RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W PRP3Q03338 469 aaPredicted RBP8.65□□□□□ -1.02
MSB3YNL293W YSH1Q06224 779 aaPredicted RBP8.65□□□□□ -1.02
MSB3YNL293W TOP2P06786 1428 aaKnown RBP8.65□□□□□ -1.03
MSB3YNL293W NST1P53935 1240 aa8.64□□□□□ -1.03
MSB3YNL293W LTV1P34078 463 aa8.64□□□□□ -1.03
MSB3YNL293W TAN1P53072 289 aaPredicted RBP8.62□□□□□ -1.03
MSB3YNL293W TLG1Q03322 224 aa8.62□□□□□ -1.03
MSB3YNL293W SLN1P39928 1220 aaPredicted RBP8.62□□□□□ -1.03
MSB3YNL293W HIF1Q12373 385 aa8.62□□□□□ -1.03
MSB3YNL293W ECM16Q04217 1267 aaKnown RBP8.61□□□□□ -1.03
MSB3YNL293W CBF5P33322 483 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
MSB3YNL293W DSN1P40568 576 aa8.6□□□□□ -1.03
MSB3YNL293W RPN7Q06103 429 aaKnown RBP8.6□□□□□ -1.03
MSB3YNL293W NOP8Q08287 484 aaPredicted RBP8.59□□□□□ -1.03
MSB3YNL293W NHA1Q99271 985 aa8.59□□□□□ -1.03
MSB3YNL293W MMS1Q06211 1407 aa8.59□□□□□ -1.03
MSB3YNL293W YPP1P46951 817 aa8.58□□□□□ -1.04
MSB3YNL293W SRB8P25648 1427 aa8.58□□□□□ -1.04
MSB3YNL293W MON2P48563 1636 aaPredicted RBP8.57□□□□□ -1.04
MSB3YNL293W TOA1P32773 286 aa8.57□□□□□ -1.04
MSB3YNL293W IKI3Q06706 1349 aaKnown RBP8.57□□□□□ -1.04
MSB3YNL293W CLB5P30283 435 aa8.56□□□□□ -1.04
MSB3YNL293W BUD4P47136 1447 aa8.56□□□□□ -1.04
MSB3YNL293W SSA1P10591 642 aaKnown RBP8.55□□□□□ -1.04
MSB3YNL293W SSA2P10592 639 aaKnown RBP8.55□□□□□ -1.04
MSB3YNL293W TRM732Q03496 1420 aa8.55□□□□□ -1.04
MSB3YNL293W YIR014WP40570 242 aa8.54□□□□□ -1.04
MSB3YNL293W PEP1P32319 1579 aa8.54□□□□□ -1.04
MSB3YNL293W NOT3P06102 836 aaKnown RBP8.54□□□□□ -1.04
MSB3YNL293W SAP190P36123 1033 aa8.54□□□□□ -1.04
MSB3YNL293W BMS1Q08965 1183 aaKnown RBP8.54□□□□□ -1.04
MSB3YNL293W SRP54P20424 541 aaKnown RBP8.53□□□□□ -1.04
MSB3YNL293W PET111P08468 800 aa8.52□□□□□ -1.04
MSB3YNL293W SPT16P32558 1035 aaKnown RBP8.52□□□□□ -1.04
MSB3YNL293W RRP14P36080 434 aaKnown RBP8.52□□□□□ -1.04
MSB3YNL293W MED8P38304 223 aa8.52□□□□□ -1.04
MSB3YNL293W LEU3P08638 886 aa8.52□□□□□ -1.05
MSB3YNL293W CHZ1P40019 153 aaPredicted RBP8.5□□□□□ -1.05
MSB3YNL293W APL5Q08951 932 aaKnown RBP8.5□□□□□ -1.05
MSB3YNL293W PRY3P47033 881 aa8.5□□□□□ -1.05
MSB3YNL293W SUB1P54000 292 aaKnown RBP8.5□□□□□ -1.05
MSB3YNL293W ECM1P39715 212 aa8.49□□□□□ -1.05
MSB3YNL293W DJP1P40564 432 aa8.49□□□□□ -1.05
MSB3YNL293W EDE1P34216 1381 aa8.49□□□□□ -1.05
MSB3YNL293W YLR419WQ06698 1435 aaKnown RBP8.49□□□□□ -1.05
MSB3YNL293W MYO4P32492 1471 aa8.48□□□□□ -1.05
MSB3YNL293W GIN4Q12263 1142 aa8.48□□□□□ -1.05
MSB3YNL293W RRP15Q06511 250 aaPredicted RBP8.48□□□□□ -1.05
MSB3YNL293W RAD51P25454 400 aa8.47□□□□□ -1.05
MSB3YNL293W RSC8P43609 557 aaKnown RBP8.47□□□□□ -1.05
MSB3YNL293W PEA2P40091 420 aa8.46□□□□□ -1.05
MSB3YNL293W PAP2P53632 584 aaKnown RBP8.46□□□□□ -1.06
MSB3YNL293W ABP1P15891 592 aaKnown RBP8.45□□□□□ -1.06
MSB3YNL293W SWI3P32591 825 aa8.44□□□□□ -1.06
MSB3YNL293W ERV41Q04651 352 aa8.44□□□□□ -1.06
MSB3YNL293W YLL054CQ12244 843 aa8.44□□□□□ -1.06
MSB3YNL293W DEP1P31385 405 aa8.44□□□□□ -1.06
MSB3YNL293W RTT106P40161 455 aa8.44□□□□□ -1.06
MSB3YNL293W YVC1Q12324 675 aa8.44□□□□□ -1.06
MSB3YNL293W YPK9Q12697 1472 aa8.43□□□□□ -1.06
MSB3YNL293W TY1B-AO13527 1196 aaKnown RBP8.43□□□□□ -1.06
MSB3YNL293W CDC11P32458 415 aa8.43□□□□□ -1.06
MSB3YNL293W MCM1P11746 286 aa8.42□□□□□ -1.06
MSB3YNL293W ALD3P54114 506 aa8.42□□□□□ -1.06
MSB3YNL293W ORC1P54784 914 aaPredicted RBP8.42□□□□□ -1.06
MSB3YNL293W SUP35P05453 685 aaKnown RBP8.42□□□□□ -1.06
MSB3YNL293W CLB1P24868 471 aa8.42□□□□□ -1.06
MSB3YNL293W VPS72Q03388 795 aa8.42□□□□□ -1.06
MSB3YNL293W MSP1P28737 362 aa8.41□□□□□ -1.06
MSB3YNL293W RPC82P32349 654 aa8.41□□□□□ -1.06
MSB3YNL293W KNS1P32350 737 aaPredicted RBP8.41□□□□□ -1.06
MSB3YNL293W TPM2P40414 161 aa8.41□□□□□ -1.06
MSB3YNL293W MPP10P47083 593 aaKnown RBP8.41□□□□□ -1.06
MSB3YNL293W PCT1P13259 424 aa8.41□□□□□ -1.06
MSB3YNL293W VPS60Q03390 229 aa8.41□□□□□ -1.06
MSB3YNL293W SSM4P40318 1319 aa8.4□□□□□ -1.06
MSB3YNL293W ARL1P38116 183 aaKnown RBP8.4□□□□□ -1.06
MSB3YNL293W CIN4P39110 191 aa8.4□□□□□ -1.06
MSB3YNL293W YMR124WP39523 943 aaKnown RBP8.4□□□□□ -1.06
MSB3YNL293W LEM3P42838 414 aa8.4□□□□□ -1.06
MSB3YNL293W PSD2P53037 1138 aaKnown RBP8.4□□□□□ -1.06
MSB3YNL293W VID30P53076 958 aa8.4□□□□□ -1.06
MSB3YNL293W RSC1P53236 928 aa8.39□□□□□ -1.07
MSB3YNL293W NOP14Q99207 810 aaKnown RBP8.39□□□□□ -1.07
MSB3YNL293W PDR10P51533 1564 aa8.39□□□□□ -1.07
MSB3YNL293W RAD2P07276 1031 aa8.39□□□□□ -1.07
MSB3YNL293W VPS24P36095 224 aaKnown RBP8.39□□□□□ -1.07
MSB3YNL293W SEC9P40357 651 aa8.39□□□□□ -1.07
MSB3YNL293W RNT1Q02555 471 aa8.39□□□□□ -1.07
MSB3YNL293W TCD1P38756 429 aa8.37□□□□□ -1.07
MSB3YNL293W VPS30Q02948 557 aa8.37□□□□□ -1.07
MSB3YNL293W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
MSB3YNL293W HSC82P15108 705 aaKnown RBP8.37□□□□□ -1.07
MSB3YNL293W BDP1P46678 594 aa8.36□□□□□ -1.07
MSB3YNL293W RIM101P33400 625 aa8.35□□□□□ -1.07
MSB3YNL293W AIM20P40451 204 aa8.35□□□□□ -1.07
MSB3YNL293W UBP10P53874 792 aaPredicted RBP8.35□□□□□ -1.07
MSB3YNL293W NFI1Q12216 726 aa8.35□□□□□ -1.07
MSB3YNL293W SMC4Q12267 1418 aa8.35□□□□□ -1.07
MSB3YNL293W MDM38Q08179 573 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms