RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W TY1B-DR3Q99231 1755 aa9.53□□□□□ -0.88
SEC13YLR208W PRI1P10363 409 aa9.53□□□□□ -0.88
SEC13YLR208W DNF2Q12675 1612 aa9.49□□□□□ -0.89
SEC13YLR208W RPG1P38249 964 aaKnown RBP9.44□□□□□ -0.9
SEC13YLR208W AAD16Q02895 342 aa9.44□□□□□ -0.9
SEC13YLR208W SPP41P38904 1435 aa9.41□□□□□ -0.9
SEC13YLR208W NTE1Q04958 1679 aa9.4□□□□□ -0.9
SEC13YLR208W TY1B-JR2P47100 1755 aaKnown RBP9.37□□□□□ -0.91
SEC13YLR208W TY1B-ER2Q03619 1755 aa9.37□□□□□ -0.91
SEC13YLR208W TY1B-MR1Q04214 1755 aa9.37□□□□□ -0.91
SEC13YLR208W TY1B-MR2Q04670 1755 aaKnown RBP9.37□□□□□ -0.91
SEC13YLR208W TY1B-LR1Q12088 1755 aaKnown RBP9.37□□□□□ -0.91
SEC13YLR208W TY1B-NL1Q12112 1755 aa9.37□□□□□ -0.91
SEC13YLR208W TY1B-GR1Q12141 1755 aa9.37□□□□□ -0.91
SEC13YLR208W TY1B-BLQ12490 1755 aa9.37□□□□□ -0.91
SEC13YLR208W POL1P13382 1468 aa9.36□□□□□ -0.91
SEC13YLR208W SMC4Q12267 1418 aa9.36□□□□□ -0.91
SEC13YLR208W TSC11P40061 1430 aa9.35□□□□□ -0.91
SEC13YLR208W YOR093CQ12275 1648 aa9.34□□□□□ -0.91
SEC13YLR208W VTH1P40438 1549 aa9.34□□□□□ -0.91
SEC13YLR208W VTH2P40890 1549 aa9.34□□□□□ -0.91
SEC13YLR208W YOR1P53049 1477 aa9.34□□□□□ -0.91
SEC13YLR208W RPO21P04050 1733 aaKnown RBP9.34□□□□□ -0.92
SEC13YLR208W NUP170P38181 1502 aa9.32□□□□□ -0.92
SEC13YLR208W SNT2P53127 1403 aa9.27□□□□□ -0.93
SEC13YLR208W STU1P38198 1513 aa9.26□□□□□ -0.93
SEC13YLR208W SPO14P36126 1683 aa9.25□□□□□ -0.93
SEC13YLR208W TAF7Q05021 590 aa9.24□□□□□ -0.93
SEC13YLR208W DOP1Q03921 1698 aa9.23□□□□□ -0.93
SEC13YLR208W MYO4P32492 1471 aa9.21□□□□□ -0.93
SEC13YLR208W ULS1Q08562 1619 aa9.2□□□□□ -0.94
SEC13YLR208W SNQ2P32568 1501 aaKnown RBP9.19□□□□□ -0.94
SEC13YLR208W HAA1Q12753 694 aaKnown RBP9.15□□□□□ -0.94
SEC13YLR208W MET10P39692 1035 aa9.13□□□□□ -0.95
SEC13YLR208W TRM3Q07527 1436 aa9.12□□□□□ -0.95
SEC13YLR208W PDR12Q02785 1511 aa9.1□□□□□ -0.95
SEC13YLR208W IQG1Q12280 1495 aa9.08□□□□□ -0.96
SEC13YLR208W PDR10P51533 1564 aa9.07□□□□□ -0.96
SEC13YLR208W GDB1Q06625 1536 aa9.05□□□□□ -0.96
SEC13YLR208W PDR15Q04182 1529 aaKnown RBP9.04□□□□□ -0.96
SEC13YLR208W TSR3Q12094 313 aaKnown RBP9.03□□□□□ -0.96
SEC13YLR208W RPL17AP05740 184 aaKnown RBP9.02□□□□□ -0.97
SEC13YLR208W RPL17BP46990 184 aaKnown RBP9.02□□□□□ -0.97
SEC13YLR208W ARO1P08566 1588 aaKnown RBP9.02□□□□□ -0.97
SEC13YLR208W NUP157P40064 1391 aaKnown RBP9□□□□□ -0.97
SEC13YLR208W DNF3Q12674 1656 aa9□□□□□ -0.97
SEC13YLR208W YTA7P40340 1379 aa8.99□□□□□ -0.97
SEC13YLR208W STH1P32597 1359 aa8.98□□□□□ -0.97
SEC13YLR208W REB1P21538 810 aa8.96□□□□□ -0.98
SEC13YLR208W RTT106P40161 455 aa8.95□□□□□ -0.98
SEC13YLR208W BUD3P25558 1636 aa8.94□□□□□ -0.98
SEC13YLR208W CHC1P22137 1653 aaKnown RBP8.93□□□□□ -0.98
SEC13YLR208W MLP2P40457 1679 aa8.9□□□□□ -0.98
SEC13YLR208W TY3B-GQ99315 1547 aa8.82□□□□□ -1
SEC13YLR208W YAP3P38749 330 aa8.82□□□□□ -1
SEC13YLR208W MAK10Q02197 733 aa8.82□□□□□ -1
SEC13YLR208W YSP2Q06681 1438 aa8.8□□□□□ -1
SEC13YLR208W BNR1P40450 1375 aa8.74□□□□□ -1.01
SEC13YLR208W MRPL32P25348 183 aa8.73□□□□□ -1.01
SEC13YLR208W USO1P25386 1790 aa8.72□□□□□ -1.01
SEC13YLR208W THI12P42883 340 aa8.66□□□□□ -1.02
SEC13YLR208W THI5P43534 340 aa8.66□□□□□ -1.02
SEC13YLR208W THI11P47183 340 aa8.66□□□□□ -1.02
SEC13YLR208W THI13Q07748 340 aa8.66□□□□□ -1.02
SEC13YLR208W SEC7P11075 2009 aaKnown RBP8.64□□□□□ -1.03
SEC13YLR208W GLN1P32288 370 aaKnown RBP8.64□□□□□ -1.03
SEC13YLR208W SPT21P35209 758 aa8.63□□□□□ -1.03
SEC13YLR208W CAT8P39113 1433 aa8.61□□□□□ -1.03
SEC13YLR208W YMR196WQ04336 1088 aa8.59□□□□□ -1.03
SEC13YLR208W IML1P47170 1584 aa8.58□□□□□ -1.04
SEC13YLR208W YBT1P32386 1661 aa8.57□□□□□ -1.04
SEC13YLR208W IFH1P39520 1085 aa8.57□□□□□ -1.04
SEC13YLR208W BUD31P25337 157 aaPredicted RBP8.55□□□□□ -1.04
SEC13YLR208W CKB1P43639 278 aa8.55□□□□□ -1.04
SEC13YLR208W URN1Q06525 465 aaKnown RBP8.55□□□□□ -1.04
SEC13YLR208W NUP188P52593 1655 aaKnown RBP8.54□□□□□ -1.04
SEC13YLR208W SAS10Q12136 610 aaPredicted RBP8.54□□□□□ -1.04
SEC13YLR208W TY1B-NL2Q99337 1749 aaKnown RBP8.54□□□□□ -1.04
SEC13YLR208W HAP1P0CE41 1502 aa8.54□□□□□ -1.04
SEC13YLR208W YAH1Q12184 172 aaKnown RBP8.53□□□□□ -1.04
SEC13YLR208W GEA1P47102 1408 aaPredicted RBP8.51□□□□□ -1.05
SEC13YLR208W VMR1P38735 1592 aa8.49□□□□□ -1.05
SEC13YLR208W IPL1P38991 367 aa8.49□□□□□ -1.05
SEC13YLR208W RIM101P33400 625 aa8.48□□□□□ -1.05
SEC13YLR208W YIL055CP40523 627 aaKnown RBP8.48□□□□□ -1.05
SEC13YLR208W APP1P53933 587 aa8.48□□□□□ -1.05
SEC13YLR208W TYS1P36421 394 aaKnown RBP8.45□□□□□ -1.06
SEC13YLR208W LEO1P38439 464 aa8.44□□□□□ -1.06
SEC13YLR208W DMA1P38823 416 aa8.44□□□□□ -1.06
SEC13YLR208W YKR023WP36119 530 aaKnown RBP8.42□□□□□ -1.06
SEC13YLR208W PTP3P40048 928 aa8.37□□□□□ -1.07
SEC13YLR208W YMR074CQ04773 145 aa8.35□□□□□ -1.07
SEC13YLR208W BCK1Q01389 1478 aa8.33□□□□□ -1.08
SEC13YLR208W SRB8P25648 1427 aa8.33□□□□□ -1.08
SEC13YLR208W PDR5P33302 1511 aaKnown RBP8.33□□□□□ -1.08
SEC13YLR208W CDC27P38042 758 aa8.31□□□□□ -1.08
SEC13YLR208W PDR11P40550 1411 aa8.29□□□□□ -1.08
SEC13YLR208W TFC8Q12308 588 aa8.27□□□□□ -1.09
SEC13YLR208W HOP09932 586 aa8.26□□□□□ -1.09
SEC13YLR208W KRE5P22023 1365 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms