RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C YDL129WQ07555 291 aa7.46□□□□□ -1.21
CIT1YNR001C GYP5Q12344 894 aa7.44□□□□□ -1.22
CIT1YNR001C HTA1P04911 132 aaKnown RBP7.42□□□□□ -1.22
CIT1YNR001C HTA2P04912 132 aa7.42□□□□□ -1.22
CIT1YNR001C RAM2P29703 316 aa7.42□□□□□ -1.22
CIT1YNR001C PRE3P38624 215 aa7.42□□□□□ -1.22
CIT1YNR001C PTC4P38089 393 aa7.39□□□□□ -1.23
CIT1YNR001C YEL023CP39992 682 aa7.37□□□□□ -1.23
CIT1YNR001C DCW1P36091 449 aa7.35□□□□□ -1.23
CIT1YNR001C MAK11P20484 414 aaKnown RBP7.33□□□□□ -1.24
CIT1YNR001C EDS1P38073 919 aa7.31□□□□□ -1.24
CIT1YNR001C XDJ1P39102 459 aa7.29□□□□□ -1.24
CIT1YNR001C MIF2P35201 549 aa7.26□□□□□ -1.25
CIT1YNR001C COQ8P27697 501 aa7.24□□□□□ -1.25
CIT1YNR001C PTC3P34221 468 aaKnown RBP7.24□□□□□ -1.25
CIT1YNR001C VRP1P37370 817 aa7.24□□□□□ -1.25
CIT1YNR001C GRE2Q12068 342 aaKnown RBP7.24□□□□□ -1.25
CIT1YNR001C PML39Q03760 334 aa7.22□□□□□ -1.25
CIT1YNR001C ELP4Q02884 456 aaKnown RBP7.19□□□□□ -1.26
CIT1YNR001C YDR344CQ05510 147 aa7.19□□□□□ -1.26
CIT1YNR001C NST1P53935 1240 aa7.18□□□□□ -1.26
CIT1YNR001C GUT1P32190 709 aa7.17□□□□□ -1.26
CIT1YNR001C SOL3P38858 249 aa7.17□□□□□ -1.26
CIT1YNR001C ARH1P48360 493 aa7.17□□□□□ -1.26
CIT1YNR001C ATH1P48016 1211 aa7.15□□□□□ -1.27
CIT1YNR001C DPS1P04802 557 aaKnown RBP7.13□□□□□ -1.27
CIT1YNR001C SPT23P35210 1082 aa7.09□□□□□ -1.28
CIT1YNR001C ILV3P39522 585 aaKnown RBP7.09□□□□□ -1.28
CIT1YNR001C MID1P41821 548 aa7.08□□□□□ -1.28
CIT1YNR001C NOP53Q12080 455 aaKnown RBP7.08□□□□□ -1.28
CIT1YNR001C AI4P03878 556 aa7.06□□□□□ -1.28
CIT1YNR001C MPH3P0CE00 602 aa7.05□□□□□ -1.28
CIT1YNR001C PEX29Q03370 554 aa7.04□□□□□ -1.28
CIT1YNR001C YGR273CP53329 174 aa7.02□□□□□ -1.29
CIT1YNR001C HAP5Q02516 242 aa7.02□□□□□ -1.29
CIT1YNR001C TAF7Q05021 590 aa7.02□□□□□ -1.29
CIT1YNR001C SET1P38827 1080 aaKnown RBP7.01□□□□□ -1.29
CIT1YNR001C BNI4P53858 892 aa7.01□□□□□ -1.29
CIT1YNR001C YML082WQ04533 649 aaKnown RBP7□□□□□ -1.29
CIT1YNR001C SRC1Q03707 834 aa6.99□□□□□ -1.29
CIT1YNR001C PTC2P39966 464 aaKnown RBP6.95□□□□□ -1.3
CIT1YNR001C MPC54Q08550 464 aa6.93□□□□□ -1.3
CIT1YNR001C SLI15P38283 698 aa6.91□□□□□ -1.3
CIT1YNR001C KEX1P09620 729 aa6.9□□□□□ -1.31
CIT1YNR001C UBP14P38237 781 aaKnown RBP6.89□□□□□ -1.31
CIT1YNR001C YLR326WQ06170 240 aaKnown RBP6.89□□□□□ -1.31
CIT1YNR001C VHR2P40041 505 aa6.86□□□□□ -1.31
CIT1YNR001C NMA111P53920 997 aa6.86□□□□□ -1.31
CIT1YNR001C DPL1Q05567 589 aa6.84□□□□□ -1.31
CIT1YNR001C YPR148CQ06523 435 aa6.84□□□□□ -1.31
CIT1YNR001C PCS60P38137 543 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
CIT1YNR001C INO80P53115 1489 aa6.82□□□□□ -1.32
CIT1YNR001C MON2P48563 1636 aaPredicted RBP6.82□□□□□ -1.32
CIT1YNR001C YDR090CQ03193 310 aa6.81□□□□□ -1.32
CIT1YNR001C DMA1P38823 416 aa6.8□□□□□ -1.32
CIT1YNR001C CDC73Q06697 393 aa6.8□□□□□ -1.32
CIT1YNR001C RAS1P01119 309 aa6.79□□□□□ -1.32
CIT1YNR001C YPR015CQ12531 247 aa6.79□□□□□ -1.32
CIT1YNR001C RAM1P22007 431 aa6.78□□□□□ -1.32
CIT1YNR001C IFH1P39520 1085 aa6.77□□□□□ -1.33
CIT1YNR001C ISU2Q12056 156 aa6.77□□□□□ -1.33
CIT1YNR001C RAD54P32863 898 aa6.76□□□□□ -1.33
CIT1YNR001C AMS1P22855 1083 aa6.74□□□□□ -1.33
CIT1YNR001C VPS70P47161 811 aa6.74□□□□□ -1.33
CIT1YNR001C TRK1P12685 1235 aa6.72□□□□□ -1.33
CIT1YNR001C REF2P42073 533 aaPredicted RBP6.72□□□□□ -1.33
CIT1YNR001C GYP1Q08484 637 aa6.71□□□□□ -1.34
CIT1YNR001C SAS4Q04003 481 aa6.7□□□□□ -1.34
CIT1YNR001C PDR1P12383 1068 aa6.69□□□□□ -1.34
CIT1YNR001C GAP1P19145 602 aaPredicted RBP6.68□□□□□ -1.34
CIT1YNR001C SDH2P21801 266 aa6.65□□□□□ -1.35
CIT1YNR001C KIC1P38692 1080 aa6.64□□□□□ -1.35
CIT1YNR001C ORC6P38826 435 aa6.64□□□□□ -1.35
CIT1YNR001C COX6P00427 148 aa6.63□□□□□ -1.35
CIT1YNR001C YEL077CQ3E7X8 1277 aa6.63□□□□□ -1.35
CIT1YNR001C RPP1BP10622 106 aaKnown RBP6.61□□□□□ -1.35
CIT1YNR001C LEO1P38439 464 aa6.59□□□□□ -1.35
CIT1YNR001C SAS10Q12136 610 aaPredicted RBP6.59□□□□□ -1.35
CIT1YNR001C YRR1Q12172 810 aa6.59□□□□□ -1.35
CIT1YNR001C MRF1P30775 413 aaPredicted RBP6.59□□□□□ -1.36
CIT1YNR001C MAK21Q12176 1025 aaKnown RBP6.59□□□□□ -1.36
CIT1YNR001C CSC1Q06538 782 aa6.57□□□□□ -1.36
CIT1YNR001C STR2P47164 639 aa6.56□□□□□ -1.36
CIT1YNR001C TFB4Q12004 338 aa6.56□□□□□ -1.36
CIT1YNR001C PBS2P08018 668 aa6.55□□□□□ -1.36
CIT1YNR001C YPL062WQ02781 134 aa6.55□□□□□ -1.36
CIT1YNR001C BUD20Q08004 166 aaPredicted RBP6.55□□□□□ -1.36
CIT1YNR001C TUM1Q08686 304 aaKnown RBP6.55□□□□□ -1.36
CIT1YNR001C MVP1P40959 511 aaKnown RBP6.54□□□□□ -1.36
CIT1YNR001C CKB1P43639 278 aa6.54□□□□□ -1.36
CIT1YNR001C ISM1P48526 1002 aa6.53□□□□□ -1.36
CIT1YNR001C PEX21P50091 288 aa6.53□□□□□ -1.36
CIT1YNR001C RGR1P19263 1082 aa6.52□□□□□ -1.37
CIT1YNR001C PRT1P06103 763 aaKnown RBP6.51□□□□□ -1.37
CIT1YNR001C NUD1P32336 851 aa6.51□□□□□ -1.37
CIT1YNR001C DNA2P38859 1522 aa6.51□□□□□ -1.37
CIT1YNR001C TY1A-DR4O74302 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-HP0C2I4 478 aaKnown RBP6.5□□□□□ -1.37
CIT1YNR001C TY1A-AP0CX57 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-PR1P0CX58 440 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms