RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W JIP4Q03361 876 aa7.96□□□□□ -1.14
YLR400WYLR400W GRE2Q12068 342 aaKnown RBP7.94□□□□□ -1.14
YLR400WYLR400W COQ8P27697 501 aa7.93□□□□□ -1.14
YLR400WYLR400W PTC3P34221 468 aaKnown RBP7.93□□□□□ -1.14
YLR400WYLR400W PTC4P38089 393 aa7.93□□□□□ -1.14
YLR400WYLR400W YEL023CP39992 682 aa7.91□□□□□ -1.14
YLR400WYLR400W TFG1P41895 735 aaPredicted RBP7.9□□□□□ -1.14
YLR400WYLR400W GUT1P32190 709 aa7.88□□□□□ -1.15
YLR400WYLR400W ATH1P48016 1211 aa7.88□□□□□ -1.15
YLR400WYLR400W YDL129WQ07555 291 aa7.84□□□□□ -1.15
YLR400WYLR400W SAP30P38429 201 aa7.83□□□□□ -1.16
YLR400WYLR400W NST1P53935 1240 aa7.83□□□□□ -1.16
YLR400WYLR400W SOL3P38858 249 aa7.82□□□□□ -1.16
YLR400WYLR400W NOP53Q12080 455 aaKnown RBP7.82□□□□□ -1.16
YLR400WYLR400W PML39Q03760 334 aa7.77□□□□□ -1.17
YLR400WYLR400W MPH3P0CE00 602 aa7.73□□□□□ -1.17
YLR400WYLR400W CHL1P22516 861 aaPredicted RBP7.72□□□□□ -1.17
YLR400WYLR400W PRE3P38624 215 aa7.72□□□□□ -1.17
YLR400WYLR400W AI4P03878 556 aa7.71□□□□□ -1.18
YLR400WYLR400W YGR273CP53329 174 aa7.71□□□□□ -1.18
YLR400WYLR400W SET1P38827 1080 aaKnown RBP7.7□□□□□ -1.18
YLR400WYLR400W MID1P41821 548 aa7.7□□□□□ -1.18
YLR400WYLR400W YDR344CQ05510 147 aa7.7□□□□□ -1.18
YLR400WYLR400W ILV3P39522 585 aaKnown RBP7.68□□□□□ -1.18
YLR400WYLR400W BCK2P33306 851 aa7.62□□□□□ -1.19
YLR400WYLR400W ARH1P48360 493 aa7.62□□□□□ -1.19
YLR400WYLR400W ELP4Q02884 456 aaKnown RBP7.62□□□□□ -1.19
YLR400WYLR400W PEX29Q03370 554 aa7.58□□□□□ -1.2
YLR400WYLR400W SLI15P38283 698 aa7.57□□□□□ -1.2
YLR400WYLR400W KEX1P09620 729 aa7.56□□□□□ -1.2
YLR400WYLR400W UBP14P38237 781 aaKnown RBP7.55□□□□□ -1.2
YLR400WYLR400W VRP1P37370 817 aa7.54□□□□□ -1.2
YLR400WYLR400W MPC54Q08550 464 aa7.54□□□□□ -1.2
YLR400WYLR400W SPT23P35210 1082 aa7.53□□□□□ -1.2
YLR400WYLR400W HAP5Q02516 242 aa7.53□□□□□ -1.2
YLR400WYLR400W YLR326WQ06170 240 aaKnown RBP7.52□□□□□ -1.21
YLR400WYLR400W NMA111P53920 997 aa7.51□□□□□ -1.21
YLR400WYLR400W VHR2P40041 505 aa7.5□□□□□ -1.21
YLR400WYLR400W XDJ1P39102 459 aa7.49□□□□□ -1.21
YLR400WYLR400W DPL1Q05567 589 aa7.49□□□□□ -1.21
YLR400WYLR400W IFH1P39520 1085 aa7.48□□□□□ -1.21
YLR400WYLR400W BNI4P53858 892 aa7.48□□□□□ -1.21
YLR400WYLR400W PCS60P38137 543 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
YLR400WYLR400W YPR148CQ06523 435 aa7.46□□□□□ -1.22
YLR400WYLR400W YML082WQ04533 649 aaKnown RBP7.45□□□□□ -1.22
YLR400WYLR400W CDC73Q06697 393 aa7.45□□□□□ -1.22
YLR400WYLR400W PTC2P39966 464 aaKnown RBP7.43□□□□□ -1.22
YLR400WYLR400W YDR090CQ03193 310 aa7.43□□□□□ -1.22
YLR400WYLR400W ISU2Q12056 156 aa7.43□□□□□ -1.22
YLR400WYLR400W RAD54P32863 898 aa7.42□□□□□ -1.22
YLR400WYLR400W REF2P42073 533 aaPredicted RBP7.39□□□□□ -1.23
YLR400WYLR400W VPS70P47161 811 aa7.38□□□□□ -1.23
YLR400WYLR400W RAM1P22007 431 aa7.36□□□□□ -1.23
YLR400WYLR400W YPR015CQ12531 247 aa7.35□□□□□ -1.23
YLR400WYLR400W KIC1P38692 1080 aa7.33□□□□□ -1.24
YLR400WYLR400W RPP1BP10622 106 aaKnown RBP7.32□□□□□ -1.24
YLR400WYLR400W PDR1P12383 1068 aa7.32□□□□□ -1.24
YLR400WYLR400W COX6P00427 148 aa7.3□□□□□ -1.24
YLR400WYLR400W GAP1P19145 602 aaPredicted RBP7.3□□□□□ -1.24
YLR400WYLR400W DPS1P04802 557 aaKnown RBP7.29□□□□□ -1.24
YLR400WYLR400W DMA1P38823 416 aa7.27□□□□□ -1.25
YLR400WYLR400W MAK21Q12176 1025 aaKnown RBP7.26□□□□□ -1.25
YLR400WYLR400W CSC1Q06538 782 aa7.25□□□□□ -1.25
YLR400WYLR400W ORC6P38826 435 aa7.24□□□□□ -1.25
YLR400WYLR400W PEX21P50091 288 aa7.24□□□□□ -1.25
YLR400WYLR400W YRR1Q12172 810 aa7.24□□□□□ -1.25
YLR400WYLR400W CKB1P43639 278 aa7.23□□□□□ -1.25
YLR400WYLR400W TFB4Q12004 338 aa7.23□□□□□ -1.25
YLR400WYLR400W GYP1Q08484 637 aa7.22□□□□□ -1.25
YLR400WYLR400W TUM1Q08686 304 aaKnown RBP7.21□□□□□ -1.26
YLR400WYLR400W BUD20Q08004 166 aaPredicted RBP7.2□□□□□ -1.26
YLR400WYLR400W PBS2P08018 668 aa7.19□□□□□ -1.26
YLR400WYLR400W MVP1P40959 511 aaKnown RBP7.19□□□□□ -1.26
YLR400WYLR400W SAS10Q12136 610 aaPredicted RBP7.19□□□□□ -1.26
YLR400WYLR400W RAS1P01119 309 aa7.18□□□□□ -1.26
YLR400WYLR400W SAS4Q04003 481 aa7.18□□□□□ -1.26
YLR400WYLR400W RGR1P19263 1082 aa7.17□□□□□ -1.26
YLR400WYLR400W STR2P47164 639 aa7.16□□□□□ -1.26
YLR400WYLR400W ISM1P48526 1002 aa7.16□□□□□ -1.26
YLR400WYLR400W SDH2P21801 266 aa7.15□□□□□ -1.26
YLR400WYLR400W NUD1P32336 851 aa7.14□□□□□ -1.27
YLR400WYLR400W YPR109WQ06104 294 aa7.14□□□□□ -1.27
YLR400WYLR400W PRT1P06103 763 aaKnown RBP7.13□□□□□ -1.27
YLR400WYLR400W SRC1Q03707 834 aa7.12□□□□□ -1.27
YLR400WYLR400W AMS1P22855 1083 aa7.1□□□□□ -1.27
YLR400WYLR400W NPL4P33755 580 aa7.09□□□□□ -1.27
YLR400WYLR400W GCD11P32481 527 aaKnown RBP7.08□□□□□ -1.28
YLR400WYLR400W DSF2P38213 736 aa7.08□□□□□ -1.28
YLR400WYLR400W MAM3Q12296 706 aa7.08□□□□□ -1.28
YLR400WYLR400W SEC2P17065 759 aa7.07□□□□□ -1.28
YLR400WYLR400W MRF1P30775 413 aaPredicted RBP7.07□□□□□ -1.28
YLR400WYLR400W PSE1P32337 1089 aaKnown RBP7.07□□□□□ -1.28
YLR400WYLR400W TY1A-DR4O74302 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-HP0C2I4 478 aaKnown RBP7.06□□□□□ -1.28
YLR400WYLR400W TY1A-AP0CX57 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-PR1P0CX58 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-ORP0CX59 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-PR2P0CX60 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-DR5P0CX65 440 aa7.06□□□□□ -1.28
YLR400WYLR400W TY1A-ER2P0CX66 440 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms