RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C SPT5P27692 1063 aaKnown RBP1.47□□□□□ -2.17
RKR1YMR247C SIS2P36024 562 aa1.47□□□□□ -2.17
RKR1YMR247C PTC4P38089 393 aa1.47□□□□□ -2.17
RKR1YMR247C KEX1P09620 729 aa1.47□□□□□ -2.17
RKR1YMR247C RPP2BP02400 110 aaKnown RBP1.47□□□□□ -2.17
RKR1YMR247C RPP1AP05318 106 aaPredicted RBP1.47□□□□□ -2.17
RKR1YMR247C MRM1P25270 412 aa1.47□□□□□ -2.17
RKR1YMR247C VMA1P17255 1071 aaKnown RBP1.46□□□□□ -2.17
RKR1YMR247C BUD31P25337 157 aaPredicted RBP1.46□□□□□ -2.17
RKR1YMR247C VPS29P38759 282 aa1.46□□□□□ -2.17
RKR1YMR247C GYP5Q12344 894 aa1.46□□□□□ -2.17
RKR1YMR247C SSA2P10592 639 aaKnown RBP1.46□□□□□ -2.18
RKR1YMR247C COQ8P27697 501 aa1.46□□□□□ -2.18
RKR1YMR247C MRF1P30775 413 aaPredicted RBP1.46□□□□□ -2.18
RKR1YMR247C MIF2P35201 549 aa1.46□□□□□ -2.18
RKR1YMR247C CSE4P36012 229 aa1.46□□□□□ -2.18
RKR1YMR247C ATG3P40344 310 aa1.46□□□□□ -2.18
RKR1YMR247C MAM3Q12296 706 aa1.46□□□□□ -2.18
RKR1YMR247C PAT1P25644 796 aaKnown RBP1.45□□□□□ -2.18
RKR1YMR247C MRX12P47084 519 aa1.45□□□□□ -2.18
RKR1YMR247C PTC3P34221 468 aaKnown RBP1.45□□□□□ -2.18
RKR1YMR247C HPC2Q01448 625 aa1.45□□□□□ -2.18
RKR1YMR247C SPT23P35210 1082 aa1.45□□□□□ -2.18
RKR1YMR247C PBS2P08018 668 aa1.45□□□□□ -2.18
RKR1YMR247C RAM2P29703 316 aa1.45□□□□□ -2.18
RKR1YMR247C DBP1P24784 617 aaKnown RBP1.44□□□□□ -2.18
RKR1YMR247C TPD3P31383 635 aa1.44□□□□□ -2.18
RKR1YMR247C VNX1P42839 908 aa1.44□□□□□ -2.18
RKR1YMR247C YPP1P46951 817 aa1.44□□□□□ -2.18
RKR1YMR247C YGR273CP53329 174 aa1.44□□□□□ -2.18
RKR1YMR247C SPP1Q03012 353 aa1.44□□□□□ -2.18
RKR1YMR247C YML082WQ04533 649 aaKnown RBP1.44□□□□□ -2.18
RKR1YMR247C YOL036WQ08206 761 aa1.44□□□□□ -2.18
RKR1YMR247C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
RKR1YMR247C BNI4P53858 892 aa1.44□□□□□ -2.18
RKR1YMR247C ISU2Q12056 156 aa1.44□□□□□ -2.18
RKR1YMR247C CHL1P22516 861 aaPredicted RBP1.43□□□□□ -2.18
RKR1YMR247C RAD54P32863 898 aa1.43□□□□□ -2.18
RKR1YMR247C DMA1P38823 416 aa1.43□□□□□ -2.18
RKR1YMR247C PEX21P50091 288 aa1.43□□□□□ -2.18
RKR1YMR247C ULI1P43604 169 aa1.43□□□□□ -2.18
RKR1YMR247C ARH1P48360 493 aa1.43□□□□□ -2.18
RKR1YMR247C NAF1P53919 492 aaKnown RBP1.43□□□□□ -2.18
RKR1YMR247C YDL129WQ07555 291 aa1.43□□□□□ -2.18
RKR1YMR247C NCR1Q12200 1170 aa1.43□□□□□ -2.18
RKR1YMR247C BMT6Q12291 365 aa1.43□□□□□ -2.18
RKR1YMR247C SPB4P25808 606 aaPredicted RBP1.43□□□□□ -2.18
RKR1YMR247C YJL171CP46992 396 aa1.43□□□□□ -2.18
RKR1YMR247C CST9Q06032 482 aa1.43□□□□□ -2.18
RKR1YMR247C IOC2Q12072 812 aa1.43□□□□□ -2.18
RKR1YMR247C FKH1P40466 484 aa1.42□□□□□ -2.18
RKR1YMR247C UTP13Q05946 817 aaKnown RBP1.42□□□□□ -2.18
RKR1YMR247C GAP1P19145 602 aaPredicted RBP1.42□□□□□ -2.18
RKR1YMR247C DAN4P47179 1161 aa1.42□□□□□ -2.18
RKR1YMR247C DPL1Q05567 589 aa1.42□□□□□ -2.18
RKR1YMR247C LAM6Q08001 693 aa1.42□□□□□ -2.18
RKR1YMR247C RTG1P32607 177 aa1.42□□□□□ -2.18
RKR1YMR247C YBR287WP38355 427 aa1.42□□□□□ -2.18
RKR1YMR247C NPL4P33755 580 aa1.41□□□□□ -2.18
RKR1YMR247C PRE3P38624 215 aa1.41□□□□□ -2.18
RKR1YMR247C TRP5P00931 707 aaKnown RBP1.41□□□□□ -2.18
RKR1YMR247C NAP1P25293 417 aaKnown RBP1.41□□□□□ -2.18
RKR1YMR247C YEL023CP39992 682 aa1.41□□□□□ -2.18
RKR1YMR247C HAP5Q02516 242 aa1.41□□□□□ -2.18
RKR1YMR247C YEL077CQ3E7X8 1277 aa1.41□□□□□ -2.18
RKR1YMR247C DCD1P06773 312 aa1.41□□□□□ -2.18
RKR1YMR247C YFL034WP43564 1073 aa1.41□□□□□ -2.18
RKR1YMR247C VPS70P47161 811 aa1.41□□□□□ -2.18
RKR1YMR247C ATF2P53296 535 aa1.4□□□□□ -2.18
RKR1YMR247C NST1P53935 1240 aa1.4□□□□□ -2.18
RKR1YMR247C PEX29Q03370 554 aa1.4□□□□□ -2.18
RKR1YMR247C STS1P38637 319 aa1.4□□□□□ -2.19
RKR1YMR247C BRL1P38770 471 aa1.4□□□□□ -2.19
RKR1YMR247C XDJ1P39102 459 aa1.4□□□□□ -2.19
RKR1YMR247C PTC2P39966 464 aaKnown RBP1.4□□□□□ -2.19
RKR1YMR247C TAF7Q05021 590 aa1.4□□□□□ -2.19
RKR1YMR247C TEA1P47988 759 aa1.4□□□□□ -2.19
RKR1YMR247C HST2P53686 357 aa1.4□□□□□ -2.19
RKR1YMR247C SIT4P20604 311 aa1.39□□□□□ -2.19
RKR1YMR247C ORC6P38826 435 aa1.39□□□□□ -2.19
RKR1YMR247C BCK2P33306 851 aa1.39□□□□□ -2.19
RKR1YMR247C UBP14P38237 781 aaKnown RBP1.39□□□□□ -2.19
RKR1YMR247C YNL115CP53925 644 aa1.39□□□□□ -2.19
RKR1YMR247C YLR326WQ06170 240 aaKnown RBP1.39□□□□□ -2.19
RKR1YMR247C SIS1P25294 352 aaKnown RBP1.39□□□□□ -2.19
RKR1YMR247C KXD1P53158 218 aa1.39□□□□□ -2.19
RKR1YMR247C RLF2Q12495 606 aa1.39□□□□□ -2.19
RKR1YMR247C LDB19Q12502 818 aa1.39□□□□□ -2.19
RKR1YMR247C KRI1P42846 591 aaKnown RBP1.38□□□□□ -2.19
RKR1YMR247C PUS6P53294 404 aa1.38□□□□□ -2.19
RKR1YMR247C AIR2Q12476 344 aaKnown RBP1.38□□□□□ -2.19
RKR1YMR247C GLN1P32288 370 aaKnown RBP1.38□□□□□ -2.19
RKR1YMR247C DCW1P36091 449 aa1.38□□□□□ -2.19
RKR1YMR247C EDS1P38073 919 aa1.38□□□□□ -2.19
RKR1YMR247C RPA14P50106 137 aa1.38□□□□□ -2.19
RKR1YMR247C YDR090CQ03193 310 aa1.38□□□□□ -2.19
RKR1YMR247C GCR2Q01722 534 aa1.38□□□□□ -2.19
RKR1YMR247C NUP42P49686 430 aaKnown RBP1.37□□□□□ -2.19
RKR1YMR247C URN1Q06525 465 aaKnown RBP1.37□□□□□ -2.19
RKR1YMR247C ERG12P07277 443 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms