RNA–Protein interactions for RNA: YLR110C

CCW12, Transcript of Cell wall mannoprotein, yeastyeast

Gene CCW12, Length 402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCW12YLR110C MET5P47169 1442 aa10.91□□□□□ -0.66
CCW12YLR110C SNT2P53127 1403 aa10.9□□□□□ -0.66
CCW12YLR110C NTE1Q04958 1679 aa10.89□□□□□ -0.67
CCW12YLR110C PDR15Q04182 1529 aaKnown RBP10.88□□□□□ -0.67
CCW12YLR110C NUP159P40477 1460 aa10.87□□□□□ -0.67
CCW12YLR110C ULS1Q08562 1619 aa10.87□□□□□ -0.67
CCW12YLR110C RPO21P04050 1733 aaKnown RBP10.87□□□□□ -0.67
CCW12YLR110C IFH1P39520 1085 aa10.81□□□□□ -0.68
CCW12YLR110C RTT106P40161 455 aa10.8□□□□□ -0.68
CCW12YLR110C GEA2P39993 1459 aaKnown RBP10.78□□□□□ -0.68
CCW12YLR110C YRF1-1P0CX20 1796 aa10.77□□□□□ -0.68
CCW12YLR110C YRF1-5P0CX21 1796 aa10.77□□□□□ -0.68
CCW12YLR110C YRF1-8P0CX22 1796 aa10.77□□□□□ -0.68
CCW12YLR110C GEA1P47102 1408 aaPredicted RBP10.77□□□□□ -0.68
CCW12YLR110C MET10P39692 1035 aa10.72□□□□□ -0.69
CCW12YLR110C VPS15P22219 1454 aa10.72□□□□□ -0.69
CCW12YLR110C IRC20Q06554 1556 aa10.72□□□□□ -0.69
CCW12YLR110C LTE1P07866 1435 aa10.69□□□□□ -0.7
CCW12YLR110C PDR12Q02785 1511 aa10.68□□□□□ -0.7
CCW12YLR110C TY3B-GQ99315 1547 aa10.68□□□□□ -0.7
CCW12YLR110C SPO14P36126 1683 aa10.66□□□□□ -0.7
CCW12YLR110C CAT8P39113 1433 aa10.65□□□□□ -0.7
CCW12YLR110C GDB1Q06625 1536 aa10.63□□□□□ -0.71
CCW12YLR110C IKI3Q06706 1349 aaKnown RBP10.62□□□□□ -0.71
CCW12YLR110C NUP157P40064 1391 aaKnown RBP10.62□□□□□ -0.71
CCW12YLR110C YBT1P32386 1661 aa10.61□□□□□ -0.71
CCW12YLR110C PDR10P51533 1564 aa10.6□□□□□ -0.71
CCW12YLR110C NUP170P38181 1502 aa10.56□□□□□ -0.72
CCW12YLR110C IQG1Q12280 1495 aa10.54□□□□□ -0.72
CCW12YLR110C DRS2P39524 1355 aa10.52□□□□□ -0.72
CCW12YLR110C ARO1P08566 1588 aaKnown RBP10.52□□□□□ -0.72
CCW12YLR110C CKB1P43639 278 aa10.5□□□□□ -0.73
CCW12YLR110C BUD3P25558 1636 aa10.49□□□□□ -0.73
CCW12YLR110C SSM4P40318 1319 aa10.49□□□□□ -0.73
CCW12YLR110C BNI1P41832 1953 aa10.48□□□□□ -0.73
CCW12YLR110C ITT1Q04638 464 aa10.48□□□□□ -0.73
CCW12YLR110C SRB8P25648 1427 aa10.47□□□□□ -0.73
CCW12YLR110C YSP2Q06681 1438 aa10.44□□□□□ -0.74
CCW12YLR110C TRM3Q07527 1436 aa10.42□□□□□ -0.74
CCW12YLR110C DOP1Q03921 1698 aa10.41□□□□□ -0.74
CCW12YLR110C SEC7P11075 2009 aaKnown RBP10.4□□□□□ -0.75
CCW12YLR110C MMS1Q06211 1407 aa10.38□□□□□ -0.75
CCW12YLR110C BNR1P40450 1375 aa10.37□□□□□ -0.75
CCW12YLR110C BUD21Q08492 214 aaPredicted RBP10.35□□□□□ -0.75
CCW12YLR110C CHC1P22137 1653 aaKnown RBP10.33□□□□□ -0.76
CCW12YLR110C DNF2Q12675 1612 aa10.24□□□□□ -0.77
CCW12YLR110C GCN2P15442 1659 aa10.24□□□□□ -0.77
CCW12YLR110C YOR093CQ12275 1648 aa10.15□□□□□ -0.78
CCW12YLR110C ABP1P15891 592 aaKnown RBP10.14□□□□□ -0.79
CCW12YLR110C NUP188P52593 1655 aaKnown RBP10.14□□□□□ -0.79
CCW12YLR110C PDR5P33302 1511 aaKnown RBP10.13□□□□□ -0.79
CCW12YLR110C URN1Q06525 465 aaKnown RBP10.13□□□□□ -0.79
CCW12YLR110C VMR1P38735 1592 aa10.12□□□□□ -0.79
CCW12YLR110C YAP3P38749 330 aa10.1□□□□□ -0.79
CCW12YLR110C PAF1P38351 445 aa10.09□□□□□ -0.79
CCW12YLR110C IML1P47170 1584 aa10.08□□□□□ -0.8
CCW12YLR110C IPL1P38991 367 aa10.07□□□□□ -0.8
CCW12YLR110C NOP7P53261 605 aaKnown RBP10.07□□□□□ -0.8
CCW12YLR110C PDR11P40550 1411 aa10.06□□□□□ -0.8
CCW12YLR110C TYS1P36421 394 aaKnown RBP10.03□□□□□ -0.8
CCW12YLR110C BFR2Q06631 534 aaKnown RBP10.03□□□□□ -0.8
CCW12YLR110C RAV1P47104 1357 aa10.02□□□□□ -0.8
CCW12YLR110C DNF3Q12674 1656 aa10.02□□□□□ -0.81
CCW12YLR110C RTC1Q08281 1341 aa9.98□□□□□ -0.81
CCW12YLR110C HAP1P0CE41 1502 aa9.97□□□□□ -0.81
CCW12YLR110C MAK10Q02197 733 aa9.92□□□□□ -0.82
CCW12YLR110C MIF2P35201 549 aa9.91□□□□□ -0.82
CCW12YLR110C NUP192P47054 1683 aa9.88□□□□□ -0.83
CCW12YLR110C ESL2P36168 1195 aa9.85□□□□□ -0.83
CCW12YLR110C TAF5P38129 798 aa9.85□□□□□ -0.83
CCW12YLR110C POL5P39985 1022 aaKnown RBP9.85□□□□□ -0.83
CCW12YLR110C BCK1Q01389 1478 aa9.83□□□□□ -0.84
CCW12YLR110C ALD4P46367 519 aaKnown RBP9.82□□□□□ -0.84
CCW12YLR110C RAD9P14737 1309 aa9.82□□□□□ -0.84
CCW12YLR110C TY3B-IQ7LHG5 1498 aaKnown RBP9.81□□□□□ -0.84
CCW12YLR110C MRX12P47084 519 aa9.79□□□□□ -0.84
CCW12YLR110C CAB1Q04430 367 aa9.79□□□□□ -0.84
CCW12YLR110C KRE5P22023 1365 aa9.78□□□□□ -0.84
CCW12YLR110C ORC1P54784 914 aaPredicted RBP9.78□□□□□ -0.84
CCW12YLR110C USO1P25386 1790 aa9.76□□□□□ -0.85
CCW12YLR110C KIP3P53086 805 aaKnown RBP9.76□□□□□ -0.85
CCW12YLR110C TY1B-NL2Q99337 1749 aaKnown RBP9.76□□□□□ -0.85
CCW12YLR110C CFT1Q06632 1357 aaKnown RBP9.75□□□□□ -0.85
CCW12YLR110C RIA1P53893 1110 aa9.75□□□□□ -0.85
CCW12YLR110C TAF8Q03750 510 aa9.75□□□□□ -0.85
CCW12YLR110C NAP1P25293 417 aaKnown RBP9.74□□□□□ -0.85
CCW12YLR110C YLR419WQ06698 1435 aaKnown RBP9.73□□□□□ -0.85
CCW12YLR110C SPE2P21182 396 aa9.72□□□□□ -0.85
CCW12YLR110C YMR196WQ04336 1088 aa9.7□□□□□ -0.86
CCW12YLR110C SCT1P32784 759 aa9.69□□□□□ -0.86
CCW12YLR110C MHP1P43638 1398 aa9.68□□□□□ -0.86
CCW12YLR110C YNR029CP53729 429 aaKnown RBP9.68□□□□□ -0.86
CCW12YLR110C THI12P42883 340 aa9.64□□□□□ -0.87
CCW12YLR110C THI5P43534 340 aa9.64□□□□□ -0.87
CCW12YLR110C THI11P47183 340 aa9.64□□□□□ -0.87
CCW12YLR110C THI13Q07748 340 aa9.64□□□□□ -0.87
CCW12YLR110C YFR006WP43590 535 aa9.63□□□□□ -0.87
CCW12YLR110C CHZ1P40019 153 aaPredicted RBP9.62□□□□□ -0.87
CCW12YLR110C RCM1P53972 490 aa9.61□□□□□ -0.87
CCW12YLR110C PDS5Q04264 1277 aa9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms