RNA–Protein interactions for RNA: YOL052C

SPE2, Transcript of S-adenosylmethionine decarboxylase, yeastyeast

Gene SPE2, Length 1,191 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE2YOL052C YRF1-8P0CX22 1796 aa13.5□□□□□ -0.25
SPE2YOL052C SNQ2P32568 1501 aaKnown RBP13.49□□□□□ -0.25
SPE2YOL052C NUP159P40477 1460 aa13.49□□□□□ -0.25
SPE2YOL052C LTE1P07866 1435 aa13.47□□□□□ -0.25
SPE2YOL052C SNT2P53127 1403 aa13.47□□□□□ -0.25
SPE2YOL052C STH1P32597 1359 aa13.42□□□□□ -0.26
SPE2YOL052C ULS1Q08562 1619 aa13.38□□□□□ -0.27
SPE2YOL052C MLP2P40457 1679 aa13.37□□□□□ -0.27
SPE2YOL052C VPS15P22219 1454 aa13.37□□□□□ -0.27
SPE2YOL052C GEA2P39993 1459 aaKnown RBP13.34□□□□□ -0.27
SPE2YOL052C BNI1P41832 1953 aa13.32□□□□□ -0.28
SPE2YOL052C PDR15Q04182 1529 aaKnown RBP13.31□□□□□ -0.28
SPE2YOL052C PDR12Q02785 1511 aa13.3□□□□□ -0.28
SPE2YOL052C IRC20Q06554 1556 aa13.28□□□□□ -0.28
SPE2YOL052C SPO14P36126 1683 aa13.24□□□□□ -0.29
SPE2YOL052C TAF7Q05021 590 aa13.23□□□□□ -0.29
SPE2YOL052C MET10P39692 1035 aa13.2□□□□□ -0.3
SPE2YOL052C SAS10Q12136 610 aaPredicted RBP13.19□□□□□ -0.3
SPE2YOL052C GDB1Q06625 1536 aa13.18□□□□□ -0.3
SPE2YOL052C DRS2P39524 1355 aa13.13□□□□□ -0.31
SPE2YOL052C RTT106P40161 455 aa13.13□□□□□ -0.31
SPE2YOL052C ITT1Q04638 464 aa13.13□□□□□ -0.31
SPE2YOL052C NUP170P38181 1502 aa13.13□□□□□ -0.31
SPE2YOL052C TY3B-GQ99315 1547 aa13.11□□□□□ -0.31
SPE2YOL052C GEA1P47102 1408 aaPredicted RBP13.11□□□□□ -0.31
SPE2YOL052C PDR10P51533 1564 aa13.08□□□□□ -0.32
SPE2YOL052C YBT1P32386 1661 aa13.07□□□□□ -0.32
SPE2YOL052C CAT8P39113 1433 aa13.06□□□□□ -0.32
SPE2YOL052C IQG1Q12280 1495 aa13.05□□□□□ -0.32
SPE2YOL052C NUP157P40064 1391 aaKnown RBP13.05□□□□□ -0.32
SPE2YOL052C BUD3P25558 1636 aa13.03□□□□□ -0.32
SPE2YOL052C DOP1Q03921 1698 aa13□□□□□ -0.33
SPE2YOL052C MMS1Q06211 1407 aa13□□□□□ -0.33
SPE2YOL052C TRM3Q07527 1436 aa13□□□□□ -0.33
SPE2YOL052C IFH1P39520 1085 aa12.96□□□□□ -0.33
SPE2YOL052C ARO1P08566 1588 aaKnown RBP12.94□□□□□ -0.34
SPE2YOL052C DNF2Q12675 1612 aa12.93□□□□□ -0.34
SPE2YOL052C CHC1P22137 1653 aaKnown RBP12.88□□□□□ -0.35
SPE2YOL052C YSP2Q06681 1438 aa12.87□□□□□ -0.35
SPE2YOL052C SEC7P11075 2009 aaKnown RBP12.86□□□□□ -0.35
SPE2YOL052C SRB8P25648 1427 aa12.77□□□□□ -0.37
SPE2YOL052C IKI3Q06706 1349 aaKnown RBP12.74□□□□□ -0.37
SPE2YOL052C BNR1P40450 1375 aa12.7□□□□□ -0.38
SPE2YOL052C YOR093CQ12275 1648 aa12.7□□□□□ -0.38
SPE2YOL052C ABP1P15891 592 aaKnown RBP12.69□□□□□ -0.38
SPE2YOL052C CKB1P43639 278 aa12.69□□□□□ -0.38
SPE2YOL052C MIF2P35201 549 aa12.68□□□□□ -0.38
SPE2YOL052C SSM4P40318 1319 aa12.58□□□□□ -0.4
SPE2YOL052C DNF3Q12674 1656 aa12.57□□□□□ -0.4
SPE2YOL052C NUP188P52593 1655 aaKnown RBP12.51□□□□□ -0.41
SPE2YOL052C HAP1P0CE41 1502 aa12.51□□□□□ -0.41
SPE2YOL052C YAP3P38749 330 aa12.5□□□□□ -0.41
SPE2YOL052C BUD21Q08492 214 aaPredicted RBP12.5□□□□□ -0.41
SPE2YOL052C VMR1P38735 1592 aa12.48□□□□□ -0.41
SPE2YOL052C GCN2P15442 1659 aa12.48□□□□□ -0.41
SPE2YOL052C URN1Q06525 465 aaKnown RBP12.44□□□□□ -0.42
SPE2YOL052C PDR5P33302 1511 aaKnown RBP12.43□□□□□ -0.42
SPE2YOL052C IPL1P38991 367 aa12.37□□□□□ -0.43
SPE2YOL052C IML1P47170 1584 aa12.37□□□□□ -0.43
SPE2YOL052C MAK10Q02197 733 aa12.29□□□□□ -0.44
SPE2YOL052C PDR11P40550 1411 aa12.28□□□□□ -0.44
SPE2YOL052C TYS1P36421 394 aaKnown RBP12.27□□□□□ -0.45
SPE2YOL052C YFR006WP43590 535 aa12.26□□□□□ -0.45
SPE2YOL052C TY1B-NL2Q99337 1749 aaKnown RBP12.21□□□□□ -0.45
SPE2YOL052C USO1P25386 1790 aa12.2□□□□□ -0.46
SPE2YOL052C RAV1P47104 1357 aa12.19□□□□□ -0.46
SPE2YOL052C NUP192P47054 1683 aa12.11□□□□□ -0.47
SPE2YOL052C RTC1Q08281 1341 aa12.11□□□□□ -0.47
SPE2YOL052C PAF1P38351 445 aa12.08□□□□□ -0.48
SPE2YOL052C BFR2Q06631 534 aaKnown RBP12.07□□□□□ -0.48
SPE2YOL052C BCK1Q01389 1478 aa12.07□□□□□ -0.48
SPE2YOL052C CFT1Q06632 1357 aaKnown RBP12.05□□□□□ -0.48
SPE2YOL052C YMR196WQ04336 1088 aa12.04□□□□□ -0.48
SPE2YOL052C NOP7P53261 605 aaKnown RBP12□□□□□ -0.49
SPE2YOL052C KRE5P22023 1365 aa11.96□□□□□ -0.49
SPE2YOL052C THI12P42883 340 aa11.94□□□□□ -0.5
SPE2YOL052C THI5P43534 340 aa11.94□□□□□ -0.5
SPE2YOL052C ALD4P46367 519 aaKnown RBP11.94□□□□□ -0.5
SPE2YOL052C THI11P47183 340 aa11.94□□□□□ -0.5
SPE2YOL052C THI13Q07748 340 aa11.94□□□□□ -0.5
SPE2YOL052C RAD9P14737 1309 aa11.92□□□□□ -0.5
SPE2YOL052C MRX12P47084 519 aa11.88□□□□□ -0.51
SPE2YOL052C RIA1P53893 1110 aa11.88□□□□□ -0.51
SPE2YOL052C YNR029CP53729 429 aaKnown RBP11.87□□□□□ -0.51
SPE2YOL052C TY3B-IQ7LHG5 1498 aaKnown RBP11.87□□□□□ -0.51
SPE2YOL052C ESL2P36168 1195 aa11.86□□□□□ -0.51
SPE2YOL052C CAB1Q04430 367 aa11.86□□□□□ -0.51
SPE2YOL052C TAF5P38129 798 aa11.78□□□□□ -0.52
SPE2YOL052C TAF8Q03750 510 aa11.75□□□□□ -0.53
SPE2YOL052C NAP1P25293 417 aaKnown RBP11.74□□□□□ -0.53
SPE2YOL052C PTP3P40048 928 aa11.73□□□□□ -0.53
SPE2YOL052C YLR419WQ06698 1435 aaKnown RBP11.71□□□□□ -0.53
SPE2YOL052C CPS1P27614 576 aa11.68□□□□□ -0.54
SPE2YOL052C SPE2P21182 396 aa11.67□□□□□ -0.54
SPE2YOL052C PSK1P31374 1356 aa11.67□□□□□ -0.54
SPE2YOL052C KIP3P53086 805 aaKnown RBP11.66□□□□□ -0.54
SPE2YOL052C YAH1Q12184 172 aaKnown RBP11.64□□□□□ -0.55
SPE2YOL052C PPH3P32345 308 aa11.62□□□□□ -0.55
SPE2YOL052C RCM1P53972 490 aa11.62□□□□□ -0.55
SPE2YOL052C RRP5Q05022 1729 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms