RNA–Protein interactions for RNA: YNL026W

SAM50, Transcript of Component of the Sorting and Assembly Machinery (SAM) complex, yeastyeast

Gene SAM50, Length 1,455 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM50YNL026W TY1B-JR2P47100 1755 aaKnown RBP13.85□□□□□ -0.19
SAM50YNL026W TY1B-ER2Q03619 1755 aa13.85□□□□□ -0.19
SAM50YNL026W TY1B-MR1Q04214 1755 aa13.85□□□□□ -0.19
SAM50YNL026W TY1B-MR2Q04670 1755 aaKnown RBP13.85□□□□□ -0.19
SAM50YNL026W TY1B-LR1Q12088 1755 aaKnown RBP13.85□□□□□ -0.19
SAM50YNL026W TY1B-NL1Q12112 1755 aa13.85□□□□□ -0.19
SAM50YNL026W TY1B-GR1Q12141 1755 aa13.85□□□□□ -0.19
SAM50YNL026W TY1B-BLQ12490 1755 aa13.85□□□□□ -0.19
SAM50YNL026W NTE1Q04958 1679 aa13.82□□□□□ -0.2
SAM50YNL026W MYO4P32492 1471 aa13.8□□□□□ -0.2
SAM50YNL026W SNT2P53127 1403 aa13.77□□□□□ -0.2
SAM50YNL026W RPO21P04050 1733 aaKnown RBP13.77□□□□□ -0.21
SAM50YNL026W IRC20Q06554 1556 aa13.76□□□□□ -0.21
SAM50YNL026W MET10P39692 1035 aa13.7□□□□□ -0.22
SAM50YNL026W SNQ2P32568 1501 aaKnown RBP13.68□□□□□ -0.22
SAM50YNL026W NUP170P38181 1502 aa13.66□□□□□ -0.22
SAM50YNL026W YTA7P40340 1379 aa13.66□□□□□ -0.22
SAM50YNL026W DNF2Q12675 1612 aa13.65□□□□□ -0.22
SAM50YNL026W STH1P32597 1359 aa13.63□□□□□ -0.23
SAM50YNL026W PDR12Q02785 1511 aa13.54□□□□□ -0.24
SAM50YNL026W RTT106P40161 455 aa13.54□□□□□ -0.24
SAM50YNL026W SPO14P36126 1683 aa13.53□□□□□ -0.24
SAM50YNL026W ULS1Q08562 1619 aa13.53□□□□□ -0.24
SAM50YNL026W IQG1Q12280 1495 aa13.46□□□□□ -0.25
SAM50YNL026W TRM3Q07527 1436 aa13.46□□□□□ -0.26
SAM50YNL026W NUP157P40064 1391 aaKnown RBP13.43□□□□□ -0.26
SAM50YNL026W GDB1Q06625 1536 aa13.42□□□□□ -0.26
SAM50YNL026W PDR10P51533 1564 aa13.41□□□□□ -0.26
SAM50YNL026W DOP1Q03921 1698 aa13.4□□□□□ -0.26
SAM50YNL026W YOR093CQ12275 1648 aa13.37□□□□□ -0.27
SAM50YNL026W MLP2P40457 1679 aa13.33□□□□□ -0.28
SAM50YNL026W BUD3P25558 1636 aa13.32□□□□□ -0.28
SAM50YNL026W PDR15Q04182 1529 aaKnown RBP13.27□□□□□ -0.29
SAM50YNL026W ARO1P08566 1588 aaKnown RBP13.25□□□□□ -0.29
SAM50YNL026W SAS10Q12136 610 aaPredicted RBP13.23□□□□□ -0.29
SAM50YNL026W TAF7Q05021 590 aa13.17□□□□□ -0.3
SAM50YNL026W IFH1P39520 1085 aa13.13□□□□□ -0.31
SAM50YNL026W CHC1P22137 1653 aaKnown RBP13.13□□□□□ -0.31
SAM50YNL026W YAP3P38749 330 aa13.12□□□□□ -0.31
SAM50YNL026W DNF3Q12674 1656 aa13.09□□□□□ -0.31
SAM50YNL026W CAT8P39113 1433 aa13.09□□□□□ -0.31
SAM50YNL026W YSP2Q06681 1438 aa13.05□□□□□ -0.32
SAM50YNL026W GEA1P47102 1408 aaPredicted RBP13.02□□□□□ -0.32
SAM50YNL026W SEC7P11075 2009 aaKnown RBP13.02□□□□□ -0.32
SAM50YNL026W MAK10Q02197 733 aa13.01□□□□□ -0.33
SAM50YNL026W BNR1P40450 1375 aa13□□□□□ -0.33
SAM50YNL026W CKB1P43639 278 aa13□□□□□ -0.33
SAM50YNL026W TY3B-GQ99315 1547 aa12.99□□□□□ -0.33
SAM50YNL026W URN1Q06525 465 aaKnown RBP12.91□□□□□ -0.34
SAM50YNL026W YBT1P32386 1661 aa12.9□□□□□ -0.34
SAM50YNL026W IPL1P38991 367 aa12.77□□□□□ -0.37
SAM50YNL026W SRB8P25648 1427 aa12.74□□□□□ -0.37
SAM50YNL026W YMR196WQ04336 1088 aa12.72□□□□□ -0.37
SAM50YNL026W THI12P42883 340 aa12.71□□□□□ -0.38
SAM50YNL026W THI5P43534 340 aa12.71□□□□□ -0.38
SAM50YNL026W THI11P47183 340 aa12.71□□□□□ -0.38
SAM50YNL026W THI13Q07748 340 aa12.71□□□□□ -0.38
SAM50YNL026W HAP1P0CE41 1502 aa12.7□□□□□ -0.38
SAM50YNL026W USO1P25386 1790 aa12.69□□□□□ -0.38
SAM50YNL026W TYS1P36421 394 aaKnown RBP12.67□□□□□ -0.38
SAM50YNL026W BUD21Q08492 214 aaPredicted RBP12.65□□□□□ -0.38
SAM50YNL026W IML1P47170 1584 aa12.64□□□□□ -0.39
SAM50YNL026W VMR1P38735 1592 aa12.6□□□□□ -0.39
SAM50YNL026W NUP188P52593 1655 aaKnown RBP12.59□□□□□ -0.39
SAM50YNL026W TY1B-NL2Q99337 1749 aaKnown RBP12.59□□□□□ -0.39
SAM50YNL026W PDR5P33302 1511 aaKnown RBP12.5□□□□□ -0.41
SAM50YNL026W YAH1Q12184 172 aaKnown RBP12.47□□□□□ -0.41
SAM50YNL026W GLN1P32288 370 aaKnown RBP12.42□□□□□ -0.42
SAM50YNL026W APP1P53933 587 aa12.36□□□□□ -0.43
SAM50YNL026W PTP3P40048 928 aa12.35□□□□□ -0.43
SAM50YNL026W CFT1Q06632 1357 aaKnown RBP12.34□□□□□ -0.43
SAM50YNL026W YIL055CP40523 627 aaKnown RBP12.34□□□□□ -0.43
SAM50YNL026W PDR11P40550 1411 aa12.33□□□□□ -0.44
SAM50YNL026W KRE5P22023 1365 aa12.33□□□□□ -0.44
SAM50YNL026W RIA1P53893 1110 aa12.3□□□□□ -0.44
SAM50YNL026W IKI3Q06706 1349 aaKnown RBP12.28□□□□□ -0.44
SAM50YNL026W MRX12P47084 519 aa12.27□□□□□ -0.44
SAM50YNL026W YNR029CP53729 429 aaKnown RBP12.27□□□□□ -0.44
SAM50YNL026W SSM4P40318 1319 aa12.21□□□□□ -0.45
SAM50YNL026W BCK1Q01389 1478 aa12.21□□□□□ -0.45
SAM50YNL026W REB1P21538 810 aa12.18□□□□□ -0.46
SAM50YNL026W YMR074CQ04773 145 aa12.15□□□□□ -0.46
SAM50YNL026W ENT1Q12518 454 aa12.14□□□□□ -0.47
SAM50YNL026W PRI1P10363 409 aa12.13□□□□□ -0.47
SAM50YNL026W CAB1Q04430 367 aa12.12□□□□□ -0.47
SAM50YNL026W GCN2P15442 1659 aa12.11□□□□□ -0.47
SAM50YNL026W RAV1P47104 1357 aa12.1□□□□□ -0.47
SAM50YNL026W ENV9Q08651 330 aa12.1□□□□□ -0.47
SAM50YNL026W RAD9P14737 1309 aa12.09□□□□□ -0.47
SAM50YNL026W ALD4P46367 519 aaKnown RBP12.08□□□□□ -0.47
SAM50YNL026W TY3B-IQ7LHG5 1498 aaKnown RBP12.06□□□□□ -0.48
SAM50YNL026W PAF1P38351 445 aa12.03□□□□□ -0.48
SAM50YNL026W IMH1Q06704 911 aaKnown RBP12.03□□□□□ -0.48
SAM50YNL026W RTC1Q08281 1341 aa12.01□□□□□ -0.49
SAM50YNL026W NUP192P47054 1683 aa12□□□□□ -0.49
SAM50YNL026W BUD31P25337 157 aaPredicted RBP11.98□□□□□ -0.49
SAM50YNL026W BFR2Q06631 534 aaKnown RBP11.98□□□□□ -0.49
SAM50YNL026W PRP45P28004 379 aaPredicted RBP11.92□□□□□ -0.5
SAM50YNL026W CPS1P27614 576 aa11.89□□□□□ -0.51
SAM50YNL026W TAF5P38129 798 aa11.88□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms