RNA–Protein interactions for RNA: YMR269W

TMA23, Transcript of Nucleolar protein implicated in ribosome biogenesis, yeastyeast

Gene TMA23, Length 636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TMA23YMR269W TAF7Q05021 590 aa13.53□□□□□ -0.24
TMA23YMR269W NTE1Q04958 1679 aa13.53□□□□□ -0.24
TMA23YMR269W NUP159P40477 1460 aa13.52□□□□□ -0.25
TMA23YMR269W MLP2P40457 1679 aa13.52□□□□□ -0.25
TMA23YMR269W PDR15Q04182 1529 aaKnown RBP13.5□□□□□ -0.25
TMA23YMR269W RPO21P04050 1733 aaKnown RBP13.5□□□□□ -0.25
TMA23YMR269W ULS1Q08562 1619 aa13.5□□□□□ -0.25
TMA23YMR269W IFH1P39520 1085 aa13.44□□□□□ -0.26
TMA23YMR269W RTT106P40161 455 aa13.41□□□□□ -0.26
TMA23YMR269W YRF1-1P0CX20 1796 aa13.4□□□□□ -0.26
TMA23YMR269W YRF1-5P0CX21 1796 aa13.4□□□□□ -0.26
TMA23YMR269W YRF1-8P0CX22 1796 aa13.4□□□□□ -0.26
TMA23YMR269W GEA2P39993 1459 aaKnown RBP13.37□□□□□ -0.27
TMA23YMR269W GEA1P47102 1408 aaPredicted RBP13.37□□□□□ -0.27
TMA23YMR269W VPS15P22219 1454 aa13.34□□□□□ -0.27
TMA23YMR269W MET10P39692 1035 aa13.31□□□□□ -0.28
TMA23YMR269W LTE1P07866 1435 aa13.3□□□□□ -0.28
TMA23YMR269W IRC20Q06554 1556 aa13.3□□□□□ -0.28
TMA23YMR269W TY3B-GQ99315 1547 aa13.27□□□□□ -0.29
TMA23YMR269W SPO14P36126 1683 aa13.26□□□□□ -0.29
TMA23YMR269W PDR12Q02785 1511 aa13.26□□□□□ -0.29
TMA23YMR269W NUP157P40064 1391 aaKnown RBP13.2□□□□□ -0.3
TMA23YMR269W GDB1Q06625 1536 aa13.2□□□□□ -0.3
TMA23YMR269W CAT8P39113 1433 aa13.18□□□□□ -0.3
TMA23YMR269W PDR10P51533 1564 aa13.17□□□□□ -0.3
TMA23YMR269W YBT1P32386 1661 aa13.17□□□□□ -0.3
TMA23YMR269W IKI3Q06706 1349 aaKnown RBP13.13□□□□□ -0.31
TMA23YMR269W DRS2P39524 1355 aa13.1□□□□□ -0.31
TMA23YMR269W NUP170P38181 1502 aa13.1□□□□□ -0.31
TMA23YMR269W ITT1Q04638 464 aa13.09□□□□□ -0.31
TMA23YMR269W IQG1Q12280 1495 aa13.09□□□□□ -0.31
TMA23YMR269W BNI1P41832 1953 aa13.08□□□□□ -0.32
TMA23YMR269W ARO1P08566 1588 aaKnown RBP13.07□□□□□ -0.32
TMA23YMR269W CKB1P43639 278 aa13.06□□□□□ -0.32
TMA23YMR269W BUD3P25558 1636 aa13.02□□□□□ -0.33
TMA23YMR269W SSM4P40318 1319 aa13.01□□□□□ -0.33
TMA23YMR269W SRB8P25648 1427 aa12.97□□□□□ -0.33
TMA23YMR269W YSP2Q06681 1438 aa12.97□□□□□ -0.33
TMA23YMR269W MMS1Q06211 1407 aa12.94□□□□□ -0.34
TMA23YMR269W TRM3Q07527 1436 aa12.92□□□□□ -0.34
TMA23YMR269W DOP1Q03921 1698 aa12.91□□□□□ -0.34
TMA23YMR269W BNR1P40450 1375 aa12.88□□□□□ -0.35
TMA23YMR269W SEC7P11075 2009 aaKnown RBP12.85□□□□□ -0.35
TMA23YMR269W BUD21Q08492 214 aaPredicted RBP12.84□□□□□ -0.35
TMA23YMR269W CHC1P22137 1653 aaKnown RBP12.82□□□□□ -0.36
TMA23YMR269W DNF2Q12675 1612 aa12.75□□□□□ -0.37
TMA23YMR269W ABP1P15891 592 aaKnown RBP12.67□□□□□ -0.38
TMA23YMR269W GCN2P15442 1659 aa12.65□□□□□ -0.38
TMA23YMR269W YOR093CQ12275 1648 aa12.62□□□□□ -0.39
TMA23YMR269W VMR1P38735 1592 aa12.58□□□□□ -0.4
TMA23YMR269W NUP188P52593 1655 aaKnown RBP12.57□□□□□ -0.4
TMA23YMR269W YAP3P38749 330 aa12.56□□□□□ -0.4
TMA23YMR269W URN1Q06525 465 aaKnown RBP12.55□□□□□ -0.4
TMA23YMR269W PDR5P33302 1511 aaKnown RBP12.55□□□□□ -0.4
TMA23YMR269W IPL1P38991 367 aa12.51□□□□□ -0.41
TMA23YMR269W PDR11P40550 1411 aa12.51□□□□□ -0.41
TMA23YMR269W IML1P47170 1584 aa12.51□□□□□ -0.41
TMA23YMR269W TYS1P36421 394 aaKnown RBP12.5□□□□□ -0.41
TMA23YMR269W PAF1P38351 445 aa12.48□□□□□ -0.41
TMA23YMR269W DNF3Q12674 1656 aa12.47□□□□□ -0.41
TMA23YMR269W NOP7P53261 605 aaKnown RBP12.46□□□□□ -0.41
TMA23YMR269W BFR2Q06631 534 aaKnown RBP12.42□□□□□ -0.42
TMA23YMR269W RAV1P47104 1357 aa12.42□□□□□ -0.42
TMA23YMR269W MIF2P35201 549 aa12.4□□□□□ -0.42
TMA23YMR269W RTC1Q08281 1341 aa12.36□□□□□ -0.43
TMA23YMR269W MAK10Q02197 733 aa12.34□□□□□ -0.43
TMA23YMR269W HAP1P0CE41 1502 aa12.33□□□□□ -0.44
TMA23YMR269W NUP192P47054 1683 aa12.26□□□□□ -0.45
TMA23YMR269W TAF5P38129 798 aa12.24□□□□□ -0.45
TMA23YMR269W RAD9P14737 1309 aa12.2□□□□□ -0.46
TMA23YMR269W ESL2P36168 1195 aa12.2□□□□□ -0.46
TMA23YMR269W ALD4P46367 519 aaKnown RBP12.19□□□□□ -0.46
TMA23YMR269W BCK1Q01389 1478 aa12.19□□□□□ -0.46
TMA23YMR269W KRE5P22023 1365 aa12.18□□□□□ -0.46
TMA23YMR269W CAB1Q04430 367 aa12.17□□□□□ -0.46
TMA23YMR269W ORC1P54784 914 aaPredicted RBP12.16□□□□□ -0.46
TMA23YMR269W MRX12P47084 519 aa12.15□□□□□ -0.46
TMA23YMR269W POL5P39985 1022 aaKnown RBP12.14□□□□□ -0.47
TMA23YMR269W USO1P25386 1790 aa12.14□□□□□ -0.47
TMA23YMR269W TY3B-IQ7LHG5 1498 aaKnown RBP12.14□□□□□ -0.47
TMA23YMR269W RIA1P53893 1110 aa12.13□□□□□ -0.47
TMA23YMR269W CFT1Q06632 1357 aaKnown RBP12.11□□□□□ -0.47
TMA23YMR269W TAF8Q03750 510 aa12.11□□□□□ -0.47
TMA23YMR269W KIP3P53086 805 aaKnown RBP12.1□□□□□ -0.47
TMA23YMR269W TY1B-NL2Q99337 1749 aaKnown RBP12.08□□□□□ -0.47
TMA23YMR269W YFR006WP43590 535 aa12.06□□□□□ -0.48
TMA23YMR269W SPE2P21182 396 aa12.05□□□□□ -0.48
TMA23YMR269W YMR196WQ04336 1088 aa12.05□□□□□ -0.48
TMA23YMR269W YLR419WQ06698 1435 aaKnown RBP12.04□□□□□ -0.48
TMA23YMR269W NAP1P25293 417 aaKnown RBP12.04□□□□□ -0.48
TMA23YMR269W YNR029CP53729 429 aaKnown RBP12.03□□□□□ -0.48
TMA23YMR269W THI12P42883 340 aa12.02□□□□□ -0.49
TMA23YMR269W THI5P43534 340 aa12.02□□□□□ -0.49
TMA23YMR269W THI11P47183 340 aa12.02□□□□□ -0.49
TMA23YMR269W THI13Q07748 340 aa12.02□□□□□ -0.49
TMA23YMR269W MHP1P43638 1398 aa11.95□□□□□ -0.5
TMA23YMR269W RCM1P53972 490 aa11.95□□□□□ -0.5
TMA23YMR269W CHZ1P40019 153 aaPredicted RBP11.93□□□□□ -0.5
TMA23YMR269W PPH3P32345 308 aa11.92□□□□□ -0.5
TMA23YMR269W SCT1P32784 759 aa11.9□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms