RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W MAM3Q12296 706 aa3.72□□□□□ -1.81
SDC25YLL016W CDC25P04821 1589 aa3.72□□□□□ -1.81
SDC25YLL016W SIN3P22579 1536 aa3.71□□□□□ -1.81
SDC25YLL016W SSA1P10591 642 aaKnown RBP3.71□□□□□ -1.82
SDC25YLL016W AIM7Q12156 149 aa3.71□□□□□ -1.82
SDC25YLL016W DNF1P32660 1571 aa3.71□□□□□ -1.82
SDC25YLL016W BDF1P35817 686 aa3.71□□□□□ -1.82
SDC25YLL016W GUA1P38625 525 aaKnown RBP3.71□□□□□ -1.82
SDC25YLL016W IES2P40154 320 aa3.7□□□□□ -1.82
SDC25YLL016W BNI1P41832 1953 aa3.7□□□□□ -1.82
SDC25YLL016W UBP10P53874 792 aaPredicted RBP3.7□□□□□ -1.82
SDC25YLL016W ATF2P53296 535 aa3.7□□□□□ -1.82
SDC25YLL016W IOC4Q04213 475 aa3.7□□□□□ -1.82
SDC25YLL016W GEA2P39993 1459 aaKnown RBP3.69□□□□□ -1.82
SDC25YLL016W GEF1P37020 779 aa3.69□□□□□ -1.82
SDC25YLL016W NOP7P53261 605 aaKnown RBP3.69□□□□□ -1.82
SDC25YLL016W MRM1P25270 412 aa3.68□□□□□ -1.82
SDC25YLL016W RCR1P38212 213 aa3.68□□□□□ -1.82
SDC25YLL016W RKR1Q04781 1562 aa3.68□□□□□ -1.82
SDC25YLL016W IRC20Q06554 1556 aa3.68□□□□□ -1.82
SDC25YLL016W SKI3P17883 1432 aaKnown RBP3.67□□□□□ -1.82
SDC25YLL016W YGL015CP33199 130 aa3.67□□□□□ -1.82
SDC25YLL016W DIT2P21595 489 aa3.67□□□□□ -1.82
SDC25YLL016W EPS1P40557 701 aa3.67□□□□□ -1.82
SDC25YLL016W NOP8Q08287 484 aaPredicted RBP3.67□□□□□ -1.82
SDC25YLL016W BRL1P38770 471 aa3.66□□□□□ -1.82
SDC25YLL016W ORC1P54784 914 aaPredicted RBP3.66□□□□□ -1.82
SDC25YLL016W TFB3Q03290 321 aa3.66□□□□□ -1.82
SDC25YLL016W ESP1Q03018 1630 aa3.66□□□□□ -1.82
SDC25YLL016W MAK21Q12176 1025 aaKnown RBP3.66□□□□□ -1.82
SDC25YLL016W MAK11P20484 414 aaKnown RBP3.65□□□□□ -1.82
SDC25YLL016W SUB2Q07478 446 aaKnown RBP3.65□□□□□ -1.82
SDC25YLL016W REF2P42073 533 aaPredicted RBP3.64□□□□□ -1.83
SDC25YLL016W HPC2Q01448 625 aa3.64□□□□□ -1.83
SDC25YLL016W RPO31P04051 1460 aa3.64□□□□□ -1.83
SDC25YLL016W UFD4P33202 1483 aa3.64□□□□□ -1.83
SDC25YLL016W RTG3P38165 486 aa3.64□□□□□ -1.83
SDC25YLL016W MMS1Q06211 1407 aa3.64□□□□□ -1.83
SDC25YLL016W CHD1P32657 1468 aa3.63□□□□□ -1.83
SDC25YLL016W SLD2P34252 453 aa3.63□□□□□ -1.83
SDC25YLL016W NUP42P49686 430 aaKnown RBP3.63□□□□□ -1.83
SDC25YLL016W RPL34BP40525 121 aaKnown RBP3.63□□□□□ -1.83
SDC25YLL016W YJL007CP47080 104 aa3.63□□□□□ -1.83
SDC25YLL016W COQ8P27697 501 aa3.62□□□□□ -1.83
SDC25YLL016W SCY1P53009 804 aa3.62□□□□□ -1.83
SDC25YLL016W SSA4P22202 642 aaKnown RBP3.62□□□□□ -1.83
SDC25YLL016W TY1B-BRQ12193 1756 aa3.62□□□□□ -1.83
SDC25YLL016W TY1B-GR3Q12316 1755 aa3.62□□□□□ -1.83
SDC25YLL016W TY1B-ORQ92393 1755 aa3.62□□□□□ -1.83
SDC25YLL016W SNU71P53207 620 aaKnown RBP3.61□□□□□ -1.83
SDC25YLL016W RPL34AP87262 121 aaPredicted RBP3.61□□□□□ -1.83
SDC25YLL016W MST1P07236 462 aa3.61□□□□□ -1.83
SDC25YLL016W PKC1P24583 1151 aa3.61□□□□□ -1.83
SDC25YLL016W MET10P39692 1035 aa3.61□□□□□ -1.83
SDC25YLL016W SCC2Q04002 1493 aa3.6□□□□□ -1.83
SDC25YLL016W PAN1P32521 1480 aa3.6□□□□□ -1.83
SDC25YLL016W SSA2P10592 639 aaKnown RBP3.6□□□□□ -1.83
SDC25YLL016W BIM1P40013 344 aa3.6□□□□□ -1.83
SDC25YLL016W YPK9Q12697 1472 aa3.6□□□□□ -1.83
SDC25YLL016W DNF2Q12675 1612 aa3.59□□□□□ -1.83
SDC25YLL016W ITT1Q04638 464 aa3.59□□□□□ -1.83
SDC25YLL016W TY2B-LR1P0C2J3 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-FP0CX63 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-GR2P0CX64 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-CP25384 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-DR2Q03494 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY1B-DR1Q03855 1755 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-DR3Q07791 1770 aaKnown RBP3.59□□□□□ -1.84
SDC25YLL016W TY2B-OR1Q12113 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-DR1Q12472 1770 aa3.59□□□□□ -1.84
SDC25YLL016W TY2B-OR2Q12501 1770 aa3.59□□□□□ -1.84
SDC25YLL016W DRS2P39524 1355 aa3.59□□□□□ -1.84
SDC25YLL016W VPS29P38759 282 aa3.59□□□□□ -1.84
SDC25YLL016W ATG32P40458 529 aa3.58□□□□□ -1.84
SDC25YLL016W YOR093CQ12275 1648 aa3.58□□□□□ -1.84
SDC25YLL016W NSR1P27476 414 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SDC25YLL016W CSN12P47130 423 aa3.57□□□□□ -1.84
SDC25YLL016W COX6P00427 148 aa3.57□□□□□ -1.84
SDC25YLL016W CPS1P27614 576 aa3.57□□□□□ -1.84
SDC25YLL016W MRX12P47084 519 aa3.57□□□□□ -1.84
SDC25YLL016W TY1B-HO13535 1793 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-DR5P0C2I2 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-DR6P0C2I3 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-LR2P0C2I5 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-LR3P0C2I6 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W TY1B-PR1P0C2I9 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W TY1B-PR2P0C2J0 1756 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-PR3P0C2J1 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W TY1B-JR1P47098 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-ML2Q03434 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W TY1B-ER1Q03612 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-ML1Q04711 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W TY1B-GR2Q12269 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-OLQ12273 1755 aa3.55□□□□□ -1.84
SDC25YLL016W TY1B-PLQ12414 1755 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W CDC3P32457 520 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W YPR204WQ08995 1032 aa3.55□□□□□ -1.84
SDC25YLL016W ERG12P07277 443 aa3.55□□□□□ -1.84
SDC25YLL016W GLN1P32288 370 aaKnown RBP3.55□□□□□ -1.84
SDC25YLL016W VPS15P22219 1454 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms