RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C EAP1P36041 632 aaKnown RBP6.24□□□□□ -1.41
WHI3YNL197C MIF2P35201 549 aa6.22□□□□□ -1.41
WHI3YNL197C YFR006WP43590 535 aa6.22□□□□□ -1.41
WHI3YNL197C ABP1P15891 592 aaKnown RBP6.21□□□□□ -1.42
WHI3YNL197C YOL036WQ08206 761 aa6.2□□□□□ -1.42
WHI3YNL197C RTG1P32607 177 aa6.2□□□□□ -1.42
WHI3YNL197C SET4P42948 560 aa6.19□□□□□ -1.42
WHI3YNL197C YNR021WP53723 404 aaKnown RBP6.19□□□□□ -1.42
WHI3YNL197C TRP5P00931 707 aaKnown RBP6.18□□□□□ -1.42
WHI3YNL197C PTC3P34221 468 aaKnown RBP6.18□□□□□ -1.42
WHI3YNL197C REF2P42073 533 aaPredicted RBP6.18□□□□□ -1.42
WHI3YNL197C NUP42P49686 430 aaKnown RBP6.17□□□□□ -1.42
WHI3YNL197C NCR1Q12200 1170 aa6.17□□□□□ -1.42
WHI3YNL197C MAM3Q12296 706 aa6.17□□□□□ -1.42
WHI3YNL197C IES2P40154 320 aa6.15□□□□□ -1.42
WHI3YNL197C KIN1P13185 1064 aa6.15□□□□□ -1.43
WHI3YNL197C DIT2P21595 489 aa6.15□□□□□ -1.43
WHI3YNL197C GLC3P32775 704 aa6.14□□□□□ -1.43
WHI3YNL197C SEC61P32915 480 aa6.14□□□□□ -1.43
WHI3YNL197C YNL035CP53962 389 aaKnown RBP6.14□□□□□ -1.43
WHI3YNL197C AIM7Q12156 149 aa6.13□□□□□ -1.43
WHI3YNL197C COX6P00427 148 aa6.13□□□□□ -1.43
WHI3YNL197C VMA1P17255 1071 aaKnown RBP6.11□□□□□ -1.43
WHI3YNL197C MAK21Q12176 1025 aaKnown RBP6.11□□□□□ -1.43
WHI3YNL197C SAM3Q08986 587 aa6.11□□□□□ -1.43
WHI3YNL197C YDR090CQ03193 310 aa6.1□□□□□ -1.43
WHI3YNL197C UBP14P38237 781 aaKnown RBP6.09□□□□□ -1.43
WHI3YNL197C VHR2P40041 505 aa6.06□□□□□ -1.44
WHI3YNL197C TFG1P41895 735 aaPredicted RBP6.06□□□□□ -1.44
WHI3YNL197C YLR326WQ06170 240 aaKnown RBP6.06□□□□□ -1.44
WHI3YNL197C RLF2Q12495 606 aa6.06□□□□□ -1.44
WHI3YNL197C GUA1P38625 525 aaKnown RBP6.04□□□□□ -1.44
WHI3YNL197C GUT1P32190 709 aa6.04□□□□□ -1.44
WHI3YNL197C SOL3P38858 249 aa6.03□□□□□ -1.44
WHI3YNL197C DAN4P47179 1161 aa6.03□□□□□ -1.44
WHI3YNL197C GRE2Q12068 342 aaKnown RBP6.03□□□□□ -1.44
WHI3YNL197C YGR273CP53329 174 aa6.02□□□□□ -1.45
WHI3YNL197C JIP4Q03361 876 aa6.02□□□□□ -1.45
WHI3YNL197C ATH1P48016 1211 aa6.02□□□□□ -1.45
WHI3YNL197C SAP30P38429 201 aa6.01□□□□□ -1.45
WHI3YNL197C NST1P53935 1240 aa6□□□□□ -1.45
WHI3YNL197C BCK2P33306 851 aa5.99□□□□□ -1.45
WHI3YNL197C YDL129WQ07555 291 aa5.99□□□□□ -1.45
WHI3YNL197C GYP5Q12344 894 aa5.99□□□□□ -1.45
WHI3YNL197C PCS60P38137 543 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
WHI3YNL197C ATF2P53296 535 aa5.98□□□□□ -1.45
WHI3YNL197C KEX1P09620 729 aa5.98□□□□□ -1.45
WHI3YNL197C CHL1P22516 861 aaPredicted RBP5.98□□□□□ -1.45
WHI3YNL197C HTA1P04911 132 aaKnown RBP5.97□□□□□ -1.45
WHI3YNL197C HTA2P04912 132 aa5.97□□□□□ -1.45
WHI3YNL197C HPC2Q01448 625 aa5.96□□□□□ -1.46
WHI3YNL197C PSE1P32337 1089 aaKnown RBP5.95□□□□□ -1.46
WHI3YNL197C PRE3P38624 215 aa5.95□□□□□ -1.46
WHI3YNL197C RAD54P32863 898 aa5.94□□□□□ -1.46
WHI3YNL197C DCW1P36091 449 aa5.94□□□□□ -1.46
WHI3YNL197C ORC6P38826 435 aa5.94□□□□□ -1.46
WHI3YNL197C PTC4P38089 393 aa5.93□□□□□ -1.46
WHI3YNL197C ILV3P39522 585 aaKnown RBP5.93□□□□□ -1.46
WHI3YNL197C KIC1P38692 1080 aa5.92□□□□□ -1.46
WHI3YNL197C YEL023CP39992 682 aa5.92□□□□□ -1.46
WHI3YNL197C TFB3Q03290 321 aa5.92□□□□□ -1.46
WHI3YNL197C HGH1P48362 394 aaKnown RBP5.91□□□□□ -1.46
WHI3YNL197C PKC1P24583 1151 aa5.89□□□□□ -1.47
WHI3YNL197C KTR1P27810 393 aaKnown RBP5.89□□□□□ -1.47
WHI3YNL197C AI4P03878 556 aa5.88□□□□□ -1.47
WHI3YNL197C MPH3P0CE00 602 aa5.88□□□□□ -1.47
WHI3YNL197C GAP1P19145 602 aaPredicted RBP5.87□□□□□ -1.47
WHI3YNL197C RGR1P19263 1082 aa5.87□□□□□ -1.47
WHI3YNL197C CSN12P47130 423 aa5.87□□□□□ -1.47
WHI3YNL197C SSA2P10592 639 aaKnown RBP5.86□□□□□ -1.47
WHI3YNL197C MVP1P40959 511 aaKnown RBP5.85□□□□□ -1.47
WHI3YNL197C TEA1P47988 759 aa5.85□□□□□ -1.47
WHI3YNL197C SLI15P38283 698 aa5.84□□□□□ -1.48
WHI3YNL197C BRL1P38770 471 aa5.84□□□□□ -1.48
WHI3YNL197C GLN1P32288 370 aaKnown RBP5.83□□□□□ -1.48
WHI3YNL197C XDJ1P39102 459 aa5.83□□□□□ -1.48
WHI3YNL197C VRP1P37370 817 aa5.82□□□□□ -1.48
WHI3YNL197C YDR344CQ05510 147 aa5.82□□□□□ -1.48
WHI3YNL197C PML39Q03760 334 aa5.82□□□□□ -1.48
WHI3YNL197C NIS1P53939 407 aa5.81□□□□□ -1.48
WHI3YNL197C TYW1Q08960 810 aaKnown RBP5.81□□□□□ -1.48
WHI3YNL197C ELP4Q02884 456 aaKnown RBP5.8□□□□□ -1.48
WHI3YNL197C CLB5P30283 435 aa5.79□□□□□ -1.48
WHI3YNL197C BIM1P40013 344 aa5.79□□□□□ -1.48
WHI3YNL197C ATG32P40458 529 aa5.78□□□□□ -1.48
WHI3YNL197C YJL007CP47080 104 aa5.78□□□□□ -1.48
WHI3YNL197C FPK1P53739 893 aa5.78□□□□□ -1.48
WHI3YNL197C CSC1Q06538 782 aa5.78□□□□□ -1.48
WHI3YNL197C HST2P53686 357 aa5.77□□□□□ -1.49
WHI3YNL197C CDC73Q06697 393 aa5.77□□□□□ -1.49
WHI3YNL197C YPR109WQ06104 294 aa5.75□□□□□ -1.49
WHI3YNL197C SIT4P20604 311 aa5.75□□□□□ -1.49
WHI3YNL197C BIO2P32451 375 aa5.75□□□□□ -1.49
WHI3YNL197C ARH1P48360 493 aa5.75□□□□□ -1.49
WHI3YNL197C SUB2Q07478 446 aaKnown RBP5.75□□□□□ -1.49
WHI3YNL197C SCJ1P25303 377 aa5.74□□□□□ -1.49
WHI3YNL197C TFB4Q12004 338 aa5.74□□□□□ -1.49
WHI3YNL197C TIF1P10081 395 aaKnown RBP5.73□□□□□ -1.49
WHI3YNL197C DPS1P04802 557 aaKnown RBP5.73□□□□□ -1.49
WHI3YNL197C ERG12P07277 443 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms