RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C GRE2Q12068 342 aaKnown RBP9.12□□□□□ -0.95
NYV1YLR093C MIF2P35201 549 aa9.1□□□□□ -0.95
NYV1YLR093C PTC4P38089 393 aa9.1□□□□□ -0.95
NYV1YLR093C YEL023CP39992 682 aa9.1□□□□□ -0.95
NYV1YLR093C EDS1P38073 919 aa9.09□□□□□ -0.95
NYV1YLR093C PTC3P34221 468 aaKnown RBP9.08□□□□□ -0.96
NYV1YLR093C YDL129WQ07555 291 aa9.07□□□□□ -0.96
NYV1YLR093C COQ8P27697 501 aa9.06□□□□□ -0.96
NYV1YLR093C GUT1P32190 709 aa9.06□□□□□ -0.96
NYV1YLR093C ATH1P48016 1211 aa9.05□□□□□ -0.96
NYV1YLR093C NOP53Q12080 455 aaKnown RBP9.03□□□□□ -0.96
NYV1YLR093C SAP30P38429 201 aa9.01□□□□□ -0.97
NYV1YLR093C NST1P53935 1240 aa8.97□□□□□ -0.97
NYV1YLR093C CHL1P22516 861 aaPredicted RBP8.94□□□□□ -0.98
NYV1YLR093C PRE3P38624 215 aa8.92□□□□□ -0.98
NYV1YLR093C SOL3P38858 249 aa8.91□□□□□ -0.98
NYV1YLR093C PML39Q03760 334 aa8.9□□□□□ -0.98
NYV1YLR093C AI4P03878 556 aa8.89□□□□□ -0.99
NYV1YLR093C MPH3P0CE00 602 aa8.89□□□□□ -0.99
NYV1YLR093C BCK2P33306 851 aa8.84□□□□□ -0.99
NYV1YLR093C YGR273CP53329 174 aa8.82□□□□□ -1
NYV1YLR093C ILV3P39522 585 aaKnown RBP8.8□□□□□ -1
NYV1YLR093C ARH1P48360 493 aa8.79□□□□□ -1
NYV1YLR093C MID1P41821 548 aa8.78□□□□□ -1
NYV1YLR093C YDR344CQ05510 147 aa8.78□□□□□ -1
NYV1YLR093C ELP4Q02884 456 aaKnown RBP8.77□□□□□ -1.01
NYV1YLR093C SET1P38827 1080 aaKnown RBP8.76□□□□□ -1.01
NYV1YLR093C PEX29Q03370 554 aa8.73□□□□□ -1.01
NYV1YLR093C SPT23P35210 1082 aa8.69□□□□□ -1.02
NYV1YLR093C XDJ1P39102 459 aa8.68□□□□□ -1.02
NYV1YLR093C HAP5Q02516 242 aa8.68□□□□□ -1.02
NYV1YLR093C VRP1P37370 817 aa8.67□□□□□ -1.02
NYV1YLR093C MPC54Q08550 464 aa8.67□□□□□ -1.02
NYV1YLR093C SLI15P38283 698 aa8.66□□□□□ -1.02
NYV1YLR093C KEX1P09620 729 aa8.65□□□□□ -1.02
NYV1YLR093C BNI4P53858 892 aa8.65□□□□□ -1.02
NYV1YLR093C IFH1P39520 1085 aa8.63□□□□□ -1.03
NYV1YLR093C DPL1Q05567 589 aa8.61□□□□□ -1.03
NYV1YLR093C YML082WQ04533 649 aaKnown RBP8.6□□□□□ -1.03
NYV1YLR093C YLR326WQ06170 240 aaKnown RBP8.6□□□□□ -1.03
NYV1YLR093C UBP14P38237 781 aaKnown RBP8.59□□□□□ -1.03
NYV1YLR093C PTC2P39966 464 aaKnown RBP8.58□□□□□ -1.04
NYV1YLR093C NMA111P53920 997 aa8.58□□□□□ -1.04
NYV1YLR093C YPR148CQ06523 435 aa8.56□□□□□ -1.04
NYV1YLR093C VHR2P40041 505 aa8.55□□□□□ -1.04
NYV1YLR093C ISU2Q12056 156 aa8.53□□□□□ -1.04
NYV1YLR093C PCS60P38137 543 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
NYV1YLR093C RAD54P32863 898 aa8.51□□□□□ -1.05
NYV1YLR093C CDC73Q06697 393 aa8.49□□□□□ -1.05
NYV1YLR093C RPP1BP10622 106 aaKnown RBP8.47□□□□□ -1.05
NYV1YLR093C YDR090CQ03193 310 aa8.47□□□□□ -1.05
NYV1YLR093C RAM1P22007 431 aa8.46□□□□□ -1.06
NYV1YLR093C DPS1P04802 557 aaKnown RBP8.45□□□□□ -1.06
NYV1YLR093C REF2P42073 533 aaPredicted RBP8.44□□□□□ -1.06
NYV1YLR093C YPR015CQ12531 247 aa8.42□□□□□ -1.06
NYV1YLR093C KIC1P38692 1080 aa8.41□□□□□ -1.06
NYV1YLR093C GAP1P19145 602 aaPredicted RBP8.38□□□□□ -1.07
NYV1YLR093C MAK21Q12176 1025 aaKnown RBP8.37□□□□□ -1.07
NYV1YLR093C VPS70P47161 811 aa8.36□□□□□ -1.07
NYV1YLR093C PDR1P12383 1068 aa8.34□□□□□ -1.07
NYV1YLR093C CSC1Q06538 782 aa8.34□□□□□ -1.07
NYV1YLR093C TFB4Q12004 338 aa8.33□□□□□ -1.08
NYV1YLR093C COX6P00427 148 aa8.32□□□□□ -1.08
NYV1YLR093C SAS4Q04003 481 aa8.32□□□□□ -1.08
NYV1YLR093C ORC6P38826 435 aa8.3□□□□□ -1.08
NYV1YLR093C PEX21P50091 288 aa8.3□□□□□ -1.08
NYV1YLR093C GYP1Q08484 637 aa8.29□□□□□ -1.08
NYV1YLR093C YRR1Q12172 810 aa8.27□□□□□ -1.09
NYV1YLR093C CKB1P43639 278 aa8.26□□□□□ -1.09
NYV1YLR093C SRC1Q03707 834 aa8.26□□□□□ -1.09
NYV1YLR093C AMS1P22855 1083 aa8.22□□□□□ -1.09
NYV1YLR093C BUD20Q08004 166 aaPredicted RBP8.22□□□□□ -1.09
NYV1YLR093C TUM1Q08686 304 aaKnown RBP8.22□□□□□ -1.09
NYV1YLR093C RAS1P01119 309 aa8.21□□□□□ -1.1
NYV1YLR093C SDH2P21801 266 aa8.21□□□□□ -1.1
NYV1YLR093C STR2P47164 639 aa8.21□□□□□ -1.1
NYV1YLR093C NUD1P32336 851 aa8.2□□□□□ -1.1
NYV1YLR093C MVP1P40959 511 aaKnown RBP8.2□□□□□ -1.1
NYV1YLR093C PRT1P06103 763 aaKnown RBP8.19□□□□□ -1.1
NYV1YLR093C ISM1P48526 1002 aa8.19□□□□□ -1.1
NYV1YLR093C PBS2P08018 668 aa8.18□□□□□ -1.1
NYV1YLR093C MRF1P30775 413 aaPredicted RBP8.18□□□□□ -1.1
NYV1YLR093C SAS10Q12136 610 aaPredicted RBP8.18□□□□□ -1.1
NYV1YLR093C YEL077CQ3E7X8 1277 aa8.17□□□□□ -1.1
NYV1YLR093C RGR1P19263 1082 aa8.16□□□□□ -1.1
NYV1YLR093C NPL4P33755 580 aa8.14□□□□□ -1.11
NYV1YLR093C DMA1P38823 416 aa8.14□□□□□ -1.11
NYV1YLR093C YPR109WQ06104 294 aa8.12□□□□□ -1.11
NYV1YLR093C PSE1P32337 1089 aaKnown RBP8.11□□□□□ -1.11
NYV1YLR093C TY1A-DR4O74302 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-HP0C2I4 478 aaKnown RBP8.1□□□□□ -1.11
NYV1YLR093C TY1A-AP0CX57 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-PR1P0CX58 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-ORP0CX59 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-PR2P0CX60 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-DR5P0CX65 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-ER2P0CX66 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-GR3P0CX67 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-LR1P0CX68 440 aa8.1□□□□□ -1.11
NYV1YLR093C TY1A-MR2P0CX69 440 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms