RNA–Protein interactions for RNA: YMR008C

PLB1, Transcript of Phospholipase B (lysophospholipase) involved in lipid metabolism, yeastyeast

Gene PLB1, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PLB1YMR008C TY1B-BLQ12490 1755 aa14.57□□□□□ -0.08
PLB1YMR008C ESC1Q03661 1658 aaKnown RBP14.57□□□□□ -0.08
PLB1YMR008C SNT2P53127 1403 aa14.56□□□□□ -0.08
PLB1YMR008C MTC1P47018 478 aaKnown RBP14.54□□□□□ -0.08
PLB1YMR008C DNF1P32660 1571 aa14.53□□□□□ -0.08
PLB1YMR008C RPA190P10964 1664 aaKnown RBP14.49□□□□□ -0.09
PLB1YMR008C NUP170P38181 1502 aa14.48□□□□□ -0.09
PLB1YMR008C TY3B-GQ99315 1547 aa14.43□□□□□ -0.1
PLB1YMR008C NTE1Q04958 1679 aa14.42□□□□□ -0.1
PLB1YMR008C SSM4P40318 1319 aa14.4□□□□□ -0.1
PLB1YMR008C RPO21P04050 1733 aaKnown RBP14.39□□□□□ -0.11
PLB1YMR008C GEA2P39993 1459 aaKnown RBP14.38□□□□□ -0.11
PLB1YMR008C RTT106P40161 455 aa14.38□□□□□ -0.11
PLB1YMR008C IRC20Q06554 1556 aa14.34□□□□□ -0.11
PLB1YMR008C NUP159P40477 1460 aa14.32□□□□□ -0.12
PLB1YMR008C VPS15P22219 1454 aa14.3□□□□□ -0.12
PLB1YMR008C YBT1P32386 1661 aa14.3□□□□□ -0.12
PLB1YMR008C CAT8P39113 1433 aa14.27□□□□□ -0.12
PLB1YMR008C MET5P47169 1442 aa14.21□□□□□ -0.13
PLB1YMR008C MET10P39692 1035 aa14.2□□□□□ -0.14
PLB1YMR008C YRF1-1P0CX20 1796 aa14.19□□□□□ -0.14
PLB1YMR008C YRF1-5P0CX21 1796 aa14.19□□□□□ -0.14
PLB1YMR008C YRF1-8P0CX22 1796 aa14.19□□□□□ -0.14
PLB1YMR008C PDR12Q02785 1511 aa14.18□□□□□ -0.14
PLB1YMR008C GDB1Q06625 1536 aa14.17□□□□□ -0.14
PLB1YMR008C PDR10P51533 1564 aa14.16□□□□□ -0.14
PLB1YMR008C SPO14P36126 1683 aa14.14□□□□□ -0.15
PLB1YMR008C ARO1P08566 1588 aaKnown RBP14.12□□□□□ -0.15
PLB1YMR008C NUP157P40064 1391 aaKnown RBP14.11□□□□□ -0.15
PLB1YMR008C SRB8P25648 1427 aa14.11□□□□□ -0.15
PLB1YMR008C CKB1P43639 278 aa14.07□□□□□ -0.16
PLB1YMR008C BUD3P25558 1636 aa13.99□□□□□ -0.17
PLB1YMR008C YSP2Q06681 1438 aa13.98□□□□□ -0.17
PLB1YMR008C IQG1Q12280 1495 aa13.93□□□□□ -0.18
PLB1YMR008C BUD21Q08492 214 aaPredicted RBP13.92□□□□□ -0.18
PLB1YMR008C MMS1Q06211 1407 aa13.91□□□□□ -0.18
PLB1YMR008C GCN2P15442 1659 aa13.89□□□□□ -0.19
PLB1YMR008C LTE1P07866 1435 aa13.83□□□□□ -0.19
PLB1YMR008C SEC7P11075 2009 aaKnown RBP13.82□□□□□ -0.2
PLB1YMR008C BNR1P40450 1375 aa13.81□□□□□ -0.2
PLB1YMR008C POL5P39985 1022 aaKnown RBP13.74□□□□□ -0.21
PLB1YMR008C NOP7P53261 605 aaKnown RBP13.71□□□□□ -0.22
PLB1YMR008C DRS2P39524 1355 aa13.7□□□□□ -0.22
PLB1YMR008C TRM3Q07527 1436 aa13.7□□□□□ -0.22
PLB1YMR008C YOR093CQ12275 1648 aa13.69□□□□□ -0.22
PLB1YMR008C DOP1Q03921 1698 aa13.69□□□□□ -0.22
PLB1YMR008C CHC1P22137 1653 aaKnown RBP13.66□□□□□ -0.22
PLB1YMR008C PDR5P33302 1511 aaKnown RBP13.66□□□□□ -0.22
PLB1YMR008C PAF1P38351 445 aa13.64□□□□□ -0.23
PLB1YMR008C BFR2Q06631 534 aaKnown RBP13.62□□□□□ -0.23
PLB1YMR008C ITT1Q04638 464 aa13.6□□□□□ -0.23
PLB1YMR008C VMR1P38735 1592 aa13.58□□□□□ -0.24
PLB1YMR008C BNI1P41832 1953 aa13.58□□□□□ -0.24
PLB1YMR008C PDR11P40550 1411 aa13.57□□□□□ -0.24
PLB1YMR008C RAV1P47104 1357 aa13.55□□□□□ -0.24
PLB1YMR008C NUP188P52593 1655 aaKnown RBP13.53□□□□□ -0.24
PLB1YMR008C NSR1P27476 414 aaKnown RBP RIP-Chip data13.51□□□□□ -0.25not detected
PLB1YMR008C RTC1Q08281 1341 aa13.51□□□□□ -0.25
PLB1YMR008C IML1P47170 1584 aa13.5□□□□□ -0.25
PLB1YMR008C DNF2Q12675 1612 aa13.46□□□□□ -0.25
PLB1YMR008C ORC1P54784 914 aaPredicted RBP13.43□□□□□ -0.26
PLB1YMR008C SEC3P33332 1336 aaKnown RBP13.43□□□□□ -0.26
PLB1YMR008C TY3B-IQ7LHG5 1498 aaKnown RBP13.43□□□□□ -0.26
PLB1YMR008C SPT7P35177 1332 aa13.41□□□□□ -0.26
PLB1YMR008C TYS1P36421 394 aaKnown RBP13.39□□□□□ -0.27
PLB1YMR008C TAF5P38129 798 aa13.39□□□□□ -0.27
PLB1YMR008C IPL1P38991 367 aa13.39□□□□□ -0.27
PLB1YMR008C MHP1P43638 1398 aa13.37□□□□□ -0.27
PLB1YMR008C URN1Q06525 465 aaKnown RBP13.37□□□□□ -0.27
PLB1YMR008C NUP192P47054 1683 aa13.37□□□□□ -0.27
PLB1YMR008C ENP1P38333 483 aaKnown RBP13.36□□□□□ -0.27
PLB1YMR008C ESL2P36168 1195 aa13.35□□□□□ -0.27
PLB1YMR008C YAP3P38749 330 aa13.3□□□□□ -0.28
PLB1YMR008C KIP3P53086 805 aaKnown RBP13.3□□□□□ -0.28
PLB1YMR008C YLR419WQ06698 1435 aaKnown RBP13.3□□□□□ -0.28
PLB1YMR008C PSD2P53037 1138 aaKnown RBP13.25□□□□□ -0.29
PLB1YMR008C PDS5Q04264 1277 aa13.22□□□□□ -0.29
PLB1YMR008C LEU3P08638 886 aa13.21□□□□□ -0.29
PLB1YMR008C ALD4P46367 519 aaKnown RBP13.2□□□□□ -0.3
PLB1YMR008C RAD9P14737 1309 aa13.2□□□□□ -0.3
PLB1YMR008C SPE2P21182 396 aa13.2□□□□□ -0.3
PLB1YMR008C HAP1P0CE41 1502 aa13.19□□□□□ -0.3
PLB1YMR008C BCK1Q01389 1478 aa13.18□□□□□ -0.3
PLB1YMR008C TAF8Q03750 510 aa13.16□□□□□ -0.3
PLB1YMR008C SCT1P32784 759 aa13.14□□□□□ -0.31
PLB1YMR008C CAB1Q04430 367 aa13.13□□□□□ -0.31
PLB1YMR008C DNF3Q12674 1656 aa13.12□□□□□ -0.31
PLB1YMR008C NST1P53935 1240 aa13.1□□□□□ -0.31
PLB1YMR008C PRS1P32895 427 aaKnown RBP13.07□□□□□ -0.32
PLB1YMR008C CHZ1P40019 153 aaPredicted RBP13.07□□□□□ -0.32
PLB1YMR008C NAP1P25293 417 aaKnown RBP13.05□□□□□ -0.32
PLB1YMR008C KRE5P22023 1365 aa13.04□□□□□ -0.32
PLB1YMR008C NOP2P40991 618 aaKnown RBP13.03□□□□□ -0.32
PLB1YMR008C RTG3P38165 486 aa13.03□□□□□ -0.32
PLB1YMR008C MRX12P47084 519 aa13.01□□□□□ -0.33
PLB1YMR008C FKH1P40466 484 aa13.01□□□□□ -0.33
PLB1YMR008C MLP1Q02455 1875 aaKnown RBP13.01□□□□□ -0.33
PLB1YMR008C MAK10Q02197 733 aa13□□□□□ -0.33
PLB1YMR008C ABP1P15891 592 aaKnown RBP12.98□□□□□ -0.33
PLB1YMR008C CFT1Q06632 1357 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms