RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C TY1B-GR2Q12269 1755 aa7.83□□□□□ -1.16
SSK1YLR006C TY1B-OLQ12273 1755 aa7.83□□□□□ -1.16
SSK1YLR006C TY1B-PLQ12414 1755 aaKnown RBP7.83□□□□□ -1.16
SSK1YLR006C SNU71P53207 620 aaKnown RBP7.82□□□□□ -1.16
SSK1YLR006C GEA1P47102 1408 aaPredicted RBP7.82□□□□□ -1.16
SSK1YLR006C SIS2P36024 562 aa7.81□□□□□ -1.16
SSK1YLR006C TY1B-BRQ12193 1756 aa7.8□□□□□ -1.16
SSK1YLR006C TY1B-GR3Q12316 1755 aa7.8□□□□□ -1.16
SSK1YLR006C TY1B-ORQ92393 1755 aa7.8□□□□□ -1.16
SSK1YLR006C PAN1P32521 1480 aa7.8□□□□□ -1.16
SSK1YLR006C TOP1P04786 769 aa7.79□□□□□ -1.16
SSK1YLR006C KRI1P42846 591 aaKnown RBP7.78□□□□□ -1.16
SSK1YLR006C RLF2Q12495 606 aa7.78□□□□□ -1.16
SSK1YLR006C VTH1P40438 1549 aa7.76□□□□□ -1.17
SSK1YLR006C VTH2P40890 1549 aa7.76□□□□□ -1.17
SSK1YLR006C NSR1P27476 414 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
SSK1YLR006C TSC11P40061 1430 aa7.75□□□□□ -1.17
SSK1YLR006C TY3B-GQ99315 1547 aa7.74□□□□□ -1.17
SSK1YLR006C YBT1P32386 1661 aa7.72□□□□□ -1.17
SSK1YLR006C CDC25P04821 1589 aa7.72□□□□□ -1.17
SSK1YLR006C TY1B-JR2P47100 1755 aaKnown RBP7.71□□□□□ -1.17
SSK1YLR006C TY1B-ER2Q03619 1755 aa7.71□□□□□ -1.17
SSK1YLR006C TY1B-MR1Q04214 1755 aa7.71□□□□□ -1.17
SSK1YLR006C TY1B-MR2Q04670 1755 aaKnown RBP7.71□□□□□ -1.17
SSK1YLR006C TY1B-LR1Q12088 1755 aaKnown RBP7.71□□□□□ -1.17
SSK1YLR006C TY1B-NL1Q12112 1755 aa7.71□□□□□ -1.17
SSK1YLR006C TY1B-GR1Q12141 1755 aa7.71□□□□□ -1.17
SSK1YLR006C TY1B-BLQ12490 1755 aa7.71□□□□□ -1.17
SSK1YLR006C ESC1Q03661 1658 aaKnown RBP7.71□□□□□ -1.18
SSK1YLR006C NOP2P40991 618 aaKnown RBP7.7□□□□□ -1.18
SSK1YLR006C RTT106P40161 455 aa7.67□□□□□ -1.18
SSK1YLR006C POL5P39985 1022 aaKnown RBP7.67□□□□□ -1.18
SSK1YLR006C NTE1Q04958 1679 aa7.66□□□□□ -1.18
SSK1YLR006C VPS15P22219 1454 aa7.66□□□□□ -1.18
SSK1YLR006C DNF1P32660 1571 aa7.65□□□□□ -1.18
SSK1YLR006C SNT2P53127 1403 aa7.64□□□□□ -1.19
SSK1YLR006C ATG36P46983 293 aa7.63□□□□□ -1.19
SSK1YLR006C PDR10P51533 1564 aa7.62□□□□□ -1.19
SSK1YLR006C RPO21P04050 1733 aaKnown RBP7.62□□□□□ -1.19
SSK1YLR006C SWE1P32944 819 aa7.61□□□□□ -1.19
SSK1YLR006C PTP3P40048 928 aa7.61□□□□□ -1.19
SSK1YLR006C GEA2P39993 1459 aaKnown RBP7.61□□□□□ -1.19
SSK1YLR006C IRC20Q06554 1556 aa7.61□□□□□ -1.19
SSK1YLR006C RPA190P10964 1664 aaKnown RBP7.59□□□□□ -1.19
SSK1YLR006C NOP8Q08287 484 aaPredicted RBP7.59□□□□□ -1.19
SSK1YLR006C MDG1P53885 366 aa7.58□□□□□ -1.2
SSK1YLR006C RPN1P38764 993 aaKnown RBP7.58□□□□□ -1.2
SSK1YLR006C YML020WQ03722 664 aa7.57□□□□□ -1.2
SSK1YLR006C CAT8P39113 1433 aa7.57□□□□□ -1.2
SSK1YLR006C ENP1P38333 483 aaKnown RBP7.57□□□□□ -1.2
SSK1YLR006C GDB1Q06625 1536 aa7.56□□□□□ -1.2
SSK1YLR006C ARO1P08566 1588 aaKnown RBP7.56□□□□□ -1.2
SSK1YLR006C GCN2P15442 1659 aa7.55□□□□□ -1.2
SSK1YLR006C SPT7P35177 1332 aa7.55□□□□□ -1.2
SSK1YLR006C CWC22P53333 577 aaKnown RBP7.55□□□□□ -1.2
SSK1YLR006C EBP2P36049 427 aaKnown RBP7.54□□□□□ -1.2
SSK1YLR006C SRB8P25648 1427 aa7.53□□□□□ -1.2
SSK1YLR006C NUP159P40477 1460 aa7.53□□□□□ -1.2
SSK1YLR006C RPS0BP46654 252 aaKnown RBP7.52□□□□□ -1.2
SSK1YLR006C BRL1P38770 471 aa7.52□□□□□ -1.21
SSK1YLR006C CKB1P43639 278 aa7.52□□□□□ -1.21
SSK1YLR006C SEC3P33332 1336 aaKnown RBP7.51□□□□□ -1.21
SSK1YLR006C BUD3P25558 1636 aa7.51□□□□□ -1.21
SSK1YLR006C LAM6Q08001 693 aa7.51□□□□□ -1.21
SSK1YLR006C SPO14P36126 1683 aa7.49□□□□□ -1.21
SSK1YLR006C NUG1P40010 520 aaKnown RBP7.48□□□□□ -1.21
SSK1YLR006C GIN4Q12263 1142 aa7.48□□□□□ -1.21
SSK1YLR006C NOP7P53261 605 aaKnown RBP7.47□□□□□ -1.21
SSK1YLR006C TPO2P53283 614 aa7.46□□□□□ -1.21
SSK1YLR006C MNN4P36044 1178 aa7.45□□□□□ -1.22
SSK1YLR006C BUD21Q08492 214 aaPredicted RBP7.44□□□□□ -1.22
SSK1YLR006C NUP157P40064 1391 aaKnown RBP7.43□□□□□ -1.22
SSK1YLR006C YRF1-1P0CX20 1796 aa7.43□□□□□ -1.22
SSK1YLR006C YRF1-5P0CX21 1796 aa7.43□□□□□ -1.22
SSK1YLR006C YRF1-8P0CX22 1796 aa7.43□□□□□ -1.22
SSK1YLR006C PDR12Q02785 1511 aa7.42□□□□□ -1.22
SSK1YLR006C IQG1Q12280 1495 aa7.41□□□□□ -1.22
SSK1YLR006C YOR093CQ12275 1648 aa7.4□□□□□ -1.22
SSK1YLR006C RLP24Q07915 199 aaKnown RBP7.4□□□□□ -1.23
SSK1YLR006C MET10P39692 1035 aa7.39□□□□□ -1.23
SSK1YLR006C FAR11P53917 953 aa7.39□□□□□ -1.23
SSK1YLR006C JSN1P47135 1091 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SSK1YLR006C PDR5P33302 1511 aaKnown RBP7.38□□□□□ -1.23
SSK1YLR006C PAF1P38351 445 aa7.37□□□□□ -1.23
SSK1YLR006C PSD2P53037 1138 aaKnown RBP7.37□□□□□ -1.23
SSK1YLR006C MHP1P43638 1398 aa7.37□□□□□ -1.23
SSK1YLR006C MMS1Q06211 1407 aa7.37□□□□□ -1.23
SSK1YLR006C YSP2Q06681 1438 aa7.36□□□□□ -1.23
SSK1YLR006C CHC1P22137 1653 aaKnown RBP7.35□□□□□ -1.23
SSK1YLR006C PRS1P32895 427 aaKnown RBP7.35□□□□□ -1.23
SSK1YLR006C SLX8P40072 274 aa7.34□□□□□ -1.23
SSK1YLR006C SPC42P36094 363 aa7.33□□□□□ -1.24
SSK1YLR006C CAB3P36076 571 aa7.32□□□□□ -1.24
SSK1YLR006C LTE1P07866 1435 aa7.32□□□□□ -1.24
SSK1YLR006C MRX12P47084 519 aa7.31□□□□□ -1.24
SSK1YLR006C VPS72Q03388 795 aa7.31□□□□□ -1.24
SSK1YLR006C ASF1P32447 279 aa7.3□□□□□ -1.24
SSK1YLR006C TOA1P32773 286 aa7.3□□□□□ -1.24
SSK1YLR006C YLR419WQ06698 1435 aaKnown RBP7.3□□□□□ -1.24
SSK1YLR006C BNR1P40450 1375 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms