RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	RKR1	Q04781	1562 aa		3.05	□□□□□ -1.92
SSK2	YNR031C	IQG1	Q12280	1495 aa		3.05	□□□□□ -1.92
SSK2	YNR031C	GCN2	P15442	1659 aa		3.04	□□□□□ -1.92
SSK2	YNR031C	SMC4	Q12267	1418 aa		3.04	□□□□□ -1.92
SSK2	YNR031C	YRF1-2	P40105	1681 aa		3.03	□□□□□ -1.92
SSK2	YNR031C	DOP1	Q03921	1698 aa		3.03	□□□□□ -1.92
SSK2	YNR031C	BUD4	P47136	1447 aa		3.03	□□□□□ -1.92
SSK2	YNR031C	MET5	P47169	1442 aa		3.01	□□□□□ -1.93
SSK2	YNR031C	MMS1	Q06211	1407 aa		3.01	□□□□□ -1.93
SSK2	YNR031C	GEA2	P39993	1459 aa	Known RBP	2.99	□□□□□ -1.93
SSK2	YNR031C	BNI1	P41832	1953 aa		2.99	□□□□□ -1.93
SSK2	YNR031C	SNQ2	P32568	1501 aa	Known RBP	2.98	□□□□□ -1.93
SSK2	YNR031C	SNT2	P53127	1403 aa		2.98	□□□□□ -1.93
SSK2	YNR031C	TY3B-G	Q99315	1547 aa		2.96	□□□□□ -1.94
SSK2	YNR031C	VPS15	P22219	1454 aa		2.95	□□□□□ -1.94
SSK2	YNR031C	GDB1	Q06625	1536 aa		2.95	□□□□□ -1.94
SSK2	YNR031C	YOR093C	Q12275	1648 aa		2.95	□□□□□ -1.94
SSK2	YNR031C	TAF2	P23255	1407 aa		2.94	□□□□□ -1.94
SSK2	YNR031C	ITT1	Q04638	464 aa		2.94	□□□□□ -1.94
SSK2	YNR031C	ARO1	P08566	1588 aa	Known RBP	2.94	□□□□□ -1.94
SSK2	YNR031C	DNF2	Q12675	1612 aa		2.93	□□□□□ -1.94
SSK2	YNR031C	TOP2	P06786	1428 aa	Known RBP	2.93	□□□□□ -1.94
SSK2	YNR031C	RRD1	P40454	393 aa	Known RBP	2.92	□□□□□ -1.94
SSK2	YNR031C	BUD3	P25558	1636 aa		2.92	□□□□□ -1.94
SSK2	YNR031C	DNF3	Q12674	1656 aa		2.89	□□□□□ -1.95
SSK2	YNR031C	MMS22	Q06164	1454 aa		2.88	□□□□□ -1.95
SSK2	YNR031C	NUP188	P52593	1655 aa	Known RBP	2.88	□□□□□ -1.95
SSK2	YNR031C	DRS2	P39524	1355 aa		2.88	□□□□□ -1.95
SSK2	YNR031C	VMR1	P38735	1592 aa		2.88	□□□□□ -1.95
SSK2	YNR031C	PRY3	P47033	881 aa		2.88	□□□□□ -1.95
SSK2	YNR031C	NUP192	P47054	1683 aa		2.87	□□□□□ -1.95
SSK2	YNR031C	UFD4	P33202	1483 aa		2.87	□□□□□ -1.95
SSK2	YNR031C	VTH1	P40438	1549 aa		2.85	□□□□□ -1.95
SSK2	YNR031C	VTH2	P40890	1549 aa		2.85	□□□□□ -1.95
SSK2	YNR031C	RRP5	Q05022	1729 aa	Known RBP	2.85	□□□□□ -1.95
SSK2	YNR031C	TRM3	Q07527	1436 aa		2.84	□□□□□ -1.95
SSK2	YNR031C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.84	□□□□□ -1.96
SSK2	YNR031C	APC1	P53886	1748 aa		2.82	□□□□□ -1.96
SSK2	YNR031C	PRI1	P10363	409 aa		2.82	□□□□□ -1.96
SSK2	YNR031C	PAN1	P32521	1480 aa		2.81	□□□□□ -1.96
SSK2	YNR031C	CAT8	P39113	1433 aa		2.8	□□□□□ -1.96
SSK2	YNR031C	PDR15	Q04182	1529 aa	Known RBP	2.8	□□□□□ -1.96
SSK2	YNR031C	GLN1	P32288	370 aa	Known RBP	2.77	□□□□□ -1.97
SSK2	YNR031C	NUP159	P40477	1460 aa		2.77	□□□□□ -1.97
SSK2	YNR031C	USO1	P25386	1790 aa		2.76	□□□□□ -1.97
SSK2	YNR031C	YIL177C	P40434	1758 aa		2.75	□□□□□ -1.97
SSK2	YNR031C	YJL225C	P40889	1758 aa		2.75	□□□□□ -1.97
SSK2	YNR031C	IML1	P47170	1584 aa		2.75	□□□□□ -1.97
SSK2	YNR031C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.75	□□□□□ -1.97
SSK2	YNR031C	SSA1	P10591	642 aa	Known RBP	2.73	□□□□□ -1.97
SSK2	YNR031C	GEA1	P47102	1408 aa	Predicted RBP	2.73	□□□□□ -1.97
SSK2	YNR031C	SNF2	P22082	1703 aa		2.73	□□□□□ -1.97
SSK2	YNR031C	YTA7	P40340	1379 aa		2.72	□□□□□ -1.97
SSK2	YNR031C	SEC7	P11075	2009 aa	Known RBP	2.69	□□□□□ -1.98
SSK2	YNR031C	UTP10	P42945	1769 aa	Known RBP	2.68	□□□□□ -1.98
SSK2	YNR031C	YKR023W	P36119	530 aa	Known RBP	2.68	□□□□□ -1.98
SSK2	YNR031C	TSC11	P40061	1430 aa		2.67	□□□□□ -1.98
SSK2	YNR031C	TRM732	Q03496	1420 aa		2.66	□□□□□ -1.98
SSK2	YNR031C	SPP41	P38904	1435 aa		2.66	□□□□□ -1.98
SSK2	YNR031C	YCK3	P39962	524 aa		2.65	□□□□□ -1.99
SSK2	YNR031C	YAH1	Q12184	172 aa	Known RBP	2.64	□□□□□ -1.99
SSK2	YNR031C	YSP2	Q06681	1438 aa		2.61	□□□□□ -1.99
SSK2	YNR031C	YIL055C	P40523	627 aa	Known RBP	2.61	□□□□□ -1.99
SSK2	YNR031C	IOC4	Q04213	475 aa		2.61	□□□□□ -1.99
SSK2	YNR031C	URB1	P34241	1764 aa	Known RBP	2.61	□□□□□ -1.99
SSK2	YNR031C	YMR074C	Q04773	145 aa		2.61	□□□□□ -1.99
SSK2	YNR031C	ENV9	Q08651	330 aa		2.6	□□□□□ -1.99
SSK2	YNR031C	SRB8	P25648	1427 aa		2.6	□□□□□ -1.99
SSK2	YNR031C	DRS1	P32892	752 aa	Known RBP	2.59	□□□□□ -2
SSK2	YNR031C	TY4B-H	P0C2J7	1802 aa		2.58	□□□□□ -2
SSK2	YNR031C	TY4B-J	P47024	1803 aa		2.58	□□□□□ -2
SSK2	YNR031C	FKS3	Q04952	1785 aa		2.58	□□□□□ -2
SSK2	YNR031C	BNR1	P40450	1375 aa		2.58	□□□□□ -2
SSK2	YNR031C	RQC2	Q12532	1038 aa	Known RBP	2.58	□□□□□ -2
SSK2	YNR031C	YMR196W	Q04336	1088 aa		2.57	□□□□□ -2
SSK2	YNR031C	RIM15	P43565	1770 aa		2.56	□□□□□ -2
SSK2	YNR031C	MAC1	P35192	417 aa		2.55	□□□□□ -2
SSK2	YNR031C	FIG2	P25653	1609 aa		2.53	□□□□□ -2
SSK2	YNR031C	CFT1	Q06632	1357 aa	Known RBP	2.53	□□□□□ -2
SSK2	YNR031C	MAK10	Q02197	733 aa		2.52	□□□□□ -2.01
SSK2	YNR031C	GTT3	P39996	337 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	BCK1	Q01389	1478 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	EDE1	P34216	1381 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	YRF1-3	P0CX14	1859 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	YRF1-7	P0CX15	1859 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	YRF1-6	P53819	1859 aa		2.51	□□□□□ -2.01
SSK2	YNR031C	SDH2	P21801	266 aa		2.5	□□□□□ -2.01
SSK2	YNR031C	STH1	P32597	1359 aa		2.5	□□□□□ -2.01
SSK2	YNR031C	YLL066C	Q99208	1374 aa		2.5	□□□□□ -2.01
SSK2	YNR031C	BUD31	P25337	157 aa	Predicted RBP	2.5	□□□□□ -2.01
SSK2	YNR031C	UBP1	P25037	809 aa		2.49	□□□□□ -2.01
SSK2	YNR031C	AAD16	Q02895	342 aa		2.49	□□□□□ -2.01
SSK2	YNR031C	HAA1	Q12753	694 aa	Known RBP	2.49	□□□□□ -2.01
SSK2	YNR031C	UGA2	P38067	497 aa		2.49	□□□□□ -2.01
SSK2	YNR031C	DUS1	P53759	423 aa	Known RBP	2.48	□□□□□ -2.01
SSK2	YNR031C	YLR419W	Q06698	1435 aa	Known RBP	2.47	□□□□□ -2.01
SSK2	YNR031C	PEX21	P50091	288 aa		2.47	□□□□□ -2.01
SSK2	YNR031C	YRF1-4	O13559	1382 aa		2.46	□□□□□ -2.02
SSK2	YNR031C	YML133C	Q03099	1374 aa		2.46	□□□□□ -2.02
SSK2	YNR031C	YLL067C	Q07888	1374 aa		2.46	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms