RNA–Protein interactions for RNA: YNL237W

YTP1, Transcript of Probable type-III integral membrane protein of unknown function, yeastyeast

Gene YTP1, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTP1YNL237W VTH2P40890 1549 aa9.34□□□□□ -0.91
YTP1YNL237W RPA190P10964 1664 aaKnown RBP9.34□□□□□ -0.91
YTP1YNL237W TRM732Q03496 1420 aa9.33□□□□□ -0.92
YTP1YNL237W SAS10Q12136 610 aaPredicted RBP9.32□□□□□ -0.92
YTP1YNL237W NTE1Q04958 1679 aa9.31□□□□□ -0.92
YTP1YNL237W DNF1P32660 1571 aa9.31□□□□□ -0.92
YTP1YNL237W TY3B-GQ99315 1547 aa9.3□□□□□ -0.92
YTP1YNL237W PAN1P32521 1480 aa9.29□□□□□ -0.92
YTP1YNL237W RPO21P04050 1733 aaKnown RBP9.27□□□□□ -0.92
YTP1YNL237W TSC11P40061 1430 aa9.27□□□□□ -0.93
YTP1YNL237W NUP170P38181 1502 aa9.26□□□□□ -0.93
YTP1YNL237W TSR3Q12094 313 aaKnown RBP9.26□□□□□ -0.93
YTP1YNL237W STH1P32597 1359 aa9.26□□□□□ -0.93
YTP1YNL237W YBT1P32386 1661 aa9.25□□□□□ -0.93
YTP1YNL237W SNT2P53127 1403 aa9.22□□□□□ -0.93
YTP1YNL237W GEA1P47102 1408 aaPredicted RBP9.2□□□□□ -0.94
YTP1YNL237W IRC20Q06554 1556 aa9.2□□□□□ -0.94
YTP1YNL237W YRF1-1P0CX20 1796 aa9.17□□□□□ -0.94
YTP1YNL237W YRF1-5P0CX21 1796 aa9.17□□□□□ -0.94
YTP1YNL237W YRF1-8P0CX22 1796 aa9.17□□□□□ -0.94
YTP1YNL237W RQC2Q12532 1038 aaKnown RBP9.16□□□□□ -0.94
YTP1YNL237W SSM4P40318 1319 aa9.11□□□□□ -0.95
YTP1YNL237W IKI3Q06706 1349 aaKnown RBP9.11□□□□□ -0.95
YTP1YNL237W SPO14P36126 1683 aa9.09□□□□□ -0.95
YTP1YNL237W GEA2P39993 1459 aaKnown RBP9.07□□□□□ -0.96
YTP1YNL237W IFH1P39520 1085 aa9.07□□□□□ -0.96
YTP1YNL237W NUP159P40477 1460 aa9.06□□□□□ -0.96
YTP1YNL237W TAF7Q05021 590 aa9.04□□□□□ -0.96
YTP1YNL237W GDB1Q06625 1536 aa9.03□□□□□ -0.96
YTP1YNL237W ARO1P08566 1588 aaKnown RBP9.03□□□□□ -0.96
YTP1YNL237W VPS15P22219 1454 aa9.03□□□□□ -0.96
YTP1YNL237W PDR12Q02785 1511 aa9□□□□□ -0.97
YTP1YNL237W PDR10P51533 1564 aa9□□□□□ -0.97
YTP1YNL237W BUD3P25558 1636 aa8.97□□□□□ -0.97
YTP1YNL237W BFR2Q06631 534 aaKnown RBP8.94□□□□□ -0.98
YTP1YNL237W CAT8P39113 1433 aa8.94□□□□□ -0.98
YTP1YNL237W MRPL32P25348 183 aa8.92□□□□□ -0.98
YTP1YNL237W MET5P47169 1442 aa8.91□□□□□ -0.98
YTP1YNL237W GCN2P15442 1659 aa8.87□□□□□ -0.99
YTP1YNL237W NUP157P40064 1391 aaKnown RBP8.86□□□□□ -0.99
YTP1YNL237W RTT106P40161 455 aa8.86□□□□□ -0.99
YTP1YNL237W DIP2Q12220 943 aaPredicted RBP8.85□□□□□ -0.99
YTP1YNL237W SRB8P25648 1427 aa8.84□□□□□ -0.99
YTP1YNL237W YSP2Q06681 1438 aa8.83□□□□□ -1
YTP1YNL237W CHC1P22137 1653 aaKnown RBP8.8□□□□□ -1
YTP1YNL237W SEC7P11075 2009 aaKnown RBP8.8□□□□□ -1
YTP1YNL237W YOR093CQ12275 1648 aa8.8□□□□□ -1
YTP1YNL237W DOP1Q03921 1698 aa8.79□□□□□ -1
YTP1YNL237W IQG1Q12280 1495 aa8.78□□□□□ -1
YTP1YNL237W MET10P39692 1035 aa8.77□□□□□ -1.01
YTP1YNL237W VMR1P38735 1592 aa8.75□□□□□ -1.01
YTP1YNL237W BNI1P41832 1953 aa8.73□□□□□ -1.01
YTP1YNL237W YGL015CP33199 130 aa8.73□□□□□ -1.01
YTP1YNL237W CKB1P43639 278 aa8.73□□□□□ -1.01
YTP1YNL237W PDR5P33302 1511 aaKnown RBP8.71□□□□□ -1.01
YTP1YNL237W LTE1P07866 1435 aa8.67□□□□□ -1.02
YTP1YNL237W NUP188P52593 1655 aaKnown RBP8.65□□□□□ -1.02
YTP1YNL237W MMS1Q06211 1407 aa8.65□□□□□ -1.02
YTP1YNL237W PDR11P40550 1411 aa8.63□□□□□ -1.03
YTP1YNL237W DNF2Q12675 1612 aa8.62□□□□□ -1.03
YTP1YNL237W BNR1P40450 1375 aa8.62□□□□□ -1.03
YTP1YNL237W TRM3Q07527 1436 aa8.61□□□□□ -1.03
YTP1YNL237W NUP192P47054 1683 aa8.61□□□□□ -1.03
YTP1YNL237W BUD21Q08492 214 aaPredicted RBP8.59□□□□□ -1.03
YTP1YNL237W IML1P47170 1584 aa8.58□□□□□ -1.04
YTP1YNL237W AVT3P36062 692 aa8.57□□□□□ -1.04
YTP1YNL237W REB1P21538 810 aa8.56□□□□□ -1.04
YTP1YNL237W DRS2P39524 1355 aa8.56□□□□□ -1.04
YTP1YNL237W RPL17AP05740 184 aaKnown RBP8.51□□□□□ -1.05
YTP1YNL237W RPL17BP46990 184 aaKnown RBP8.51□□□□□ -1.05
YTP1YNL237W TY3B-IQ7LHG5 1498 aaKnown RBP8.49□□□□□ -1.05
YTP1YNL237W RAV1P47104 1357 aa8.49□□□□□ -1.05
YTP1YNL237W NSR1P27476 414 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
YTP1YNL237W ITT1Q04638 464 aa8.48□□□□□ -1.05
YTP1YNL237W POL5P39985 1022 aaKnown RBP8.48□□□□□ -1.05
YTP1YNL237W TFA1P36100 482 aa8.44□□□□□ -1.06
YTP1YNL237W NOP7P53261 605 aaKnown RBP8.44□□□□□ -1.06
YTP1YNL237W RTC1Q08281 1341 aa8.41□□□□□ -1.06
YTP1YNL237W DNF3Q12674 1656 aa8.41□□□□□ -1.06
YTP1YNL237W SPT7P35177 1332 aa8.41□□□□□ -1.06
YTP1YNL237W YLR419WQ06698 1435 aaKnown RBP8.4□□□□□ -1.07
YTP1YNL237W TYS1P36421 394 aaKnown RBP8.37□□□□□ -1.07
YTP1YNL237W ORC1P54784 914 aaPredicted RBP8.36□□□□□ -1.07
YTP1YNL237W PAF1P38351 445 aa8.35□□□□□ -1.07
YTP1YNL237W MHP1P43638 1398 aa8.35□□□□□ -1.07
YTP1YNL237W MLP1Q02455 1875 aaKnown RBP8.34□□□□□ -1.07
YTP1YNL237W TAF5P38129 798 aa8.33□□□□□ -1.08
YTP1YNL237W BCK1Q01389 1478 aa8.32□□□□□ -1.08
YTP1YNL237W NST1P53935 1240 aa8.31□□□□□ -1.08
YTP1YNL237W CDC27P38042 758 aa8.3□□□□□ -1.08
YTP1YNL237W IPL1P38991 367 aa8.29□□□□□ -1.08
YTP1YNL237W PSD2P53037 1138 aaKnown RBP8.29□□□□□ -1.08
YTP1YNL237W HAP1P0CE41 1502 aa8.29□□□□□ -1.08
YTP1YNL237W USO1P25386 1790 aa8.29□□□□□ -1.08
YTP1YNL237W RAD9P14737 1309 aa8.28□□□□□ -1.08
YTP1YNL237W SEC3P33332 1336 aaKnown RBP8.28□□□□□ -1.08
YTP1YNL237W TY1B-NL2Q99337 1749 aaKnown RBP8.27□□□□□ -1.09
YTP1YNL237W LEU3P08638 886 aa8.26□□□□□ -1.09
YTP1YNL237W ENP1P38333 483 aaKnown RBP8.26□□□□□ -1.09
YTP1YNL237W KIP3P53086 805 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms