RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W RGA1P39083 1007 aa7.78□□□□□ -1.16
CTK3YML112W SRC1Q03707 834 aa7.78□□□□□ -1.16
CTK3YML112W HTA1P04911 132 aaKnown RBP7.77□□□□□ -1.17
CTK3YML112W HTA2P04912 132 aa7.77□□□□□ -1.17
CTK3YML112W YEL023CP39992 682 aa7.77□□□□□ -1.17
CTK3YML112W RTG3P38165 486 aa7.75□□□□□ -1.17
CTK3YML112W PTC4P38089 393 aa7.74□□□□□ -1.17
CTK3YML112W CST9Q06032 482 aa7.74□□□□□ -1.17
CTK3YML112W ABP1P15891 592 aaKnown RBP7.72□□□□□ -1.17
CTK3YML112W RCR1P38212 213 aa7.72□□□□□ -1.17
CTK3YML112W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
CTK3YML112W ELP4Q02884 456 aaKnown RBP7.7□□□□□ -1.18
CTK3YML112W PML39Q03760 334 aa7.68□□□□□ -1.18
CTK3YML112W MGA2P40578 1113 aa7.56□□□□□ -1.2
CTK3YML112W MID1P41821 548 aa7.55□□□□□ -1.2
CTK3YML112W ARH1P48360 493 aa7.55□□□□□ -1.2
CTK3YML112W SPT23P35210 1082 aa7.45□□□□□ -1.22
CTK3YML112W GRE2Q12068 342 aaKnown RBP7.45□□□□□ -1.22
CTK3YML112W NST1P53935 1240 aa7.42□□□□□ -1.22
CTK3YML112W RAS1P01119 309 aa7.41□□□□□ -1.22
CTK3YML112W PEX29Q03370 554 aa7.38□□□□□ -1.23
CTK3YML112W HAP5Q02516 242 aa7.36□□□□□ -1.23
CTK3YML112W SOL3P38858 249 aa7.33□□□□□ -1.24
CTK3YML112W ILV3P39522 585 aaKnown RBP7.33□□□□□ -1.24
CTK3YML112W ATH1P48016 1211 aa7.33□□□□□ -1.24
CTK3YML112W EDS1P38073 919 aa7.32□□□□□ -1.24
CTK3YML112W BNI4P53858 892 aa7.32□□□□□ -1.24
CTK3YML112W YML082WQ04533 649 aaKnown RBP7.32□□□□□ -1.24
CTK3YML112W GUT1P32190 709 aa7.31□□□□□ -1.24
CTK3YML112W PTC2P39966 464 aaKnown RBP7.3□□□□□ -1.24
CTK3YML112W PTC3P34221 468 aaKnown RBP7.29□□□□□ -1.24
CTK3YML112W MIF2P35201 549 aa7.29□□□□□ -1.24
CTK3YML112W MPH3P0CE00 602 aa7.25□□□□□ -1.25
CTK3YML112W MPC54Q08550 464 aa7.24□□□□□ -1.25
CTK3YML112W YPR015CQ12531 247 aa7.24□□□□□ -1.25
CTK3YML112W AI4P03878 556 aa7.23□□□□□ -1.25
CTK3YML112W TRK1P12685 1235 aa7.21□□□□□ -1.26
CTK3YML112W RAM2P29703 316 aa7.18□□□□□ -1.26
CTK3YML112W YPL062WQ02781 134 aa7.18□□□□□ -1.26
CTK3YML112W NMA111P53920 997 aa7.15□□□□□ -1.26
CTK3YML112W MAK11P20484 414 aaKnown RBP7.13□□□□□ -1.27
CTK3YML112W AMS1P22855 1083 aa7.13□□□□□ -1.27
CTK3YML112W RAM1P22007 431 aa7.12□□□□□ -1.27
CTK3YML112W SDH2P21801 266 aa7.11□□□□□ -1.27
CTK3YML112W COQ8P27697 501 aa7.06□□□□□ -1.28
CTK3YML112W SLI15P38283 698 aa7.06□□□□□ -1.28
CTK3YML112W YGR273CP53329 174 aa7.04□□□□□ -1.28
CTK3YML112W DPL1Q05567 589 aa7.04□□□□□ -1.28
CTK3YML112W GYP1Q08484 637 aa7.03□□□□□ -1.28
CTK3YML112W PDR1P12383 1068 aa6.95□□□□□ -1.3
CTK3YML112W NOP53Q12080 455 aaKnown RBP6.95□□□□□ -1.3
CTK3YML112W GAR1P28007 205 aaKnown RBP6.93□□□□□ -1.3
CTK3YML112W SET1P38827 1080 aaKnown RBP6.92□□□□□ -1.3
CTK3YML112W ISU2Q12056 156 aa6.92□□□□□ -1.3
CTK3YML112W CDC73Q06697 393 aa6.9□□□□□ -1.3
CTK3YML112W AIR1P40507 360 aaKnown RBP6.88□□□□□ -1.31
CTK3YML112W YEL077CQ3E7X8 1277 aa6.88□□□□□ -1.31
CTK3YML112W BRE2P43132 505 aa6.87□□□□□ -1.31
CTK3YML112W CLA4P48562 842 aa6.85□□□□□ -1.31
CTK3YML112W SAS4Q04003 481 aa6.85□□□□□ -1.31
CTK3YML112W DMA1P38823 416 aa6.83□□□□□ -1.32
CTK3YML112W GBP2P25555 427 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
CTK3YML112W KEX1P09620 729 aa6.81□□□□□ -1.32
CTK3YML112W IFH1P39520 1085 aa6.77□□□□□ -1.33
CTK3YML112W CST6P40535 587 aa6.75□□□□□ -1.33
CTK3YML112W BUD20Q08004 166 aaPredicted RBP6.75□□□□□ -1.33
CTK3YML112W MRF1P30775 413 aaPredicted RBP6.72□□□□□ -1.33
CTK3YML112W GCR2Q01722 534 aa6.72□□□□□ -1.33
CTK3YML112W YPR148CQ06523 435 aa6.72□□□□□ -1.33
CTK3YML112W VPS70P47161 811 aa6.7□□□□□ -1.34
CTK3YML112W MET22P32179 357 aa6.69□□□□□ -1.34
CTK3YML112W UBP14P38237 781 aaKnown RBP6.69□□□□□ -1.34
CTK3YML112W VHR2P40041 505 aa6.68□□□□□ -1.34
CTK3YML112W PRT1P06103 763 aaKnown RBP6.67□□□□□ -1.34
CTK3YML112W STR2P47164 639 aa6.67□□□□□ -1.34
CTK3YML112W YLR326WQ06170 240 aaKnown RBP6.67□□□□□ -1.34
CTK3YML112W RQC2Q12532 1038 aaKnown RBP6.65□□□□□ -1.34
CTK3YML112W ERG12P07277 443 aa6.64□□□□□ -1.35
CTK3YML112W REF2P42073 533 aaPredicted RBP6.64□□□□□ -1.35
CTK3YML112W ISM1P48526 1002 aa6.64□□□□□ -1.35
CTK3YML112W LAM6Q08001 693 aa6.64□□□□□ -1.35
CTK3YML112W PCS60P38137 543 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
CTK3YML112W SAS10Q12136 610 aaPredicted RBP6.62□□□□□ -1.35
CTK3YML112W RAD54P32863 898 aa6.61□□□□□ -1.35
CTK3YML112W ENV9Q08651 330 aa6.61□□□□□ -1.35
CTK3YML112W YDR090CQ03193 310 aa6.6□□□□□ -1.35
CTK3YML112W YRR1Q12172 810 aa6.6□□□□□ -1.35
CTK3YML112W CKB1P43639 278 aa6.59□□□□□ -1.35
CTK3YML112W FRK1Q03002 865 aaPredicted RBP6.59□□□□□ -1.35
CTK3YML112W KIC1P38692 1080 aa6.58□□□□□ -1.36
CTK3YML112W YDL176WQ12027 708 aa6.58□□□□□ -1.36
CTK3YML112W CDC4P07834 779 aa6.57□□□□□ -1.36
CTK3YML112W YDR444WQ04093 687 aa6.56□□□□□ -1.36
CTK3YML112W COX6P00427 148 aa6.55□□□□□ -1.36
CTK3YML112W TY1A-DR4O74302 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-HP0C2I4 478 aaKnown RBP6.54□□□□□ -1.36
CTK3YML112W TY1A-AP0CX57 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-PR1P0CX58 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-ORP0CX59 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-PR2P0CX60 440 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms