RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W DCW1P36091 449 aa6.93□□□□□ -1.3
SNF12YNR023W DPS1P04802 557 aaKnown RBP6.92□□□□□ -1.3
SNF12YNR023W YEL023CP39992 682 aa6.9□□□□□ -1.3
SNF12YNR023W ELP4Q02884 456 aaKnown RBP6.89□□□□□ -1.31
SNF12YNR023W RGA2Q06407 1009 aa6.85□□□□□ -1.31
SNF12YNR023W TFA1P36100 482 aa6.84□□□□□ -1.31
SNF12YNR023W SSP1P38871 571 aa6.82□□□□□ -1.32
SNF12YNR023W CST9Q06032 482 aa6.81□□□□□ -1.32
SNF12YNR023W PML39Q03760 334 aa6.8□□□□□ -1.32
SNF12YNR023W MGA2P40578 1113 aa6.78□□□□□ -1.32
SNF12YNR023W YDR344CQ05510 147 aa6.76□□□□□ -1.33
SNF12YNR023W RCR1P38212 213 aa6.73□□□□□ -1.33
SNF12YNR023W RGA1P39083 1007 aa6.72□□□□□ -1.33
SNF12YNR023W ARH1P48360 493 aa6.72□□□□□ -1.33
SNF12YNR023W GRE2Q12068 342 aaKnown RBP6.72□□□□□ -1.33
SNF12YNR023W SPT23P35210 1082 aa6.69□□□□□ -1.34
SNF12YNR023W PEX29Q03370 554 aa6.69□□□□□ -1.34
SNF12YNR023W SRC1Q03707 834 aa6.65□□□□□ -1.34
SNF12YNR023W ATH1P48016 1211 aa6.64□□□□□ -1.35
SNF12YNR023W MID1P41821 548 aa6.62□□□□□ -1.35
SNF12YNR023W GUT1P32190 709 aa6.59□□□□□ -1.35
SNF12YNR023W HAP5Q02516 242 aa6.59□□□□□ -1.36
SNF12YNR023W PTC2P39966 464 aaKnown RBP6.58□□□□□ -1.36
SNF12YNR023W MIF2P35201 549 aa6.57□□□□□ -1.36
SNF12YNR023W BNI4P53858 892 aa6.55□□□□□ -1.36
SNF12YNR023W YML082WQ04533 649 aaKnown RBP6.53□□□□□ -1.36
SNF12YNR023W PTC3P34221 468 aaKnown RBP6.51□□□□□ -1.37
SNF12YNR023W AI4P03878 556 aa6.49□□□□□ -1.37
SNF12YNR023W MPH3P0CE00 602 aa6.49□□□□□ -1.37
SNF12YNR023W NST1P53935 1240 aa6.46□□□□□ -1.38
SNF12YNR023W RAS1P01119 309 aa6.45□□□□□ -1.38
SNF12YNR023W MAK11P20484 414 aaKnown RBP6.45□□□□□ -1.38
SNF12YNR023W EDS1P38073 919 aa6.45□□□□□ -1.38
SNF12YNR023W TRK1P12685 1235 aa6.42□□□□□ -1.38
SNF12YNR023W SOL3P38858 249 aa6.42□□□□□ -1.38
SNF12YNR023W MPC54Q08550 464 aa6.42□□□□□ -1.38
SNF12YNR023W NMA111P53920 997 aa6.4□□□□□ -1.38
SNF12YNR023W ILV3P39522 585 aaKnown RBP6.37□□□□□ -1.39
SNF12YNR023W AMS1P22855 1083 aa6.36□□□□□ -1.39
SNF12YNR023W GYP1Q08484 637 aa6.36□□□□□ -1.39
SNF12YNR023W COQ8P27697 501 aa6.35□□□□□ -1.39
SNF12YNR023W DPL1Q05567 589 aa6.33□□□□□ -1.4
SNF12YNR023W YPL062WQ02781 134 aa6.31□□□□□ -1.4
SNF12YNR023W RAM2P29703 316 aa6.3□□□□□ -1.4
SNF12YNR023W YGR273CP53329 174 aa6.3□□□□□ -1.4
SNF12YNR023W SLI15P38283 698 aa6.28□□□□□ -1.4
SNF12YNR023W YPR015CQ12531 247 aa6.28□□□□□ -1.4
SNF12YNR023W ISU2Q12056 156 aa6.26□□□□□ -1.41
SNF12YNR023W YEL077CQ3E7X8 1277 aa6.26□□□□□ -1.41
SNF12YNR023W GBP2P25555 427 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
SNF12YNR023W SAS4Q04003 481 aa6.25□□□□□ -1.41
SNF12YNR023W RAM1P22007 431 aa6.23□□□□□ -1.41
SNF12YNR023W NOP53Q12080 455 aaKnown RBP6.22□□□□□ -1.41
SNF12YNR023W GAR1P28007 205 aaKnown RBP6.18□□□□□ -1.42
SNF12YNR023W MRF1P30775 413 aaPredicted RBP6.18□□□□□ -1.42
SNF12YNR023W GCR2Q01722 534 aa6.16□□□□□ -1.42
SNF12YNR023W BRE2P43132 505 aa6.16□□□□□ -1.42
SNF12YNR023W SDH2P21801 266 aa6.14□□□□□ -1.43
SNF12YNR023W PDR1P12383 1068 aa6.13□□□□□ -1.43
SNF12YNR023W CDC73Q06697 393 aa6.13□□□□□ -1.43
SNF12YNR023W KEX1P09620 729 aa6.11□□□□□ -1.43
SNF12YNR023W RPP1BP10622 106 aaKnown RBP6.1□□□□□ -1.43
SNF12YNR023W ERG12P07277 443 aa6.08□□□□□ -1.44
SNF12YNR023W PRT1P06103 763 aaKnown RBP6.02□□□□□ -1.45
SNF12YNR023W AIR1P40507 360 aaKnown RBP6.01□□□□□ -1.45
SNF12YNR023W PEX21P50091 288 aa5.98□□□□□ -1.45
SNF12YNR023W BUD20Q08004 166 aaPredicted RBP5.98□□□□□ -1.45
SNF12YNR023W RAD54P32863 898 aa5.97□□□□□ -1.45
SNF12YNR023W YLR326WQ06170 240 aaKnown RBP5.96□□□□□ -1.45
SNF12YNR023W VHR2P40041 505 aa5.96□□□□□ -1.46
SNF12YNR023W YRR1Q12172 810 aa5.95□□□□□ -1.46
SNF12YNR023W CST6P40535 587 aa5.94□□□□□ -1.46
SNF12YNR023W CLA4P48562 842 aa5.94□□□□□ -1.46
SNF12YNR023W MET22P32179 357 aa5.93□□□□□ -1.46
SNF12YNR023W NPL4P33755 580 aa5.93□□□□□ -1.46
SNF12YNR023W PCS60P38137 543 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
SNF12YNR023W ENV9Q08651 330 aa5.93□□□□□ -1.46
SNF12YNR023W RQC2Q12532 1038 aaKnown RBP5.93□□□□□ -1.46
SNF12YNR023W CDC4P07834 779 aa5.92□□□□□ -1.46
SNF12YNR023W SPT16P32558 1035 aaKnown RBP5.92□□□□□ -1.46
SNF12YNR023W UBP14P38237 781 aaKnown RBP5.92□□□□□ -1.46
SNF12YNR023W FRK1Q03002 865 aaPredicted RBP5.91□□□□□ -1.46
SNF12YNR023W STR2P47164 639 aa5.9□□□□□ -1.47
SNF12YNR023W LAM6Q08001 693 aa5.9□□□□□ -1.47
SNF12YNR023W ISM1P48526 1002 aa5.89□□□□□ -1.47
SNF12YNR023W KIC1P38692 1080 aa5.88□□□□□ -1.47
SNF12YNR023W YDR444WQ04093 687 aa5.88□□□□□ -1.47
SNF12YNR023W NUD1P32336 851 aa5.87□□□□□ -1.47
SNF12YNR023W GCD11P32481 527 aaKnown RBP5.86□□□□□ -1.47
SNF12YNR023W TFB4Q12004 338 aa5.85□□□□□ -1.47
SNF12YNR023W PAT1P25644 796 aaKnown RBP5.83□□□□□ -1.48
SNF12YNR023W CSC1Q06538 782 aa5.83□□□□□ -1.48
SNF12YNR023W TUM1Q08686 304 aaKnown RBP5.83□□□□□ -1.48
SNF12YNR023W IFH1P39520 1085 aa5.82□□□□□ -1.48
SNF12YNR023W BDP1P46678 594 aa5.81□□□□□ -1.48
SNF12YNR023W HED1Q03937 162 aa5.81□□□□□ -1.48
SNF12YNR023W SET1P38827 1080 aaKnown RBP5.79□□□□□ -1.48
SNF12YNR023W LCB5Q06147 687 aaKnown RBP5.79□□□□□ -1.48
SNF12YNR023W RRN7P40992 514 aa5.78□□□□□ -1.48
SNF12YNR023W MTC5Q03897 1148 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms