RNA–Protein interactions for RNA: YML031W

NDC1, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene NDC1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC1YML031W TY1B-NL1Q12112 1755 aa8.73□□□□□ -1.01
NDC1YML031W TY1B-GR1Q12141 1755 aa8.73□□□□□ -1.01
NDC1YML031W TY1B-BLQ12490 1755 aa8.73□□□□□ -1.01
NDC1YML031W DRS2P39524 1355 aa8.72□□□□□ -1.01
NDC1YML031W NTE1Q04958 1679 aa8.71□□□□□ -1.01
NDC1YML031W TSC11P40061 1430 aa8.7□□□□□ -1.02
NDC1YML031W VTH1P40438 1549 aa8.69□□□□□ -1.02
NDC1YML031W VTH2P40890 1549 aa8.69□□□□□ -1.02
NDC1YML031W RPO21P04050 1733 aaKnown RBP8.67□□□□□ -1.02
NDC1YML031W YFR006WP43590 535 aa8.64□□□□□ -1.03
NDC1YML031W IRC20Q06554 1556 aa8.63□□□□□ -1.03
NDC1YML031W MYO4P32492 1471 aa8.63□□□□□ -1.03
NDC1YML031W DNF2Q12675 1612 aa8.58□□□□□ -1.04
NDC1YML031W SNT2P53127 1403 aa8.58□□□□□ -1.04
NDC1YML031W NUP170P38181 1502 aa8.57□□□□□ -1.04
NDC1YML031W SNQ2P32568 1501 aaKnown RBP8.56□□□□□ -1.04
NDC1YML031W YTA7P40340 1379 aa8.52□□□□□ -1.04
NDC1YML031W MET10P39692 1035 aa8.52□□□□□ -1.05
NDC1YML031W SPO14P36126 1683 aa8.52□□□□□ -1.05
NDC1YML031W ULS1Q08562 1619 aa8.51□□□□□ -1.05
NDC1YML031W STH1P32597 1359 aa8.5□□□□□ -1.05
NDC1YML031W PDR12Q02785 1511 aa8.47□□□□□ -1.05
NDC1YML031W RTT106P40161 455 aa8.44□□□□□ -1.06
NDC1YML031W DOP1Q03921 1698 aa8.44□□□□□ -1.06
NDC1YML031W MLP2P40457 1679 aa8.42□□□□□ -1.06
NDC1YML031W TRM3Q07527 1436 aa8.42□□□□□ -1.06
NDC1YML031W IQG1Q12280 1495 aa8.42□□□□□ -1.06
NDC1YML031W GDB1Q06625 1536 aa8.4□□□□□ -1.06
NDC1YML031W PDR10P51533 1564 aa8.4□□□□□ -1.07
NDC1YML031W YOR093CQ12275 1648 aa8.4□□□□□ -1.07
NDC1YML031W NUP157P40064 1391 aaKnown RBP8.38□□□□□ -1.07
NDC1YML031W BUD3P25558 1636 aa8.36□□□□□ -1.07
NDC1YML031W PDR15Q04182 1529 aaKnown RBP8.31□□□□□ -1.08
NDC1YML031W CHC1P22137 1653 aaKnown RBP8.29□□□□□ -1.08
NDC1YML031W ARO1P08566 1588 aaKnown RBP8.28□□□□□ -1.08
NDC1YML031W SAS10Q12136 610 aaPredicted RBP8.24□□□□□ -1.09
NDC1YML031W DNF3Q12674 1656 aa8.23□□□□□ -1.09
NDC1YML031W TAF7Q05021 590 aa8.22□□□□□ -1.09
NDC1YML031W SEC7P11075 2009 aaKnown RBP8.22□□□□□ -1.09
NDC1YML031W CAT8P39113 1433 aa8.18□□□□□ -1.1
NDC1YML031W IFH1P39520 1085 aa8.18□□□□□ -1.1
NDC1YML031W YAP3P38749 330 aa8.16□□□□□ -1.1
NDC1YML031W YBT1P32386 1661 aa8.14□□□□□ -1.11
NDC1YML031W GEA1P47102 1408 aaPredicted RBP8.13□□□□□ -1.11
NDC1YML031W TY3B-GQ99315 1547 aa8.13□□□□□ -1.11
NDC1YML031W YSP2Q06681 1438 aa8.12□□□□□ -1.11
NDC1YML031W BNR1P40450 1375 aa8.11□□□□□ -1.11
NDC1YML031W CKB1P43639 278 aa8.1□□□□□ -1.11
NDC1YML031W MAK10Q02197 733 aa8.1□□□□□ -1.11
NDC1YML031W URN1Q06525 465 aaKnown RBP8.06□□□□□ -1.12
NDC1YML031W USO1P25386 1790 aa8.04□□□□□ -1.12
NDC1YML031W SRB8P25648 1427 aa7.96□□□□□ -1.14
NDC1YML031W HAP1P0CE41 1502 aa7.95□□□□□ -1.14
NDC1YML031W FAP1P53971 965 aa7.95□□□□□ -1.14
NDC1YML031W IML1P47170 1584 aa7.94□□□□□ -1.14
NDC1YML031W IPL1P38991 367 aa7.93□□□□□ -1.14
NDC1YML031W TY1B-NL2Q99337 1749 aaKnown RBP7.93□□□□□ -1.14
NDC1YML031W YMR196WQ04336 1088 aa7.93□□□□□ -1.14
NDC1YML031W NUP188P52593 1655 aaKnown RBP7.92□□□□□ -1.14
NDC1YML031W THI12P42883 340 aa7.9□□□□□ -1.14
NDC1YML031W THI5P43534 340 aa7.9□□□□□ -1.14
NDC1YML031W THI11P47183 340 aa7.9□□□□□ -1.14
NDC1YML031W THI13Q07748 340 aa7.9□□□□□ -1.14
NDC1YML031W BUD21Q08492 214 aaPredicted RBP7.88□□□□□ -1.15
NDC1YML031W VMR1P38735 1592 aa7.88□□□□□ -1.15
NDC1YML031W TYS1P36421 394 aaKnown RBP7.87□□□□□ -1.15
NDC1YML031W PDR5P33302 1511 aaKnown RBP7.79□□□□□ -1.16
NDC1YML031W YAH1Q12184 172 aaKnown RBP7.76□□□□□ -1.17
NDC1YML031W GLN1P32288 370 aaKnown RBP7.71□□□□□ -1.17
NDC1YML031W KRE5P22023 1365 aa7.68□□□□□ -1.18
NDC1YML031W CFT1Q06632 1357 aaKnown RBP7.68□□□□□ -1.18
NDC1YML031W PTP3P40048 928 aa7.68□□□□□ -1.18
NDC1YML031W YIL055CP40523 627 aaKnown RBP7.68□□□□□ -1.18
NDC1YML031W APP1P53933 587 aa7.68□□□□□ -1.18
NDC1YML031W PDR11P40550 1411 aa7.66□□□□□ -1.18
NDC1YML031W MRX12P47084 519 aa7.66□□□□□ -1.18
NDC1YML031W RIA1P53893 1110 aa7.66□□□□□ -1.18
NDC1YML031W IKI3Q06706 1349 aaKnown RBP7.66□□□□□ -1.18
NDC1YML031W YNR029CP53729 429 aaKnown RBP7.64□□□□□ -1.19
NDC1YML031W GCN2P15442 1659 aa7.64□□□□□ -1.19
NDC1YML031W BCK1Q01389 1478 aa7.63□□□□□ -1.19
NDC1YML031W SSM4P40318 1319 aa7.6□□□□□ -1.19
NDC1YML031W REB1P21538 810 aa7.58□□□□□ -1.2
NDC1YML031W NUP192P47054 1683 aa7.57□□□□□ -1.2
NDC1YML031W YMR074CQ04773 145 aa7.57□□□□□ -1.2
NDC1YML031W PRI1P10363 409 aa7.57□□□□□ -1.2
NDC1YML031W ENT1Q12518 454 aa7.55□□□□□ -1.2
NDC1YML031W RAV1P47104 1357 aa7.55□□□□□ -1.2
NDC1YML031W CAB1Q04430 367 aa7.54□□□□□ -1.2
NDC1YML031W PAF1P38351 445 aa7.53□□□□□ -1.2
NDC1YML031W ENV9Q08651 330 aa7.53□□□□□ -1.2
NDC1YML031W TY3B-IQ7LHG5 1498 aaKnown RBP7.52□□□□□ -1.21
NDC1YML031W PRY3P47033 881 aa7.52□□□□□ -1.21
NDC1YML031W RAD9P14737 1309 aa7.52□□□□□ -1.21
NDC1YML031W ALD4P46367 519 aaKnown RBP7.51□□□□□ -1.21
NDC1YML031W IMH1Q06704 911 aaKnown RBP7.5□□□□□ -1.21
NDC1YML031W YRF1-2P40105 1681 aa7.49□□□□□ -1.21
NDC1YML031W RTC1Q08281 1341 aa7.48□□□□□ -1.21
NDC1YML031W RRP5Q05022 1729 aaKnown RBP7.48□□□□□ -1.21
NDC1YML031W BFR2Q06631 534 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms