RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeastyeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB1YML085C NUP159P40477 1460 aa10.9□□□□□ -0.67
TUB1YML085C SNQ2P32568 1501 aaKnown RBP10.86□□□□□ -0.67
TUB1YML085C RPO21P04050 1733 aaKnown RBP10.85□□□□□ -0.67
TUB1YML085C GEA2P39993 1459 aaKnown RBP10.84□□□□□ -0.67
TUB1YML085C RTT106P40161 455 aa10.83□□□□□ -0.68
TUB1YML085C SNT2P53127 1403 aa10.82□□□□□ -0.68
TUB1YML085C SAS10Q12136 610 aaPredicted RBP10.82□□□□□ -0.68
TUB1YML085C VPS15P22219 1454 aa10.8□□□□□ -0.68
TUB1YML085C MLP2P40457 1679 aa10.8□□□□□ -0.68
TUB1YML085C MET10P39692 1035 aa10.77□□□□□ -0.69
TUB1YML085C YRF1-1P0CX20 1796 aa10.76□□□□□ -0.69
TUB1YML085C YRF1-5P0CX21 1796 aa10.76□□□□□ -0.69
TUB1YML085C YRF1-8P0CX22 1796 aa10.76□□□□□ -0.69
TUB1YML085C PDR15Q04182 1529 aaKnown RBP10.74□□□□□ -0.69
TUB1YML085C PDR12Q02785 1511 aa10.7□□□□□ -0.7
TUB1YML085C DRS2P39524 1355 aa10.7□□□□□ -0.7
TUB1YML085C ULS1Q08562 1619 aa10.7□□□□□ -0.7
TUB1YML085C IRC20Q06554 1556 aa10.63□□□□□ -0.71
TUB1YML085C NUP170P38181 1502 aa10.63□□□□□ -0.71
TUB1YML085C CAT8P39113 1433 aa10.62□□□□□ -0.71
TUB1YML085C GEA1P47102 1408 aaPredicted RBP10.62□□□□□ -0.71
TUB1YML085C IFH1P39520 1085 aa10.62□□□□□ -0.71
TUB1YML085C BUD3P25558 1636 aa10.62□□□□□ -0.71
TUB1YML085C SPO14P36126 1683 aa10.61□□□□□ -0.71
TUB1YML085C GDB1Q06625 1536 aa10.6□□□□□ -0.71
TUB1YML085C BNI1P41832 1953 aa10.6□□□□□ -0.71
TUB1YML085C ITT1Q04638 464 aa10.59□□□□□ -0.71
TUB1YML085C NUP157P40064 1391 aaKnown RBP10.58□□□□□ -0.72
TUB1YML085C IQG1Q12280 1495 aa10.57□□□□□ -0.72
TUB1YML085C TRM3Q07527 1436 aa10.56□□□□□ -0.72
TUB1YML085C MMS1Q06211 1407 aa10.55□□□□□ -0.72
TUB1YML085C PDR10P51533 1564 aa10.53□□□□□ -0.72
TUB1YML085C DOP1Q03921 1698 aa10.5□□□□□ -0.73
TUB1YML085C YBT1P32386 1661 aa10.47□□□□□ -0.73
TUB1YML085C TY3B-GQ99315 1547 aa10.44□□□□□ -0.74
TUB1YML085C ARO1P08566 1588 aaKnown RBP10.41□□□□□ -0.74
TUB1YML085C ABP1P15891 592 aaKnown RBP10.4□□□□□ -0.74
TUB1YML085C CKB1P43639 278 aa10.4□□□□□ -0.74
TUB1YML085C IKI3Q06706 1349 aaKnown RBP10.4□□□□□ -0.74
TUB1YML085C SEC7P11075 2009 aaKnown RBP10.4□□□□□ -0.75
TUB1YML085C SRB8P25648 1427 aa10.39□□□□□ -0.75
TUB1YML085C DNF2Q12675 1612 aa10.38□□□□□ -0.75
TUB1YML085C CHC1P22137 1653 aaKnown RBP10.37□□□□□ -0.75
TUB1YML085C MIF2P35201 549 aa10.36□□□□□ -0.75
TUB1YML085C BNR1P40450 1375 aa10.35□□□□□ -0.75
TUB1YML085C YSP2Q06681 1438 aa10.35□□□□□ -0.75
TUB1YML085C URN1Q06525 465 aaKnown RBP10.32□□□□□ -0.76
TUB1YML085C BUD21Q08492 214 aaPredicted RBP10.28□□□□□ -0.76
TUB1YML085C FAP1P53971 965 aa10.22□□□□□ -0.77
TUB1YML085C YAP3P38749 330 aa10.21□□□□□ -0.78
TUB1YML085C YOR093CQ12275 1648 aa10.19□□□□□ -0.78
TUB1YML085C SSM4P40318 1319 aa10.15□□□□□ -0.78
TUB1YML085C HAP1P0CE41 1502 aa10.12□□□□□ -0.79
TUB1YML085C GCN2P15442 1659 aa10.11□□□□□ -0.79
TUB1YML085C DNF3Q12674 1656 aa10.11□□□□□ -0.79
TUB1YML085C NUP188P52593 1655 aaKnown RBP10.09□□□□□ -0.79
TUB1YML085C IPL1P38991 367 aa10.07□□□□□ -0.8
TUB1YML085C PDR5P33302 1511 aaKnown RBP10.06□□□□□ -0.8
TUB1YML085C PAF1P38351 445 aa10.05□□□□□ -0.8
TUB1YML085C MAK10Q02197 733 aa10.03□□□□□ -0.8
TUB1YML085C IML1P47170 1584 aa10.02□□□□□ -0.81
TUB1YML085C YFR006WP43590 535 aa9.99□□□□□ -0.81
TUB1YML085C VMR1P38735 1592 aa9.98□□□□□ -0.81
TUB1YML085C NOP7P53261 605 aaKnown RBP9.95□□□□□ -0.82
TUB1YML085C TYS1P36421 394 aaKnown RBP9.93□□□□□ -0.82
TUB1YML085C TY1B-NL2Q99337 1749 aaKnown RBP9.93□□□□□ -0.82
TUB1YML085C BFR2Q06631 534 aaKnown RBP9.92□□□□□ -0.82
TUB1YML085C RAV1P47104 1357 aa9.91□□□□□ -0.82
TUB1YML085C YMR196WQ04336 1088 aa9.91□□□□□ -0.82
TUB1YML085C RTC1Q08281 1341 aa9.87□□□□□ -0.83
TUB1YML085C PDR11P40550 1411 aa9.83□□□□□ -0.84
TUB1YML085C NAP1P25293 417 aaKnown RBP9.82□□□□□ -0.84
TUB1YML085C MRX12P47084 519 aa9.82□□□□□ -0.84
TUB1YML085C SCT1P32784 759 aa9.82□□□□□ -0.84
TUB1YML085C USO1P25386 1790 aa9.81□□□□□ -0.84
TUB1YML085C ESL2P36168 1195 aa9.79□□□□□ -0.84
TUB1YML085C BCK1Q01389 1478 aa9.78□□□□□ -0.84
TUB1YML085C CFT1Q06632 1357 aaKnown RBP9.77□□□□□ -0.85
TUB1YML085C ALD4P46367 519 aaKnown RBP9.76□□□□□ -0.85
TUB1YML085C THI12P42883 340 aa9.72□□□□□ -0.85
TUB1YML085C THI5P43534 340 aa9.72□□□□□ -0.85
TUB1YML085C THI11P47183 340 aa9.72□□□□□ -0.85
TUB1YML085C RIA1P53893 1110 aa9.72□□□□□ -0.85
TUB1YML085C THI13Q07748 340 aa9.72□□□□□ -0.85
TUB1YML085C KRE5P22023 1365 aa9.71□□□□□ -0.86
TUB1YML085C NUP192P47054 1683 aa9.71□□□□□ -0.86
TUB1YML085C CAB1Q04430 367 aa9.68□□□□□ -0.86
TUB1YML085C YNR029CP53729 429 aaKnown RBP9.67□□□□□ -0.86
TUB1YML085C RAD9P14737 1309 aa9.67□□□□□ -0.86
TUB1YML085C TAF5P38129 798 aa9.65□□□□□ -0.86
TUB1YML085C PRY3P47033 881 aa9.62□□□□□ -0.87
TUB1YML085C TAF8Q03750 510 aa9.61□□□□□ -0.87
TUB1YML085C TY3B-IQ7LHG5 1498 aaKnown RBP9.6□□□□□ -0.87
TUB1YML085C SPE2P21182 396 aa9.57□□□□□ -0.88
TUB1YML085C KIP3P53086 805 aaKnown RBP9.57□□□□□ -0.88
TUB1YML085C POL5P39985 1022 aaKnown RBP9.54□□□□□ -0.88
TUB1YML085C CPS1P27614 576 aa9.53□□□□□ -0.88
TUB1YML085C PTP3P40048 928 aa9.52□□□□□ -0.89
TUB1YML085C PSK1P31374 1356 aa9.51□□□□□ -0.89
TUB1YML085C YAH1Q12184 172 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms