RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A HTA1P04911 132 aaKnown RBP5.72□□□□□ -1.49
YMR172C-AYMR172C-A HTA2P04912 132 aa5.72□□□□□ -1.49
YMR172C-AYMR172C-A DCW1P36091 449 aa5.71□□□□□ -1.5
YMR172C-AYMR172C-A PTC4P38089 393 aa5.71□□□□□ -1.5
YMR172C-AYMR172C-A XDJ1P39102 459 aa5.68□□□□□ -1.5
YMR172C-AYMR172C-A YEL023CP39992 682 aa5.68□□□□□ -1.5
YMR172C-AYMR172C-A VRP1P37370 817 aa5.66□□□□□ -1.5
YMR172C-AYMR172C-A MIF2P35201 549 aa5.63□□□□□ -1.51
YMR172C-AYMR172C-A GRE2Q12068 342 aaKnown RBP5.62□□□□□ -1.51
YMR172C-AYMR172C-A ELP4Q02884 456 aaKnown RBP5.6□□□□□ -1.51
YMR172C-AYMR172C-A ATH1P48016 1211 aa5.59□□□□□ -1.51
YMR172C-AYMR172C-A PML39Q03760 334 aa5.59□□□□□ -1.51
YMR172C-AYMR172C-A DPS1P04802 557 aaKnown RBP5.57□□□□□ -1.52
YMR172C-AYMR172C-A YDR344CQ05510 147 aa5.57□□□□□ -1.52
YMR172C-AYMR172C-A MAK11P20484 414 aaKnown RBP5.55□□□□□ -1.52
YMR172C-AYMR172C-A RAM2P29703 316 aa5.52□□□□□ -1.53
YMR172C-AYMR172C-A GUT1P32190 709 aa5.52□□□□□ -1.53
YMR172C-AYMR172C-A PTC3P34221 468 aaKnown RBP5.52□□□□□ -1.53
YMR172C-AYMR172C-A ARH1P48360 493 aa5.52□□□□□ -1.53
YMR172C-AYMR172C-A PEX29Q03370 554 aa5.51□□□□□ -1.53
YMR172C-AYMR172C-A EDS1P38073 919 aa5.5□□□□□ -1.53
YMR172C-AYMR172C-A COQ8P27697 501 aa5.48□□□□□ -1.53
YMR172C-AYMR172C-A SPT23P35210 1082 aa5.48□□□□□ -1.53
YMR172C-AYMR172C-A MID1P41821 548 aa5.48□□□□□ -1.53
YMR172C-AYMR172C-A RGA2Q06407 1009 aa5.48□□□□□ -1.53
YMR172C-AYMR172C-A NST1P53935 1240 aa5.43□□□□□ -1.54
YMR172C-AYMR172C-A HAP5Q02516 242 aa5.41□□□□□ -1.54
YMR172C-AYMR172C-A SRC1Q03707 834 aa5.41□□□□□ -1.54
YMR172C-AYMR172C-A MPH3P0CE00 602 aa5.4□□□□□ -1.54
YMR172C-AYMR172C-A AI4P03878 556 aa5.39□□□□□ -1.55
YMR172C-AYMR172C-A SOL3P38858 249 aa5.39□□□□□ -1.55
YMR172C-AYMR172C-A RGA1P39083 1007 aa5.39□□□□□ -1.55
YMR172C-AYMR172C-A BNI4P53858 892 aa5.39□□□□□ -1.55
YMR172C-AYMR172C-A YML082WQ04533 649 aaKnown RBP5.39□□□□□ -1.55
YMR172C-AYMR172C-A PTC2P39966 464 aaKnown RBP5.38□□□□□ -1.55
YMR172C-AYMR172C-A YGR273CP53329 174 aa5.34□□□□□ -1.55
YMR172C-AYMR172C-A ILV3P39522 585 aaKnown RBP5.33□□□□□ -1.56
YMR172C-AYMR172C-A MPC54Q08550 464 aa5.33□□□□□ -1.56
YMR172C-AYMR172C-A NOP53Q12080 455 aaKnown RBP5.32□□□□□ -1.56
YMR172C-AYMR172C-A NMA111P53920 997 aa5.3□□□□□ -1.56
YMR172C-AYMR172C-A SLI15P38283 698 aa5.29□□□□□ -1.56
YMR172C-AYMR172C-A RAS1P01119 309 aa5.28□□□□□ -1.56
YMR172C-AYMR172C-A DPL1Q05567 589 aa5.28□□□□□ -1.56
YMR172C-AYMR172C-A KEX1P09620 729 aa5.23□□□□□ -1.57
YMR172C-AYMR172C-A SET1P38827 1080 aaKnown RBP5.22□□□□□ -1.57
YMR172C-AYMR172C-A GYP1Q08484 637 aa5.22□□□□□ -1.57
YMR172C-AYMR172C-A VHR2P40041 505 aa5.21□□□□□ -1.58
YMR172C-AYMR172C-A ISU2Q12056 156 aa5.21□□□□□ -1.58
YMR172C-AYMR172C-A YPR015CQ12531 247 aa5.21□□□□□ -1.58
YMR172C-AYMR172C-A TRK1P12685 1235 aa5.2□□□□□ -1.58
YMR172C-AYMR172C-A RPP1BP10622 106 aaKnown RBP5.19□□□□□ -1.58
YMR172C-AYMR172C-A RAM1P22007 431 aa5.19□□□□□ -1.58
YMR172C-AYMR172C-A AMS1P22855 1083 aa5.19□□□□□ -1.58
YMR172C-AYMR172C-A CDC73Q06697 393 aa5.19□□□□□ -1.58
YMR172C-AYMR172C-A RAD54P32863 898 aa5.17□□□□□ -1.58
YMR172C-AYMR172C-A KIC1P38692 1080 aa5.16□□□□□ -1.58
YMR172C-AYMR172C-A YLR326WQ06170 240 aaKnown RBP5.16□□□□□ -1.58
YMR172C-AYMR172C-A SAS4Q04003 481 aa5.15□□□□□ -1.59
YMR172C-AYMR172C-A PDR1P12383 1068 aa5.13□□□□□ -1.59
YMR172C-AYMR172C-A PCS60P38137 543 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
YMR172C-AYMR172C-A UBP14P38237 781 aaKnown RBP5.13□□□□□ -1.59
YMR172C-AYMR172C-A PEX21P50091 288 aa5.13□□□□□ -1.59
YMR172C-AYMR172C-A SDH2P21801 266 aa5.1□□□□□ -1.59
YMR172C-AYMR172C-A YPL062WQ02781 134 aa5.1□□□□□ -1.59
YMR172C-AYMR172C-A YEL077CQ3E7X8 1277 aa5.1□□□□□ -1.59
YMR172C-AYMR172C-A IFH1P39520 1085 aa5.09□□□□□ -1.59
YMR172C-AYMR172C-A MRF1P30775 413 aaPredicted RBP5.07□□□□□ -1.6
YMR172C-AYMR172C-A YRR1Q12172 810 aa5.07□□□□□ -1.6
YMR172C-AYMR172C-A NPL4P33755 580 aa5.04□□□□□ -1.6
YMR172C-AYMR172C-A TUM1Q08686 304 aaKnown RBP5.03□□□□□ -1.6
YMR172C-AYMR172C-A PRT1P06103 763 aaKnown RBP5.02□□□□□ -1.61
YMR172C-AYMR172C-A ERG12P07277 443 aa5.02□□□□□ -1.61
YMR172C-AYMR172C-A REF2P42073 533 aaPredicted RBP5.01□□□□□ -1.61
YMR172C-AYMR172C-A GCR2Q01722 534 aa5.01□□□□□ -1.61
YMR172C-AYMR172C-A YDR090CQ03193 310 aa5.01□□□□□ -1.61
YMR172C-AYMR172C-A CSC1Q06538 782 aa5.01□□□□□ -1.61
YMR172C-AYMR172C-A NUD1P32336 851 aa5□□□□□ -1.61
YMR172C-AYMR172C-A BUD20Q08004 166 aaPredicted RBP5□□□□□ -1.61
YMR172C-AYMR172C-A TFB4Q12004 338 aa5□□□□□ -1.61
YMR172C-AYMR172C-A GBP2P25555 427 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
YMR172C-AYMR172C-A BRE2P43132 505 aa4.99□□□□□ -1.61
YMR172C-AYMR172C-A VPS70P47161 811 aa4.99□□□□□ -1.61
YMR172C-AYMR172C-A GAR1P28007 205 aaKnown RBP4.98□□□□□ -1.61
YMR172C-AYMR172C-A GCD11P32481 527 aaKnown RBP4.98□□□□□ -1.61
YMR172C-AYMR172C-A STR2P47164 639 aa4.98□□□□□ -1.61
YMR172C-AYMR172C-A ISM1P48526 1002 aa4.98□□□□□ -1.61
YMR172C-AYMR172C-A SPT16P32558 1035 aaKnown RBP4.97□□□□□ -1.61
YMR172C-AYMR172C-A AIR1P40507 360 aaKnown RBP4.94□□□□□ -1.62
YMR172C-AYMR172C-A YPR148CQ06523 435 aa4.94□□□□□ -1.62
YMR172C-AYMR172C-A GAP1P19145 602 aaPredicted RBP4.93□□□□□ -1.62
YMR172C-AYMR172C-A PAT1P25644 796 aaKnown RBP4.93□□□□□ -1.62
YMR172C-AYMR172C-A FRK1Q03002 865 aaPredicted RBP4.93□□□□□ -1.62
YMR172C-AYMR172C-A ORC6P38826 435 aa4.92□□□□□ -1.62
YMR172C-AYMR172C-A CST6P40535 587 aa4.92□□□□□ -1.62
YMR172C-AYMR172C-A MAK21Q12176 1025 aaKnown RBP4.92□□□□□ -1.62
YMR172C-AYMR172C-A COX6P00427 148 aa4.91□□□□□ -1.62
YMR172C-AYMR172C-A RRN7P40992 514 aa4.91□□□□□ -1.62
YMR172C-AYMR172C-A CLA4P48562 842 aa4.91□□□□□ -1.62
YMR172C-AYMR172C-A MVP1P40959 511 aaKnown RBP4.9□□□□□ -1.63
YMR172C-AYMR172C-A YPR109WQ06104 294 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms