RNA–Protein interactions for RNA: YNL071W

LAT1, Transcript of Dihydrolipoamide acetyltransferase component (E2) of the PDC, yeast

Gene LAT1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAT1	YNL071W	TY1B-MR2	Q04670	1755 aa	Known RBP	12.04	□□□□□ -0.48
LAT1	YNL071W	TY1B-LR1	Q12088	1755 aa	Known RBP	12.04	□□□□□ -0.48
LAT1	YNL071W	TY1B-NL1	Q12112	1755 aa		12.04	□□□□□ -0.48
LAT1	YNL071W	TY1B-GR1	Q12141	1755 aa		12.04	□□□□□ -0.48
LAT1	YNL071W	TY1B-BL	Q12490	1755 aa		12.04	□□□□□ -0.48
LAT1	YNL071W	YFR006W	P43590	535 aa		12.03	□□□□□ -0.48
LAT1	YNL071W	TSC11	P40061	1430 aa		12	□□□□□ -0.49
LAT1	YNL071W	VTH1	P40438	1549 aa		12	□□□□□ -0.49
LAT1	YNL071W	VTH2	P40890	1549 aa		12	□□□□□ -0.49
LAT1	YNL071W	RPO21	P04050	1733 aa	Known RBP	11.99	□□□□□ -0.49
LAT1	YNL071W	IRC20	Q06554	1556 aa		11.94	□□□□□ -0.5
LAT1	YNL071W	MYO4	P32492	1471 aa		11.91	□□□□□ -0.5
LAT1	YNL071W	DNF2	Q12675	1612 aa		11.89	□□□□□ -0.51
LAT1	YNL071W	NUP170	P38181	1502 aa		11.88	□□□□□ -0.51
LAT1	YNL071W	SNT2	P53127	1403 aa		11.82	□□□□□ -0.52
LAT1	YNL071W	SNQ2	P32568	1501 aa	Known RBP	11.81	□□□□□ -0.52
LAT1	YNL071W	ULS1	Q08562	1619 aa		11.81	□□□□□ -0.52
LAT1	YNL071W	SPO14	P36126	1683 aa		11.8	□□□□□ -0.52
LAT1	YNL071W	MET10	P39692	1035 aa		11.79	□□□□□ -0.52
LAT1	YNL071W	YTA7	P40340	1379 aa		11.77	□□□□□ -0.52
LAT1	YNL071W	STH1	P32597	1359 aa		11.76	□□□□□ -0.53
LAT1	YNL071W	RTT106	P40161	455 aa		11.76	□□□□□ -0.53
LAT1	YNL071W	DOP1	Q03921	1698 aa		11.71	□□□□□ -0.53
LAT1	YNL071W	PDR12	Q02785	1511 aa		11.67	□□□□□ -0.54
LAT1	YNL071W	MLP2	P40457	1679 aa		11.66	□□□□□ -0.54
LAT1	YNL071W	TRM3	Q07527	1436 aa		11.66	□□□□□ -0.54
LAT1	YNL071W	YOR093C	Q12275	1648 aa		11.65	□□□□□ -0.54
LAT1	YNL071W	PDR10	P51533	1564 aa		11.64	□□□□□ -0.55
LAT1	YNL071W	IQG1	Q12280	1495 aa		11.63	□□□□□ -0.55
LAT1	YNL071W	GDB1	Q06625	1536 aa		11.61	□□□□□ -0.55
LAT1	YNL071W	BUD3	P25558	1636 aa		11.58	□□□□□ -0.56
LAT1	YNL071W	NUP157	P40064	1391 aa	Known RBP	11.58	□□□□□ -0.56
LAT1	YNL071W	PDR15	Q04182	1529 aa	Known RBP	11.48	□□□□□ -0.57
LAT1	YNL071W	CHC1	P22137	1653 aa	Known RBP	11.48	□□□□□ -0.57
LAT1	YNL071W	SAS10	Q12136	610 aa	Predicted RBP	11.43	□□□□□ -0.58
LAT1	YNL071W	ARO1	P08566	1588 aa	Known RBP	11.43	□□□□□ -0.58
LAT1	YNL071W	DNF3	Q12674	1656 aa		11.4	□□□□□ -0.58
LAT1	YNL071W	TAF7	Q05021	590 aa		11.4	□□□□□ -0.58
LAT1	YNL071W	IFH1	P39520	1085 aa		11.36	□□□□□ -0.59
LAT1	YNL071W	SEC7	P11075	2009 aa	Known RBP	11.34	□□□□□ -0.59
LAT1	YNL071W	YAP3	P38749	330 aa		11.3	□□□□□ -0.6
LAT1	YNL071W	CAT8	P39113	1433 aa		11.3	□□□□□ -0.6
LAT1	YNL071W	BNR1	P40450	1375 aa		11.24	□□□□□ -0.61
LAT1	YNL071W	CKB1	P43639	278 aa		11.24	□□□□□ -0.61
LAT1	YNL071W	YBT1	P32386	1661 aa		11.24	□□□□□ -0.61
LAT1	YNL071W	TY3B-G	Q99315	1547 aa		11.23	□□□□□ -0.61
LAT1	YNL071W	GEA1	P47102	1408 aa	Predicted RBP	11.22	□□□□□ -0.61
LAT1	YNL071W	MAK10	Q02197	733 aa		11.21	□□□□□ -0.61
LAT1	YNL071W	URN1	Q06525	465 aa	Known RBP	11.2	□□□□□ -0.62
LAT1	YNL071W	YSP2	Q06681	1438 aa		11.18	□□□□□ -0.62
LAT1	YNL071W	USO1	P25386	1790 aa		11.17	□□□□□ -0.62
LAT1	YNL071W	YMR196W	Q04336	1088 aa		11.01	□□□□□ -0.65
LAT1	YNL071W	TY1B-NL2	Q99337	1749 aa	Known RBP	11	□□□□□ -0.65
LAT1	YNL071W	SRB8	P25648	1427 aa		10.99	□□□□□ -0.65
LAT1	YNL071W	IML1	P47170	1584 aa		10.99	□□□□□ -0.65
LAT1	YNL071W	IPL1	P38991	367 aa		10.98	□□□□□ -0.65
LAT1	YNL071W	THI12	P42883	340 aa		10.96	□□□□□ -0.65
LAT1	YNL071W	THI5	P43534	340 aa		10.96	□□□□□ -0.65
LAT1	YNL071W	THI11	P47183	340 aa		10.96	□□□□□ -0.65
LAT1	YNL071W	THI13	Q07748	340 aa		10.96	□□□□□ -0.65
LAT1	YNL071W	HAP1	P0CE41	1502 aa		10.95	□□□□□ -0.66
LAT1	YNL071W	NUP188	P52593	1655 aa	Known RBP	10.95	□□□□□ -0.66
LAT1	YNL071W	BUD21	Q08492	214 aa	Predicted RBP	10.93	□□□□□ -0.66
LAT1	YNL071W	VMR1	P38735	1592 aa		10.9	□□□□□ -0.66
LAT1	YNL071W	TYS1	P36421	394 aa	Known RBP	10.88	□□□□□ -0.67
LAT1	YNL071W	PDR5	P33302	1511 aa	Known RBP	10.76	□□□□□ -0.69
LAT1	YNL071W	YAH1	Q12184	172 aa	Known RBP	10.75	□□□□□ -0.69
LAT1	YNL071W	GLN1	P32288	370 aa	Known RBP	10.71	□□□□□ -0.69
LAT1	YNL071W	YIL055C	P40523	627 aa	Known RBP	10.67	□□□□□ -0.7
LAT1	YNL071W	MRX12	P47084	519 aa		10.67	□□□□□ -0.7
LAT1	YNL071W	APP1	P53933	587 aa		10.66	□□□□□ -0.7
LAT1	YNL071W	KRE5	P22023	1365 aa		10.64	□□□□□ -0.71
LAT1	YNL071W	RIA1	P53893	1110 aa		10.64	□□□□□ -0.71
LAT1	YNL071W	PTP3	P40048	928 aa		10.61	□□□□□ -0.71
LAT1	YNL071W	CFT1	Q06632	1357 aa	Known RBP	10.59	□□□□□ -0.71
LAT1	YNL071W	YNR029C	P53729	429 aa	Known RBP	10.58	□□□□□ -0.72
LAT1	YNL071W	PRI1	P10363	409 aa		10.57	□□□□□ -0.72
LAT1	YNL071W	IKI3	Q06706	1349 aa	Known RBP	10.56	□□□□□ -0.72
LAT1	YNL071W	PDR11	P40550	1411 aa		10.56	□□□□□ -0.72
LAT1	YNL071W	BCK1	Q01389	1478 aa		10.56	□□□□□ -0.72
LAT1	YNL071W	GCN2	P15442	1659 aa		10.56	□□□□□ -0.72
LAT1	YNL071W	REB1	P21538	810 aa		10.52	□□□□□ -0.73
LAT1	YNL071W	YMR074C	Q04773	145 aa		10.5	□□□□□ -0.73
LAT1	YNL071W	ENT1	Q12518	454 aa		10.49	□□□□□ -0.73
LAT1	YNL071W	NUP192	P47054	1683 aa		10.48	□□□□□ -0.73
LAT1	YNL071W	PAF1	P38351	445 aa		10.47	□□□□□ -0.73
LAT1	YNL071W	SSM4	P40318	1319 aa		10.45	□□□□□ -0.74
LAT1	YNL071W	CAB1	Q04430	367 aa		10.45	□□□□□ -0.74
LAT1	YNL071W	ENV9	Q08651	330 aa		10.45	□□□□□ -0.74
LAT1	YNL071W	YRF1-2	P40105	1681 aa		10.43	□□□□□ -0.74
LAT1	YNL071W	IMH1	Q06704	911 aa	Known RBP	10.43	□□□□□ -0.74
LAT1	YNL071W	RAV1	P47104	1357 aa		10.41	□□□□□ -0.74
LAT1	YNL071W	TY3B-I	Q7LHG5	1498 aa	Known RBP	10.41	□□□□□ -0.74
LAT1	YNL071W	RAD9	P14737	1309 aa		10.4	□□□□□ -0.74
LAT1	YNL071W	ALD4	P46367	519 aa	Known RBP	10.39	□□□□□ -0.75
LAT1	YNL071W	RRP5	Q05022	1729 aa	Known RBP	10.37	□□□□□ -0.75
LAT1	YNL071W	BUD31	P25337	157 aa	Predicted RBP	10.36	□□□□□ -0.75
LAT1	YNL071W	BFR2	Q06631	534 aa	Known RBP	10.35	□□□□□ -0.75
LAT1	YNL071W	NAP1	P25293	417 aa	Known RBP	10.34	□□□□□ -0.75
LAT1	YNL071W	RTC1	Q08281	1341 aa		10.33	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms