RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C GYP5Q12344 894 aa6.32□□□□□ -1.4
COF1YLL050C YEL023CP39992 682 aa6.31□□□□□ -1.4
COF1YLL050C RTG3P38165 486 aa6.3□□□□□ -1.4
COF1YLL050C YDR344CQ05510 147 aa6.29□□□□□ -1.4
COF1YLL050C DCW1P36091 449 aa6.27□□□□□ -1.41
COF1YLL050C ELP4Q02884 456 aaKnown RBP6.26□□□□□ -1.41
COF1YLL050C SRC1Q03707 834 aa6.25□□□□□ -1.41
COF1YLL050C PML39Q03760 334 aa6.21□□□□□ -1.42
COF1YLL050C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
COF1YLL050C CST9Q06032 482 aa6.18□□□□□ -1.42
COF1YLL050C ARH1P48360 493 aa6.16□□□□□ -1.42
COF1YLL050C RCR1P38212 213 aa6.14□□□□□ -1.43
COF1YLL050C SPT23P35210 1082 aa6.09□□□□□ -1.43
COF1YLL050C SSP1P38871 571 aa6.09□□□□□ -1.43
COF1YLL050C MGA2P40578 1113 aa6.08□□□□□ -1.44
COF1YLL050C GRE2Q12068 342 aaKnown RBP6.08□□□□□ -1.44
COF1YLL050C MID1P41821 548 aa6.05□□□□□ -1.44
COF1YLL050C PEX29Q03370 554 aa6.02□□□□□ -1.45
COF1YLL050C HAP5Q02516 242 aa6.01□□□□□ -1.45
COF1YLL050C BNI4P53858 892 aa6□□□□□ -1.45
COF1YLL050C YML082WQ04533 649 aaKnown RBP5.99□□□□□ -1.45
COF1YLL050C PTC2P39966 464 aaKnown RBP5.98□□□□□ -1.45
COF1YLL050C GUT1P32190 709 aa5.97□□□□□ -1.45
COF1YLL050C TFA1P36100 482 aa5.97□□□□□ -1.45
COF1YLL050C ATH1P48016 1211 aa5.97□□□□□ -1.45
COF1YLL050C NST1P53935 1240 aa5.97□□□□□ -1.45
COF1YLL050C RAS1P01119 309 aa5.94□□□□□ -1.46
COF1YLL050C AI4P03878 556 aa5.9□□□□□ -1.46
COF1YLL050C MPH3P0CE00 602 aa5.9□□□□□ -1.46
COF1YLL050C TRK1P12685 1235 aa5.9□□□□□ -1.46
COF1YLL050C MIF2P35201 549 aa5.9□□□□□ -1.46
COF1YLL050C PTC3P34221 468 aaKnown RBP5.89□□□□□ -1.47
COF1YLL050C YPL062WQ02781 134 aa5.88□□□□□ -1.47
COF1YLL050C SOL3P38858 249 aa5.86□□□□□ -1.47
COF1YLL050C MPC54Q08550 464 aa5.86□□□□□ -1.47
COF1YLL050C EDS1P38073 919 aa5.85□□□□□ -1.47
COF1YLL050C ILV3P39522 585 aaKnown RBP5.85□□□□□ -1.47
COF1YLL050C AMS1P22855 1083 aa5.82□□□□□ -1.48
COF1YLL050C MAK11P20484 414 aaKnown RBP5.81□□□□□ -1.48
COF1YLL050C NMA111P53920 997 aa5.81□□□□□ -1.48
COF1YLL050C YPR015CQ12531 247 aa5.79□□□□□ -1.48
COF1YLL050C RAM1P22007 431 aa5.74□□□□□ -1.49
COF1YLL050C DPL1Q05567 589 aa5.74□□□□□ -1.49
COF1YLL050C GYP1Q08484 637 aa5.74□□□□□ -1.49
COF1YLL050C COQ8P27697 501 aa5.73□□□□□ -1.49
COF1YLL050C SDH2P21801 266 aa5.7□□□□□ -1.5
COF1YLL050C SLI15P38283 698 aa5.7□□□□□ -1.5
COF1YLL050C YGR273CP53329 174 aa5.7□□□□□ -1.5
COF1YLL050C RAM2P29703 316 aa5.69□□□□□ -1.5
COF1YLL050C SAS4Q04003 481 aa5.67□□□□□ -1.5
COF1YLL050C YEL077CQ3E7X8 1277 aa5.67□□□□□ -1.5
COF1YLL050C ISU2Q12056 156 aa5.66□□□□□ -1.5
COF1YLL050C GBP2P25555 427 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
COF1YLL050C GAR1P28007 205 aaKnown RBP5.63□□□□□ -1.51
COF1YLL050C BRE2P43132 505 aa5.63□□□□□ -1.51
COF1YLL050C PDR1P12383 1068 aa5.58□□□□□ -1.52
COF1YLL050C GCR2Q01722 534 aa5.58□□□□□ -1.52
COF1YLL050C NOP53Q12080 455 aaKnown RBP5.58□□□□□ -1.52
COF1YLL050C MRF1P30775 413 aaPredicted RBP5.57□□□□□ -1.52
COF1YLL050C CDC73Q06697 393 aa5.55□□□□□ -1.52
COF1YLL050C AIR1P40507 360 aaKnown RBP5.53□□□□□ -1.52
COF1YLL050C KEX1P09620 729 aa5.52□□□□□ -1.53
COF1YLL050C ERG12P07277 443 aa5.47□□□□□ -1.53
COF1YLL050C CLA4P48562 842 aa5.47□□□□□ -1.53
COF1YLL050C PRT1P06103 763 aaKnown RBP5.44□□□□□ -1.54
COF1YLL050C MET22P32179 357 aa5.44□□□□□ -1.54
COF1YLL050C CST6P40535 587 aa5.44□□□□□ -1.54
COF1YLL050C BUD20Q08004 166 aaPredicted RBP5.44□□□□□ -1.54
COF1YLL050C ENV9Q08651 330 aa5.43□□□□□ -1.54
COF1YLL050C RPP1BP10622 106 aaKnown RBP5.4□□□□□ -1.54
COF1YLL050C LAM6Q08001 693 aa5.4□□□□□ -1.54
COF1YLL050C CDC4P07834 779 aa5.39□□□□□ -1.55
COF1YLL050C STR2P47164 639 aa5.38□□□□□ -1.55
COF1YLL050C YLR326WQ06170 240 aaKnown RBP5.38□□□□□ -1.55
COF1YLL050C YDR444WQ04093 687 aa5.37□□□□□ -1.55
COF1YLL050C PCS60P38137 543 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
COF1YLL050C UBP14P38237 781 aaKnown RBP5.34□□□□□ -1.55
COF1YLL050C ISM1P48526 1002 aa5.34□□□□□ -1.55
COF1YLL050C FRK1Q03002 865 aaPredicted RBP5.34□□□□□ -1.55
COF1YLL050C YDL176WQ12027 708 aa5.34□□□□□ -1.55
COF1YLL050C YRR1Q12172 810 aa5.34□□□□□ -1.55
COF1YLL050C RAD54P32863 898 aa5.33□□□□□ -1.56
COF1YLL050C VHR2P40041 505 aa5.32□□□□□ -1.56
COF1YLL050C PEX21P50091 288 aa5.31□□□□□ -1.56
COF1YLL050C LCB5Q06147 687 aaKnown RBP5.31□□□□□ -1.56
COF1YLL050C NUD1P32336 851 aa5.3□□□□□ -1.56
COF1YLL050C SPT16P32558 1035 aaKnown RBP5.3□□□□□ -1.56
COF1YLL050C MTC5Q03897 1148 aa5.3□□□□□ -1.56
COF1YLL050C BDP1P46678 594 aa5.28□□□□□ -1.56
COF1YLL050C HED1Q03937 162 aa5.27□□□□□ -1.57
COF1YLL050C TY1A-DR4O74302 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-HP0C2I4 478 aaKnown RBP5.26□□□□□ -1.57
COF1YLL050C TY1A-AP0CX57 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-PR1P0CX58 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-ORP0CX59 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-PR2P0CX60 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-DR5P0CX65 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-ER2P0CX66 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-GR3P0CX67 440 aa5.26□□□□□ -1.57
COF1YLL050C TY1A-LR1P0CX68 440 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms