1.14
VPS21YOR089C YLR326WQ06170 240 aaKnown RBP7.93□□□□□ -1.14
VPS21YOR089C UBP14P38237 781 aaKnown RBP7.92□□□□□ -1.14
VPS21YOR089C NMA111P53920 997 aa7.91□□□□□ -1.14
VPS21YOR089C DPL1Q05567 589 aa7.9□□□□□ -1.14
VPS21YOR089C YML082WQ04533 649 aaKnown RBP7.89□□□□□ -1.15
VPS21YOR089C VHR2P40041 505 aa7.88□□□□□ -1.15
VPS21YOR089C PTC2P39966 464 aaKnown RBP7.87□□□□□ -1.15
VPS21YOR089C CDC73Q06697 393 aa7.87□□□□□ -1.15
VPS21YOR089C YPR015CQ12531 247 aa7.86□□□□□ -1.15
VPS21YOR089C PCS60P38137 543 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15 RIP-Chip
VPS21YOR089C RAM1P22007 431 aa7.84□□□□□ -1.15
VPS21YOR089C SAS10Q12136 610 aaPredicted RBP7.84□□□□□ -1.15
VPS21YOR089C DPS1P04802 557 aaKnown RBP7.83□□□□□ -1.16
VPS21YOR089C LEU3P08638 886 aa7.83□□□□□ -1.16
VPS21YOR089C ISU2Q12056 156 aa7.82□□□□□ -1.16
VPS21YOR089C RAD54P32863 898 aa7.8□□□□□ -1.16
VPS21YOR089C YDR090CQ03193 310 aa7.8□□□□□ -1.16
VPS21YOR089C YPR148CQ06523 435 aa7.77□□□□□ -1.17
VPS21YOR089C PDR1P12383 1068 aa7.76□□□□□ -1.17
VPS21YOR089C IFH1P39520 1085 aa7.74□□□□□ -1.17
VPS21YOR089C SRC1Q03707 834 aa7.73□□□□□ -1.17
VPS21YOR089C GAP1P19145 602 aaPredicted RBP7.68□□□□□ -1.18
VPS21YOR089C REF2P42073 533 aaPredicted RBP7.68□□□□□ -1.18
VPS21YOR089C RAS1P01119 309 aa7.67□□□□□ -1.18
VPS21YOR089C SDH2P21801 266 aa7.66□□□□□ -1.18
VPS21YOR089C VPS70P47161 811 aa7.65□□□□□ -1.18
VPS21YOR089C KIC1P38692 1080 aa7.64□□□□□ -1.19
VPS21YOR089C RPP1BP10622 106 aaKnown RBP7.63□□□□□ -1.19
VPS21YOR089C ORC6P38826 435 aa7.62□□□□□ -1.19
VPS21YOR089C GYP1Q08484 637 aa7.62□□□□□ -1.19
VPS21YOR089C YRR1Q12172 810 aa7.62□□□□□ -1.19
VPS21YOR089C RPN1P38764 993 aaKnown RBP7.61□□□□□ -1.19
VPS21YOR089C STR2P47164 639 aa7.59□□□□□ -1.19
VPS21YOR089C BUD20Q08004 166 aaPredicted RBP7.59□□□□□ -1.19
VPS21YOR089C CKB1P43639 278 aa7.58□□□□□ -1.2
VPS21YOR089C CSC1Q06538 782 aa7.58□□□□□ -1.2
VPS21YOR089C TFB4Q12004 338 aa7.58□□□□□ -1.2
VPS21YOR089C COX6P00427 148 aa7.57□□□□□ -1.2
VPS21YOR089C ISM1P48526 1002 aa7.57□□□□□ -1.2
VPS21YOR089C AMS1P22855 1083 aa7.56□□□□□ -1.2
VPS21YOR089C PEX21P50091 288 aa7.56□□□□□ -1.2
VPS21YOR089C SAS4Q04003 481 aa7.56□□□□□ -1.2
VPS21YOR089C TUM1Q08686 304 aaKnown RBP7.56□□□□□ -1.2
VPS21YOR089C SPB4P25808 606 aaPredicted RBP7.54□□□□□ -1.2
VPS21YOR089C NUD1P32336 851 aa7.54□□□□□ -1.2
VPS21YOR089C MAK21Q12176 1025 aaKnown RBP7.54□□□□□ -1.2
VPS21YOR089C MVP1P40959 511 aaKnown RBP7.52□□□□□ -1.21
VPS21YOR089C PRT1P06103 763 aaKnown RBP7.51□□□□□ -1.21
VPS21YOR089C TY1A-DR4O74302 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-HP0C2I4 478 aaKnown RBP7.5□□□□□ -1.21
VPS21YOR089C TY1A-AP0CX57 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-PR1P0CX58 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-ORP0CX59 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-PR2P0CX60 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-DR5P0CX65 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-ER2P0CX66 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-GR3P0CX67 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-LR1P0CX68 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-MR2P0CX69 440 aa7.5□□□□□ -1.21
VPS21YOR089C TY1A-JR2P47099 440 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms