RNA–Protein interactions for RNA: YLR089C

ALT1, Transcript of Alanine transaminase (glutamic pyruvic transaminase), yeastyeast

Gene ALT1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ALT1YLR089C SAS10Q12136 610 aaPredicted RBP8.29□□□□□ -1.08
ALT1YLR089C STH1P32597 1359 aa8.29□□□□□ -1.08
ALT1YLR089C TY1B-JR2P47100 1755 aaKnown RBP8.26□□□□□ -1.09
ALT1YLR089C TY1B-ER2Q03619 1755 aa8.26□□□□□ -1.09
ALT1YLR089C TY1B-MR1Q04214 1755 aa8.26□□□□□ -1.09
ALT1YLR089C TY1B-MR2Q04670 1755 aaKnown RBP8.26□□□□□ -1.09
ALT1YLR089C TY1B-LR1Q12088 1755 aaKnown RBP8.26□□□□□ -1.09
ALT1YLR089C TY1B-NL1Q12112 1755 aa8.26□□□□□ -1.09
ALT1YLR089C TY1B-GR1Q12141 1755 aa8.26□□□□□ -1.09
ALT1YLR089C TY1B-BLQ12490 1755 aa8.26□□□□□ -1.09
ALT1YLR089C SNQ2P32568 1501 aaKnown RBP8.25□□□□□ -1.09
ALT1YLR089C NTE1Q04958 1679 aa8.24□□□□□ -1.09
ALT1YLR089C NUP159P40477 1460 aa8.23□□□□□ -1.09
ALT1YLR089C RPL17AP05740 184 aaKnown RBP8.22□□□□□ -1.09
ALT1YLR089C RPL17BP46990 184 aaKnown RBP8.22□□□□□ -1.09
ALT1YLR089C RPO21P04050 1733 aaKnown RBP8.2□□□□□ -1.1
ALT1YLR089C MLP2P40457 1679 aa8.2□□□□□ -1.1
ALT1YLR089C LEU3P08638 886 aa8.2□□□□□ -1.1
ALT1YLR089C RTT106P40161 455 aa8.2□□□□□ -1.1
ALT1YLR089C SNT2P53127 1403 aa8.19□□□□□ -1.1
ALT1YLR089C LTE1P07866 1435 aa8.18□□□□□ -1.1
ALT1YLR089C PDR15Q04182 1529 aaKnown RBP8.16□□□□□ -1.1
ALT1YLR089C SSP1P38871 571 aa8.15□□□□□ -1.1
ALT1YLR089C GEA2P39993 1459 aaKnown RBP8.15□□□□□ -1.11
ALT1YLR089C VPS15P22219 1454 aa8.14□□□□□ -1.11
ALT1YLR089C RPG1P38249 964 aaKnown RBP8.14□□□□□ -1.11
ALT1YLR089C YRF1-1P0CX20 1796 aa8.14□□□□□ -1.11
ALT1YLR089C YRF1-5P0CX21 1796 aa8.14□□□□□ -1.11
ALT1YLR089C YRF1-8P0CX22 1796 aa8.14□□□□□ -1.11
ALT1YLR089C ULS1Q08562 1619 aa8.13□□□□□ -1.11
ALT1YLR089C IFH1P39520 1085 aa8.13□□□□□ -1.11
ALT1YLR089C RIM101P33400 625 aa8.12□□□□□ -1.11
ALT1YLR089C MET10P39692 1035 aa8.12□□□□□ -1.11
ALT1YLR089C GEA1P47102 1408 aaPredicted RBP8.07□□□□□ -1.12
ALT1YLR089C PDR12Q02785 1511 aa8.06□□□□□ -1.12
ALT1YLR089C IRC20Q06554 1556 aa8.05□□□□□ -1.12
ALT1YLR089C DRS2P39524 1355 aa8.04□□□□□ -1.12
ALT1YLR089C SPO14P36126 1683 aa8.04□□□□□ -1.12
ALT1YLR089C REB1P21538 810 aa8.03□□□□□ -1.12
ALT1YLR089C SPT21P35209 758 aa8.03□□□□□ -1.12
ALT1YLR089C SIS2P36024 562 aa8.02□□□□□ -1.13
ALT1YLR089C EBP2P36049 427 aaKnown RBP8.02□□□□□ -1.13
ALT1YLR089C CAT8P39113 1433 aa8.02□□□□□ -1.13
ALT1YLR089C NUP157P40064 1391 aaKnown RBP8.02□□□□□ -1.13
ALT1YLR089C NUP170P38181 1502 aa8.01□□□□□ -1.13
ALT1YLR089C GDB1Q06625 1536 aa8.01□□□□□ -1.13
ALT1YLR089C CAB3P36076 571 aa7.99□□□□□ -1.13
ALT1YLR089C ITT1Q04638 464 aa7.99□□□□□ -1.13
ALT1YLR089C PDR10P51533 1564 aa7.98□□□□□ -1.13
ALT1YLR089C BUD3P25558 1636 aa7.97□□□□□ -1.13
ALT1YLR089C IQG1Q12280 1495 aa7.97□□□□□ -1.13
ALT1YLR089C BNI1P41832 1953 aa7.97□□□□□ -1.13
ALT1YLR089C TY3B-GQ99315 1547 aa7.96□□□□□ -1.14
ALT1YLR089C YBT1P32386 1661 aa7.95□□□□□ -1.14
ALT1YLR089C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
ALT1YLR089C MMS1Q06211 1407 aa7.93□□□□□ -1.14
ALT1YLR089C TRM3Q07527 1436 aa7.92□□□□□ -1.14
ALT1YLR089C CKB1P43639 278 aa7.92□□□□□ -1.14
ALT1YLR089C AAD16Q02895 342 aa7.92□□□□□ -1.14
ALT1YLR089C IKI3Q06706 1349 aaKnown RBP7.92□□□□□ -1.14
ALT1YLR089C YCK3P39962 524 aa7.91□□□□□ -1.14
ALT1YLR089C DOP1Q03921 1698 aa7.9□□□□□ -1.14
ALT1YLR089C ARO1P08566 1588 aaKnown RBP7.9□□□□□ -1.15
ALT1YLR089C PRI1P10363 409 aa7.89□□□□□ -1.15
ALT1YLR089C NOP2P40991 618 aaKnown RBP7.89□□□□□ -1.15
ALT1YLR089C OXP1P28273 1286 aa7.88□□□□□ -1.15
ALT1YLR089C RPN1P38764 993 aaKnown RBP7.88□□□□□ -1.15
ALT1YLR089C SRB8P25648 1427 aa7.87□□□□□ -1.15
ALT1YLR089C YSP2Q06681 1438 aa7.84□□□□□ -1.15
ALT1YLR089C BNR1P40450 1375 aa7.84□□□□□ -1.15
ALT1YLR089C DMA2P53924 522 aa7.84□□□□□ -1.15
ALT1YLR089C YAH1Q12184 172 aaKnown RBP7.83□□□□□ -1.16
ALT1YLR089C SEC7P11075 2009 aaKnown RBP7.82□□□□□ -1.16
ALT1YLR089C YFR016CP43597 1233 aaKnown RBP7.82□□□□□ -1.16
ALT1YLR089C CHC1P22137 1653 aaKnown RBP7.82□□□□□ -1.16
ALT1YLR089C ABP1P15891 592 aaKnown RBP7.82□□□□□ -1.16
ALT1YLR089C BUD21Q08492 214 aaPredicted RBP7.82□□□□□ -1.16
ALT1YLR089C YLR271WQ06152 274 aa7.81□□□□□ -1.16
ALT1YLR089C DNF2Q12675 1612 aa7.8□□□□□ -1.16
ALT1YLR089C SSM4P40318 1319 aa7.79□□□□□ -1.16
ALT1YLR089C MGA2P40578 1113 aa7.78□□□□□ -1.16
ALT1YLR089C HAA1Q12753 694 aaKnown RBP7.76□□□□□ -1.17
ALT1YLR089C YIL055CP40523 627 aaKnown RBP7.75□□□□□ -1.17
ALT1YLR089C RLF2Q12495 606 aa7.74□□□□□ -1.17
ALT1YLR089C YRB30P53107 440 aaPredicted RBP7.73□□□□□ -1.17
ALT1YLR089C MIF2P35201 549 aa7.71□□□□□ -1.17
ALT1YLR089C YOR093CQ12275 1648 aa7.69□□□□□ -1.18
ALT1YLR089C YAP3P38749 330 aa7.69□□□□□ -1.18
ALT1YLR089C RPS0BP46654 252 aaKnown RBP7.68□□□□□ -1.18
ALT1YLR089C GCN2P15442 1659 aa7.67□□□□□ -1.18
ALT1YLR089C NAP1P25293 417 aaKnown RBP7.64□□□□□ -1.19
ALT1YLR089C NUP188P52593 1655 aaKnown RBP7.64□□□□□ -1.19
ALT1YLR089C RSM7P47150 247 aa7.64□□□□□ -1.19
ALT1YLR089C PAF1P38351 445 aa7.63□□□□□ -1.19
ALT1YLR089C IPL1P38991 367 aa7.62□□□□□ -1.19
ALT1YLR089C DNF3Q12674 1656 aa7.62□□□□□ -1.19
ALT1YLR089C KRI1P42846 591 aaKnown RBP7.61□□□□□ -1.19
ALT1YLR089C CST9Q06032 482 aa7.61□□□□□ -1.19
ALT1YLR089C SPB4P25808 606 aaPredicted RBP7.6□□□□□ -1.19
ALT1YLR089C PDR5P33302 1511 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms