RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W HTA2P04912 132 aa7.84□□□□□ -1.15
VPS51YKR020W ABP1P15891 592 aaKnown RBP7.84□□□□□ -1.15
VPS51YKR020W MGA2P40578 1113 aa7.83□□□□□ -1.16
VPS51YKR020W YEL023CP39992 682 aa7.82□□□□□ -1.16
VPS51YKR020W PTC4P38089 393 aa7.81□□□□□ -1.16
VPS51YKR020W VRP1P37370 817 aa7.77□□□□□ -1.17
VPS51YKR020W YDR344CQ05510 147 aa7.76□□□□□ -1.17
VPS51YKR020W XDJ1P39102 459 aa7.74□□□□□ -1.17
VPS51YKR020W PML39Q03760 334 aa7.69□□□□□ -1.18
VPS51YKR020W ELP4Q02884 456 aaKnown RBP7.68□□□□□ -1.18
VPS51YKR020W DPS1P04802 557 aaKnown RBP7.65□□□□□ -1.18
VPS51YKR020W GRE2Q12068 342 aaKnown RBP7.62□□□□□ -1.19
VPS51YKR020W MID1P41821 548 aa7.56□□□□□ -1.2
VPS51YKR020W ARH1P48360 493 aa7.56□□□□□ -1.2
VPS51YKR020W MIF2P35201 549 aa7.53□□□□□ -1.2
VPS51YKR020W ATH1P48016 1211 aa7.53□□□□□ -1.2
VPS51YKR020W GUT1P32190 709 aa7.5□□□□□ -1.21
VPS51YKR020W PTC3P34221 468 aaKnown RBP7.48□□□□□ -1.21
VPS51YKR020W SPT23P35210 1082 aa7.48□□□□□ -1.21
VPS51YKR020W EDS1P38073 919 aa7.48□□□□□ -1.21
VPS51YKR020W NST1P53935 1240 aa7.48□□□□□ -1.21
VPS51YKR020W RGA2Q06407 1009 aa7.48□□□□□ -1.21
VPS51YKR020W PEX29Q03370 554 aa7.47□□□□□ -1.21
VPS51YKR020W SRC1Q03707 834 aa7.47□□□□□ -1.21
VPS51YKR020W MAK11P20484 414 aaKnown RBP7.43□□□□□ -1.22
VPS51YKR020W SOL3P38858 249 aa7.43□□□□□ -1.22
VPS51YKR020W HAP5Q02516 242 aa7.41□□□□□ -1.22
VPS51YKR020W MPH3P0CE00 602 aa7.39□□□□□ -1.23
VPS51YKR020W AI4P03878 556 aa7.38□□□□□ -1.23
VPS51YKR020W RAM2P29703 316 aa7.38□□□□□ -1.23
VPS51YKR020W ILV3P39522 585 aaKnown RBP7.37□□□□□ -1.23
VPS51YKR020W RGA1P39083 1007 aa7.36□□□□□ -1.23
VPS51YKR020W PTC2P39966 464 aaKnown RBP7.36□□□□□ -1.23
VPS51YKR020W BNI4P53858 892 aa7.36□□□□□ -1.23
VPS51YKR020W YML082WQ04533 649 aaKnown RBP7.35□□□□□ -1.23
VPS51YKR020W COQ8P27697 501 aa7.34□□□□□ -1.23
VPS51YKR020W MPC54Q08550 464 aa7.31□□□□□ -1.24
VPS51YKR020W RAS1P01119 309 aa7.29□□□□□ -1.24
VPS51YKR020W NMA111P53920 997 aa7.27□□□□□ -1.25
VPS51YKR020W YGR273CP53329 174 aa7.25□□□□□ -1.25
VPS51YKR020W SLI15P38283 698 aa7.21□□□□□ -1.26
VPS51YKR020W YPR015CQ12531 247 aa7.21□□□□□ -1.26
VPS51YKR020W DPL1Q05567 589 aa7.2□□□□□ -1.26
VPS51YKR020W RAM1P22007 431 aa7.14□□□□□ -1.27
VPS51YKR020W DMA1P38823 416 aa7.14□□□□□ -1.27
VPS51YKR020W GYP1Q08484 637 aa7.13□□□□□ -1.27
VPS51YKR020W TRK1P12685 1235 aa7.12□□□□□ -1.27
VPS51YKR020W AMS1P22855 1083 aa7.12□□□□□ -1.27
VPS51YKR020W NOP53Q12080 455 aaKnown RBP7.11□□□□□ -1.27
VPS51YKR020W ISU2Q12056 156 aa7.09□□□□□ -1.27
VPS51YKR020W SET1P38827 1080 aaKnown RBP7.08□□□□□ -1.28
VPS51YKR020W KEX1P09620 729 aa7.05□□□□□ -1.28
VPS51YKR020W CDC73Q06697 393 aa7.05□□□□□ -1.28
VPS51YKR020W PDR1P12383 1068 aa7.04□□□□□ -1.28
VPS51YKR020W SDH2P21801 266 aa7.04□□□□□ -1.28
VPS51YKR020W RQC2Q12532 1038 aaKnown RBP7.04□□□□□ -1.28
VPS51YKR020W SAS4Q04003 481 aa6.99□□□□□ -1.29
VPS51YKR020W YPL062WQ02781 134 aa6.96□□□□□ -1.3
VPS51YKR020W YEL077CQ3E7X8 1277 aa6.96□□□□□ -1.3
VPS51YKR020W IFH1P39520 1085 aa6.92□□□□□ -1.3
VPS51YKR020W YLR326WQ06170 240 aaKnown RBP6.92□□□□□ -1.3
VPS51YKR020W UBP14P38237 781 aaKnown RBP6.9□□□□□ -1.3
VPS51YKR020W VHR2P40041 505 aa6.9□□□□□ -1.3
VPS51YKR020W MRF1P30775 413 aaPredicted RBP6.89□□□□□ -1.31
VPS51YKR020W PCS60P38137 543 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
VPS51YKR020W VPS70P47161 811 aa6.89□□□□□ -1.31
VPS51YKR020W YPR148CQ06523 435 aa6.86□□□□□ -1.31
VPS51YKR020W BUD20Q08004 166 aaPredicted RBP6.86□□□□□ -1.31
VPS51YKR020W RAD54P32863 898 aa6.85□□□□□ -1.31
VPS51YKR020W GAR1P28007 205 aaKnown RBP6.84□□□□□ -1.31
VPS51YKR020W AIR1P40507 360 aaKnown RBP6.84□□□□□ -1.31
VPS51YKR020W BRE2P43132 505 aa6.84□□□□□ -1.31
VPS51YKR020W PRT1P06103 763 aaKnown RBP6.83□□□□□ -1.32
VPS51YKR020W RPP1BP10622 106 aaKnown RBP6.83□□□□□ -1.32
VPS51YKR020W GBP2P25555 427 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
VPS51YKR020W YRR1Q12172 810 aa6.81□□□□□ -1.32
VPS51YKR020W ERG12P07277 443 aa6.8□□□□□ -1.32
VPS51YKR020W STR2P47164 639 aa6.8□□□□□ -1.32
VPS51YKR020W CLA4P48562 842 aa6.8□□□□□ -1.32
VPS51YKR020W CST6P40535 587 aa6.79□□□□□ -1.32
VPS51YKR020W SAS10Q12136 610 aaPredicted RBP6.79□□□□□ -1.32
VPS51YKR020W ISM1P48526 1002 aa6.78□□□□□ -1.32
VPS51YKR020W GCR2Q01722 534 aa6.78□□□□□ -1.32
VPS51YKR020W REF2P42073 533 aaPredicted RBP6.77□□□□□ -1.33
VPS51YKR020W PEX21P50091 288 aa6.77□□□□□ -1.33
VPS51YKR020W CKB1P43639 278 aa6.74□□□□□ -1.33
VPS51YKR020W NUD1P32336 851 aa6.73□□□□□ -1.33
VPS51YKR020W KIC1P38692 1080 aa6.73□□□□□ -1.33
VPS51YKR020W YDR090CQ03193 310 aa6.72□□□□□ -1.33
VPS51YKR020W LAM6Q08001 693 aa6.71□□□□□ -1.34
VPS51YKR020W TUM1Q08686 304 aaKnown RBP6.71□□□□□ -1.34
VPS51YKR020W GAP1P19145 602 aaPredicted RBP6.69□□□□□ -1.34
VPS51YKR020W FRK1Q03002 865 aaPredicted RBP6.69□□□□□ -1.34
VPS51YKR020W PBS2P08018 668 aa6.68□□□□□ -1.34
VPS51YKR020W GCD11P32481 527 aaKnown RBP6.68□□□□□ -1.34
VPS51YKR020W NPL4P33755 580 aa6.68□□□□□ -1.34
VPS51YKR020W TY1A-DR4O74302 440 aa6.67□□□□□ -1.34
VPS51YKR020W TY1A-HP0C2I4 478 aaKnown RBP6.67□□□□□ -1.34
VPS51YKR020W TY1A-AP0CX57 440 aa6.67□□□□□ -1.34
VPS51YKR020W TY1A-PR1P0CX58 440 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms